EBG00000313325 - n.651T>G
Drug resistance types
12 Sensitive
40 RR-TB
9 HR-TB
29 MDR-TB
12 Pre-XDR-TB
1 XDR-TB
63 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 3 |
| lineage4.2.1.1 | 2 |
| lineage4.8 | 40 |
| lineage4.9 | 30 |
| lineage2.2.1 | 27 |
| lineage3.1.2 | 1 |
| lineage4.4.2 | 4 |
| lineage4.1.1.3 | 3 |
| lineage2.2.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.1.2.1 | 2 |
| lineage4.2.1 | 4 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.1.2 | 2 |
| lineage3;lineage4 | 2 |
| lineage4.2.2 | 1 |
| lineage3 | 3 |
| lineage3.1.1 | 3 |
| lineage4.4.1.1.1 | 1 |
| La1.3 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage2;lineage4 | 1 |
| La1.8.1 | 2 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.3;lineage4.9 | 1 |
| La2 | 1 |
| lineage4.6.1.2 | 3 |
| La1.7.1 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.3.4.1 | 3 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.5 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 166 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR1180446 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR2027250 | Other | lineage3.1.2 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046839 | Other | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR3675552 | Other | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR867573 | Other | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | DRR188816 | Other | lineage4.2.2 | None | ERR978735 | Other | lineage4.8 | None | ERR978762 | Other | lineage4.8 | None | SRR6045002 | RR-TB | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR978727 | Other | lineage4.8 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | SAMEA3450033 | Other | lineage4.8 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR5818411 | RR-TB | lineage4.9 | None | ERR867544 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR867567 | RR-TB | lineage3 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR978752 | Other | lineage4.8 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | SRR1184329 | Other | lineage4.9 | None | ERR4769517 | Other | La1.3 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR1023509 | MDR-TB | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR978761 | Other | lineage4.8 | None | SRR1792022 | Other | La1.8.1 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR978755 | RR-TB | lineage4.8 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR978694 | Other | lineage4.8 | None | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181256 | Other | lineage4.9 | None | ERR978747 | Other | lineage4.8 | None | SRR5818429 | Sensitive | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR13888750 | Other | La2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR21469200 | Other | La1.7.1 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR5818460 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR978751 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | DRR184982 | Other | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | DRR185000 | Other | lineage1.1.1.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | ERR911929 | Other | lineage4.8 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1173185 | Other | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | DRR034348 | Other | lineage2.2.1 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR1196478 | Other | lineage4.9 | None | SRR21469202 | Other | La1.7.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR978756 | Other | lineage4.8 | None | SRR1180440 | Other | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | ERR5162090 | RR-TB | lineage4.9 | None | ERR3806588 | Other | lineage6.1.3 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR867575 | Other | lineage4.9 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR867574 | Other | lineage4.9 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR978748 | Other | lineage4.8 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR4821811 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR911930 | Other | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR4769436 | Other | La1.3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR1173281 | Other | lineage3 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR978734 | RR-TB | lineage4.8 | None |
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