EBG00000313325 - n.651T>G
Drug resistance types
21 Sensitive
42 RR-TB
15 HR-TB
41 MDR-TB
16 Pre-XDR-TB
1 XDR-TB
104 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.1 | 6 |
| lineage4.4.2 | 5 |
| La2 | 1 |
| lineage4.2.1 | 4 |
| lineage2.2.1 | 37 |
| lineage4.3.3 | 6 |
| lineage4.8 | 17 |
| lineage4.9 | 42 |
| La1.8.1 | 4 |
| lineage4.2.2.1 | 1 |
| lineage3 | 19 |
| lineage4.1.1.3 | 3 |
| lineage2.2.1.1 | 2 |
| lineage6 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.4.1.1 | 4 |
| lineage4 | 7 |
| La1.7.1 | 3 |
| lineage1.1.2 | 4 |
| lineage2.2 | 3 |
| lineage4.1.2.1 | 8 |
| lineage4.3.2.1 | 2 |
| lineage4.3.4.2.1 | 3 |
| 7 | |
| lineage3.1.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.1.2 | 2 |
| lineage3.1 | 1 |
| lineage4.6.1.2 | 6 |
| lineage4.5 | 1 |
| lineage2.2.2 | 2 |
| lineage3.1.2.1 | 2 |
| lineage4.1.1 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage1.2.2.2 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.8.2 | 1 |
| lineage4.7 | 2 |
| lineage4.3.1.1 | 2 |
| lineage4.3.1 | 1 |
| lineage4.6.5 | 1 |
| lineage4.2.1.1 | 2 |
| lineage4.3.4.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.2.2 | 1 |
| lineage4.3.2 | 2 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.3 | 4 |
| lineage4.6 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 240 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR13888750 | Other | La2 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR16157123 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR16149133 | MDR-TB | lineage4.2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR1792022 | Other | La1.8.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18213721 | Other | lineage4.8 | None | SRR18213726 | Other | lineage3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19304094 | Other | lineage6 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR2101637 | RR-TB | lineage4.4.1.1 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR21469200 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR22424743 | Pre-XDR-TB | lineage1.1.2 | None | SRR21469201 | Other | La1.7.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR6207283 | Sensitive | lineage4.3.3 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4815777 | Other | lineage4.9 | None | ERR4815613 | Other | lineage3 | None | SRR3675230 | RR-TB | lineage3 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814699 | HR-TB | lineage4.1.2.1 | gb | ERR4814748 | Other | lineage4.8 | None | ERR1750926 | Other | lineage4.3.2.1 | za | SRR2024953 | MDR-TB | lineage2.2.1 | cn | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR5818419 | Sensitive | None | ERR2027250 | Other | lineage3.1.2 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR4815994 | Other | lineage3 | gb | SRR3675552 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027256 | Other | lineage4.1.2 | None | ERR4816183 | Other | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | SRR3675565 | Other | lineage3 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4816548 | MDR-TB | lineage4.5 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | SRR5818426 | Other | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR4033523 | Other | lineage2.2 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4817555 | RR-TB | lineage3 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR2432997 | Other | lineage4.8 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4819456 | Other | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819217 | Other | lineage1.2.2.2 | None | SRR5818458 | Other | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4820889 | Other | lineage3 | gb | ERR4819784 | Other | lineage4.1.2.1 | None | ERR2514565 | Other | lineage3.1.2.1 | gb | ERR4820484 | Other | lineage4.8 | None | ERR4821214 | RR-TB | None | ERR1023509 | Other | None | ERR2515007 | Other | lineage3 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821981 | Other | lineage4.1.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR5818411 | MDR-TB | lineage4.9 | None | SRR5818402 | Other | lineage4.9 | None | SRR5818404 | Other | lineage4.9 | None | SRR5818421 | Sensitive | lineage4.9 | None | SRR5818430 | Sensitive | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818410 | Sensitive | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR5818460 | Other | lineage4.9 | None | SRR6045759 | RR-TB | lineage2.2.1 | gb | SRR6046159 | Other | lineage4.8.2 | None | SRR6044936 | Other | lineage4 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046246 | Other | lineage3 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR6046376 | Other | lineage3 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR2851359 | Other | lineage4.9 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046818 | Other | lineage4.2.1 | gb | SRR6046839 | Other | lineage4.9 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046815 | Other | lineage3 | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR6982246 | Sensitive | lineage4 | None | ERR2984792 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR5087846 | Other | La1.8.1 | None | SRR7131125 | Other | lineage2.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7131221 | Other | lineage4.6.2.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | DRR034348 | Other | lineage2.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | DRR185000 | Other | lineage1.1.1.1 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR036207 | Other | lineage4.9 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR3806588 | Other | lineage6 | None | ERR10796594 | Other | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR4769436 | Other | La1.3 | None | ERR4187652 | Other | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769453 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769517 | Other | La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR9117704 | Other | lineage4.6 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117788 | Other | lineage3 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR987695 | HR-TB | lineage4.3.4.2 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1180446 | Other | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173740 | Other | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1180440 | Other | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
