lineage | Count |
---|---|
lineage4.8 | 7 |
lineage4.6.5 | 2 |
lineage2.2.1.1 | 1 |
lineage2.2;lineage4.9 | 1 |
lineage4.9 | 4 |
lineage4.6.1.2 | 4 |
La1.3 | 1 |
La1.8.1 | 3 |
lineage4.4.1.2 | 1 |
lineage1.1.2;lineage6.2.3 | 1 |
lineage4.1.1.3 | 1 |
La1.2 | 1 |
lineage2.2.1;lineage4.9 | 1 |
lineage4.3.2.1 | 1 |
lineage2.2.1 | 5 |
La1.7.1 | 1 |
lineage4.6.1.1 | 1 |
lineage4.9.1 | 1 |
spoligotype | Count |
---|---|
None | 37 |
ID | Drug resistance | Lineage | Country iso2 | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR2229234 | Sensitive | lineage4.8 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR4769495 | Other | La1.3 | None | ERR5311077 | Other | La1.8.1 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR4769418 | Other | La1.2 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | ERR3468613 | Other | La1.8.1 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR3468488 | Other | La1.8.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR21469202 | Other | La1.7.1 | None | ERR4819910 | Sensitive | lineage4.9 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR037504 | Other | lineage4.9.1 | None | ERR978765 | RR-TB | lineage4.8 | None |
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