EBG00000313339 - n.1060_1061insGTGAG
Drug resistance types
18 Sensitive
15 RR-TB
8 HR-TB
18 MDR-TB
12 Pre-XDR-TB
2 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 23 |
| La1.8.1 | 5 |
| lineage4.9 | 17 |
| lineage2.2.2 | 4 |
| lineage4.4.2 | 3 |
| lineage4.1.1.3 | 4 |
| lineage3 | 9 |
| lineage3.1.1 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.3.3 | 3 |
| lineage4.6.1.2 | 4 |
| La1.7.1 | 2 |
| lineage4 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3;lineage4 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage4.8 | 3 |
| lineage4.7 | 1 |
| lineage4.2.1 | 2 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
| La1.3 | 1 |
| lineage6.1.2 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.1.2.1 | 4 |
| lineage5.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 106 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR1792011 | Other | La1.8.1 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR2446509 | Other | lineage3 | nl | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR4821811 | Sensitive | lineage4.9 | None | SRR6982141 | Other | lineage4.3.3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816470 | HR-TB | lineage3 | None | SRR21469200 | Other | La1.7.1 | None | SRR7496471 | Sensitive | lineage4 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR5311077 | Other | La1.8.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7496523 | Other | lineage4.7 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR4769423 | Other | La1.3 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR9786613 | Sensitive | lineage4.1.2.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR4796351 | Sensitive | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR867555 | Other | lineage3 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR3275190 | Other | lineage3 | nl | DRR184982 | Other | lineage2.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR3468488 | Other | La1.8.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | ERR1023509 | MDR-TB | lineage4.9 | None | SRR21469202 | Other | La1.7.1 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | SRR19303899 | Other | lineage3 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR6046839 | Other | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR3283046 | Sensitive | lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR2513259 | Other | lineage3 | None | ERR3439489 | RR-TB | La1.8.1 | None | SRR16058249 | Sensitive | lineage4.2.2.2 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4816762 | Sensitive | lineage4.9 | None | ERR2517074 | Pre-XDR-TB | lineage3 | gb | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR1184308 | RR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173281 | Other | lineage3 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | ERR4811101 | Other | lineage4.4.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None |
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