EBG00000313325 - n.828T>G


Drug resistance types
15 Sensitive 54 RR-TB 23 HR-TB 46 MDR-TB 29 Pre-XDR-TB 3 XDR-TB 175 Other
lineage Counts
lineage Count
lineage4.8 61
lineage2.2.1 68
lineage4.3.3 14
lineage4.1.1.3.1 2
lineage4.5 3
lineage4.1.2.1 17
lineage1.1.3.2 2
lineage3.1.1;lineage4.9 1
lineage4.4.1.1 7
lineage3 10
lineage4.2.2.2 3
lineage4.8.1 1
lineage4.9 42
lineage4.3.4.2 2
lineage4.1.4 1
lineage4.6.1.1 1
lineage4.3.4.1 3
lineage3.1.1 4
lineage2.2.1.1 3
lineage4.4.1.1.1 5
lineage4.1.1.1 3
lineage4.6.1.2 3
lineage6.2.3 1
lineage1.2.1.2 2
lineage2.2.2 3
lineage2.2.1.2 1
lineage4.7 4
La3 1
lineage4.2.1 4
La1.8.1 11
lineage4.3.3;lineage4.8 3
lineage4.2.1.1 4
lineage4.3 2
lineage6.1.2 1
lineage2.2;lineage4.9 1
lineage2.2.1;lineage4.9 2
lineage4.1.1.2 1
lineage6.1.3 3
lineage4.1.1.3 9
La2 1
lineage4.2.2 1
lineage4.3.2 2
lineage4.4.2 4
lineage4.1.2 2
lineage4.3.2.1 3
La1.7.1 2
lineage2.2.1;lineage4.8 1
La1.3 1
lineage4.3.1.1 1
lineage2.2;lineage4 1
lineage4 2
lineage4.3;lineage4.9 1
lineage1.2.2.2 1
lineage4.4.1.2 3
lineage1.1.2;lineage6.2.3 1
lineage4.3.4.2.1 1
lineage4.1;lineage4.9 1
lineage1.1.3 1
lineage3.1.2 1
lineage4.6.2.2 1
lineage2.2.1;lineage4 1
lineage4.8;lineage4.9 1
lineage4.4 1
lineage3.1.2;lineage4.1.1.3.1 1
spoligotype Counts
spoligotype Count
None 345
Geographic prevalence
Country level data for this variant is available for 16 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR911930 Other lineage4.8 None
SRR21279393 Sensitive lineage2.2.1 None
SRR7131098 MDR-TB lineage4.3.3 None
SRR6044873 Other lineage4.1.1.3.1 None
ERR4815816 Other lineage4.5 gb
SRR11972417 MDR-TB lineage2.2.1 None
SRR5007204 Other lineage4.1.2.1 None
ERR4819867 Other lineage1.1.3.2 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR6397815 Other lineage4.4.1.1 None
ERR5979407 Other lineage3 None
SRR023487 RR-TB lineage2.2.1 None
SRR11349149 RR-TB lineage2.2.1 None
ERR4815040 Other lineage4.2.2.2 None
SRR6045325 Other lineage4.8.1 gb
SRR7131149 Pre-XDR-TB lineage4.8 None
ERR2514801 Other lineage1.1.3.2 gb
SRR1172885 HR-TB lineage4.9 None
SRR8651662 Pre-XDR-TB lineage2.2.1 None
ERR10395965 MDR-TB lineage4.3.4.2 None
SRR13180370 Other lineage4.1.4 None
SRR9971112 HR-TB lineage2.2.1 None
SRR1019127 Other lineage4.9 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR15508556 Other lineage4.3.4.1 None
SAMEA3501067 RR-TB lineage4.8 None
SRR3675513 Other lineage4.8 None
SRR5818385 Other lineage4.9 None
ERR9285979 RR-TB lineage3.1.1 None
SRR7070482 Other lineage4.1.2.1 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR9971065 RR-TB lineage2.2.1 None
SRR18003052 Other lineage2.2.1.1 None
SRR10869254 Pre-XDR-TB lineage2.2.1 None
ERR911929 Other lineage4.8 None
SRR1184329 Other lineage4.9 None
SRR12062533 Pre-XDR-TB lineage2.2.1.1 None
SRR18002980 Other lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR978746 RR-TB lineage4.8 None
ERR978750 RR-TB lineage4.8 None
SRR9971197 MDR-TB lineage4.4.1.1.1 None
SRR11349208 MDR-TB lineage2.2.1 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR18003045 Other lineage2.2.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
ERR4816403 Other lineage6.2.3 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR14801720 Other lineage4.8 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR10214505 Sensitive lineage1.2.1.2 None
SRR11349138 MDR-TB lineage4.4.1.1.1 None
SAMEA3501070 RR-TB lineage4.8 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR1175304 HR-TB lineage4.3.3 None
SRR9971029 MDR-TB lineage2.2.2 None
SRR7069430 Other lineage3.1.1 None
ERR978761 Other lineage4.8 None
SRR3675225 Other lineage2.2.1.2 None
ERR10219868 Other lineage4.1.2.1 None
SRR7496523 Other lineage4.7 None
SRR3675538 Other lineage4.8 None
SAMEA3501052 RR-TB lineage4.8 None
SRR6045962 Other La3 gb
SRR11349207 RR-TB lineage2.2.1 None
ERR10762297 MDR-TB lineage4.2.1 None
SRR1792022 Other La1.8.1 None
SRR1049675 HR-TB lineage2.2.1 None
SRR6044952 Other lineage4.9 None
ERR9027228 Pre-XDR-TB lineage2.2.1 None
SRR21239801 Sensitive lineage4.1.2.1 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR1181403 Other lineage4.9 None
SRR5818422 Other lineage4.9 None
ERR978756 Other lineage4.8 None
SRR1180440 Other lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR10796625 Other lineage4.4.1.1 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR21240055 Other lineage4.1.2.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR978694_ERR978693 Other lineage4.8 None
ERR978747 Other lineage4.8 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR5007203 Other lineage2.2.1 None
SRR6397640 Other lineage4.2.1.1 None
ERR978726 RR-TB lineage4.8 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR9907760 Pre-XDR-TB lineage4.3 None
ERR983238 MDR-TB lineage2.2.1.1 None
ERR978757 RR-TB lineage4.8 None
ERR9787033 Sensitive lineage6.1.2 None
ERR3275941 RR-TB lineage4.3 nl
SRR10869071 MDR-TB lineage2.2.1 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR4815419 Other lineage4.8 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
ERR8975044 Other lineage4.1.1.2 None
ERR4192419 Other lineage6.1.3 None
ERR978762 Other lineage4.8 None
SRR6045045 Other lineage2.2.1 None
ERR978748 Other lineage4.8 None
SRR9970996 XDR-TB lineage4.4.1.1 None
ERR970449 RR-TB lineage4.1.1.3 None
SRR6824501 Pre-XDR-TB lineage2.2.1 None
SRR6152980 HR-TB lineage4.8 ca
SRR19304104 Other lineage4.8 None
ERR4816548 HR-TB lineage4.5 None
SRR6398097 Other lineage4.2.1.1 ca
ERR5917985 MDR-TB lineage2.2.1 None
SRR13888750 Other La2 None
ERR5979454 Pre-XDR-TB lineage3 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR1175052 HR-TB lineage4.9 None
SRR11342684 HR-TB lineage4.4.1.1 None
SRR7645928 Other lineage4.7 None
SRR20970048 Other lineage4.2.2 None
ERR4972567 MDR-TB lineage4.3.2 None
ERR4796351 Sensitive lineage4.9 None
SRR7645906 Other lineage2.2.1 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR7645899 Other lineage2.2.1 None
SRR1175474 Other lineage4.9 None
ERR978693 Other lineage4.8 None
SRR1792025 Other La1.8.1 None
ERR5311077 Other La1.8.1 None
ERR9117780 Sensitive lineage4.1.2.1 None
SAMEA3501063 RR-TB lineage4.8 None
ERR4192398 Other lineage6.1.3 None
SRR11342648 MDR-TB lineage4.1.1.3 None
SRR6046189 Other lineage4.8 None
ERR4821704 Other lineage4.3.3 None
SRR8651655 Pre-XDR-TB lineage2.2.1 cn
ERR2229366 Other lineage4.8 None
DRR034458 Other lineage2.2.2 None
SRR7236399 Other La1.8.1 None
SRR10726045 MDR-TB lineage4.3.3 None
SRR1173421 Other lineage4.9 None
ERR2512423 Other lineage4.1.1.3 None
ERR10796597 Other lineage4.3.3 None
SRR10614047 Sensitive lineage4.9 None
SRR7131145 Other lineage4.1.2.1 None
ERR10796589 Other lineage4.9 None
SRR18003024 RR-TB lineage2.2.1 None
SRR13423546 Other lineage4.4.2 None
SRR4033549 Other lineage2.2.2 None
SRR19303903 Other lineage2.2.1 None
SRR3675389 Other lineage4.9 None
ERR270777 HR-TB lineage4.1.2 None
SRR5818409 Other lineage4.9 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR6785281 Other lineage4.2.1.1 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SRR7069880 MDR-TB lineage3 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1196478 Other lineage4.9 None
SRR21469202 Other La1.7.1 None
ERR3283006 RR-TB lineage4.9 None
SRR1792011 Other La1.8.1 None
ERR10796566 Other lineage4.9 None
ERR978754 RR-TB lineage4.8 None
SRR1173833 Other lineage4.9 None
SRR7069199 Other lineage4.8 None
ERR978760 RR-TB lineage4.8 None
SRR1173521 Other lineage4.9 None
SRR6046442 Other lineage3 None
SRR7070157 Other lineage4.1.1.3.1 None
ERR108125 RR-TB lineage4.9 None
SRR5818440 Other lineage4.9 None
SRR21240103 Other lineage4.1.2.1 None
SRR18572455 Sensitive lineage4.9 None
SAMEA3501065 RR-TB lineage4.8 None
SRR19303964 Other lineage4.7 None
SRR11349148 RR-TB lineage2.2.1 None
SRR13180325 HR-TB lineage4.3.4.2 None
ERR10762275 MDR-TB lineage4.2.1 None
SRR9971114 Other lineage2.2.1 None
ERR978755 RR-TB lineage4.8 None
SRR7069754 Other lineage4.3.2 None
ERR2513382 RR-TB lineage4.1.1.3 None
ERR2600562 MDR-TB lineage2.2.1;lineage4.8 None
ERR4820187 Other lineage4.3.3 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR1172816 MDR-TB lineage4.3.3 None
SRR16156697 RR-TB lineage2.2.1 None
ERR3468613 Other La1.8.1 None
SRR18002974 Other lineage2.2.1 None
SRR7131147 Other lineage4.1.2.1 None
ERR4769554 RR-TB lineage4.9 None
SRR16156804 Sensitive lineage4.9 None
SRR7755655 Other lineage4.1.2.1 None
SRR15316595 RR-TB lineage4.4.2 None
SRR7069802 Other lineage3 None
SRR7131229 Other lineage4.1.2.1 None
SRR3675220 Pre-XDR-TB lineage2.2.1 None
ERR4828879 HR-TB lineage3 None
SRR6046117 Other lineage4.9 None
ERR3276155 Other lineage4.1.2.1 nl
SAMEA3501015 Other lineage4.8 None
SRR21239946 Other lineage4.1.2.1 None
ERR4769423 Other La1.3 None
SRR7070469 Other lineage4.3.1.1 None
SRR11972369 Pre-XDR-TB lineage2.2.1 None
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR3439489 RR-TB La1.8.1 None
SRR14782539 MDR-TB lineage4.2.1 None
ERR10796556 Other lineage4.3.4.1 None
ERR2228838 Other lineage4.8 None
ERR2513405 Other lineage2.2.1 None
SRR22048392 Other lineage4.8 None
SRR7236134 Other La1.8.1 None
SRR5163959 Other lineage4.9 None
ERR978735 Other lineage4.8 None
SRR6855774 Other lineage2.2.1 None
ERR4132460 MDR-TB lineage2.2.1 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR5818423 RR-TB lineage4.9 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
ERR2229198 Sensitive lineage4.8 None
SRR20969542 Other lineage4.4.2 None
SRR15315797 RR-TB lineage2.2.1 None
ERR10796568 Other lineage4.9 None
SRR023450 RR-TB lineage2.2.1 None
ERR5087846 Other La1.8.1 None
ERR4812328 Other lineage4.3.3 pe
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR6982141 Other lineage4.3.3 None
SRR18003009 MDR-TB lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
ERR10796592 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR7496471 Sensitive lineage4 None
SRR7131061 Other lineage2.2.1 None
SRR10380127 Other lineage4.3.3 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR11349175 Other lineage2.2.1 None
SRR5818684 Other lineage4.2.2.2 None
SAMEA3450033 Other lineage4.8 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
SRR1173113 Other lineage4.3;lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR10796594 Other lineage4.9 None
SAMN02585982 MDR-TB lineage4.3.3 None
SRR20969475 Other lineage1.2.1.2 None
SRR3675256 Other lineage4.7 None
ERR3014599 Pre-XDR-TB lineage4.1.2.1 tn
ERR978751 Other lineage4.8 None
SRR12062547 HR-TB lineage2.2.1 None
SRR13180301 HR-TB lineage3 None
ERR10762495 MDR-TB lineage2.2.1 None
ERR2229541 Other lineage4.8 None
ERR736816 Other lineage4.9 None
SRR7068939 Other lineage4.2.2.2 None
SRR5818672 Other lineage1.2.2.2 None
ERR10796560 Other lineage4.9 None
ERR2228910 Other lineage4.8 None
ERR4800095 Pre-XDR-TB lineage2.2.1 None
SRR18002929 HR-TB lineage2.2.1 None
ERR2600422 MDR-TB lineage2.2.1 None
ERR3797062 RR-TB lineage4.9 None
ERR2228899 Other lineage4.8 None
ERR2228900 Other lineage4.8 None
SRR7236330 Other La1.8.1 None
SRR11349189 MDR-TB lineage4.1.1.1 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR978752 Other lineage4.8 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
SRR5007182 MDR-TB lineage3 None
SRR9971046 MDR-TB lineage4.8 None
SRR11349201 MDR-TB lineage4.1.1.3 None
SRR11349153 RR-TB lineage4.1.1.1 None
SRR5818610 Other lineage3 None
ERR4821849 Other lineage4.5 gb
ERR978734 RR-TB lineage4.8 None
ERR4830549 MDR-TB lineage4.1.1.3 None
SRR1173310 Other lineage3.1.1 None
SRR9971122 MDR-TB lineage4.8 None
SRR21686597 Sensitive lineage4.1.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR6045191 Sensitive lineage4.9 None
SRR7068919 Sensitive lineage4.4.1.1 None
ERR2229147 Other lineage4.8 None
ERR978726_ERR978727 RR-TB lineage4.8 None
ERR867519 Other lineage4.3.3 None
SRR15368722 Pre-XDR-TB lineage2.2.1 None
SRR5007165 Other lineage3 None
SRR1180446 Other lineage4.9 None
DRR034348 Other lineage2.2.1 None
SRR6045621 Other lineage4.1.1.3 None
ERR10796629 Other lineage4.1;lineage4.9 None
SRR10315674 MDR-TB lineage2.2.1 None
SRR21240077 Other lineage4.1.2.1 None
SRR18003048 XDR-TB lineage2.2.1 None
SRR7069523 Other lineage1.1.3 None
ERR2027250 Other lineage3.1.2 None
SRR18002987 Other lineage2.2.1 None
SAMEA3501046 RR-TB lineage4.8 None
SRR11349185 Other lineage4.4.1.1.1 None
SRR6397733 Other lineage4.4.1.2 None
ERR978733 RR-TB lineage4.8 None
SRR3675441 RR-TB lineage4.9 None
ERR4814497 HR-TB lineage4.6.2.2 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
ERR911929_ERR911930 Other lineage4.8 None
ERR2851354 Other lineage4.9 None
ERR978694 Other lineage4.8 None
SRR17567917 RR-TB lineage4.4.1.1 None
ERR4192556 Other lineage6.1.3 None
SRR1181256 Other lineage4.9 None
SRR6397579 Other lineage4.4.1.2 ca
ERR4821085 Other lineage2.2.1 None
SRR3675265 Other lineage4 None
ERR2229436 Other lineage4.8 None
SRR1140942 Other lineage2.2.1;lineage4 None
SRR7070170 Sensitive lineage4.8 None
ERR2228810 Other lineage4.8;lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR9970980 HR-TB lineage4.1.2 None
ERR2229811 Other lineage4.8 dk
ERR9907785 RR-TB lineage4.3.2.1 None
ERR2984782 Pre-XDR-TB lineage4.3.3 None
SRR21727760 Other lineage2.2.1 None
SRR11349137 RR-TB lineage4.4.1.1.1 None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
SRR10315499 MDR-TB lineage2.2.1 None
SRR16627752 RR-TB lineage4.4 None
ERR5087596 Other La1.8.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR6045052 HR-TB lineage4.2.1.1 None
ERR978727 Other lineage4.8 None
SRR6153170 Other lineage4.9 ca
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR21469200 Other La1.7.1 None
ERR2514430 Other lineage3.1.2;lineage4.1.1.3.1 None