EBG00000313325 - n.842A>T


Drug resistance types
28 Sensitive 61 RR-TB 19 HR-TB 38 MDR-TB 15 Pre-XDR-TB 2 XDR-TB 156 Other
lineage Counts
lineage Count
lineage2.2.1 40
lineage3.1.2.1 2
lineage3;lineage4 3
lineage4.8 67
lineage4.9 49
lineage4.3.4.1 7
lineage4.3.2.1 4
lineage3 14
lineage4.6.1.1 1
lineage4.3.4.1;lineage4.9 1
La1.7.X-unk4 1
lineage4.1.2.1 12
lineage1.1.1 1
lineage4.1.2 4
lineage1.1.3.2 2
lineage4.6.1.2 3
lineage4.3.4.2.1 1
lineage4.2.1.1 1
lineage1.2.1.2 2
lineage2;lineage4 1
La1.7.1 2
lineage4.7 2
lineage4.2.1 6
La1.8.1 8
lineage4.3.3 3
lineage4.3.3;lineage4.8 3
lineage6.3.2 1
lineage4.4.1.1 7
lineage3.1.3 1
lineage4.3.2 4
lineage4.4.1.1.1 1
lineage4.8;lineage4.9 1
lineage6.1.3 1
La1.7;lineage2.2.1 1
lineage4.1.1.3 11
lineage4.1.1.3.1 1
lineage4.2.2 3
lineage1.2.2.1 1
lineage4.4.2 4
lineage4.1.1.1 3
lineage4.5 2
lineage6.2.3 1
La1.3 3
La1.2 1
lineage4.2.2.2 5
lineage2.2.2 3
lineage4.4.1.2 2
lineage4.2.1.1;lineage4.3.3 2
lineage1.2.2.2 1
lineage2.2.1.1 2
lineage4.1.1.2 1
lineage4 1
lineage3.1.1 5
lineage1.1.2;lineage6.2.3 1
lineage3;lineage4.8 1
lineage1.2.1.1 2
lineage6.1.2 1
lineage2.2;lineage4 1
lineage4.3.4.2 2
lineage3.1.2;lineage4.1.1.3.1 1
lineage3.1.2.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 319
Geographic prevalence
Country level data for this variant is available for 15 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR7070195 Sensitive lineage3.1.2.1 None
SRR18002985 HR-TB lineage2.2.1 None
SRR1173740 Other lineage3;lineage4 None
ERR978751 Other lineage4.8 None
SAMEA3501063 RR-TB lineage4.8 None
ERR2229541 Other lineage4.8 None
ERR736816 Other lineage4.9 None
ERR10796582 Other lineage4.3.4.1 None
ERR2515818 Other lineage4.3.2.1 za
SRR1172885 HR-TB lineage4.9 None
SRR18213726 Other lineage3 None
SRR9971112 HR-TB lineage2.2.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR1173421 Other lineage4.9 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR10796558 Sensitive lineage4.3.4.1;lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
ERR3445487 Other La1.7.X-unk4 None
SRR7069216 Other lineage4.1.2.1 None
ERR978752 Other lineage4.8 None
SRR21658550 Other lineage1.1.1 None
ERR270777 HR-TB lineage4.1.2 None
ERR7821182 Other lineage1.1.3.2 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR978746 RR-TB lineage4.8 None
SRR1062880 MDR-TB lineage4.6.1.2 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR6045191 Sensitive lineage4.9 None
SRR6785281 Other lineage4.2.1.1 None
SRR14801720 Other lineage4.8 None
SRR10214505 Sensitive lineage1.2.1.2 None
ERR1023509 MDR-TB lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
ERR3283008 Other lineage4.9 None
SRR21469202 Other La1.7.1 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR3283006 RR-TB lineage4.9 None
SRR18002947 MDR-TB lineage2.2.1 None
ERR978761 Other lineage4.8 None
SRR7496523 Other lineage4.7 None
ERR108125 RR-TB lineage4.9 None
ERR10762297 MDR-TB lineage4.2.1 None
SRR1792022 Other La1.8.1 None
SRR22048536 Other lineage4.3.3 None
ERR978733 RR-TB lineage4.8 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR5818430 Sensitive lineage4.9 None
SRR1181403 Other lineage4.9 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
SRR5818400 Other lineage4.9 None
ERR978694 Other lineage4.8 None
ERR5336160 Other lineage6.3.2 None
SRR17567917 RR-TB lineage4.4.1.1 None
ERR2027291 Sensitive lineage3.1.3 None
SRR1180440 Other lineage4.9 None
SRR5818394 Other lineage4.9 None
ERR10796561 Other lineage4.3.2 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR1181256 Other lineage4.9 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR16156697 RR-TB lineage2.2.1 None
SRR5818429 Sensitive lineage4.9 None
ERR2228810 Other lineage4.8;lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR7070596 Other lineage4.8 None
SRR3675552 Other lineage4.9 None
SRR14802219 Other lineage4.8 None
ERR3806588 Other lineage6.1.3 None
SRR20969923 Other La1.7;lineage2.2.1 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR9971017 HR-TB lineage2.2.1 None
ERR867575 Other lineage4.9 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR11972369 Pre-XDR-TB lineage2.2.1 None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR14782539 MDR-TB lineage4.2.1 None
ERR2228838 Other lineage4.8 None
ERR4769508 RR-TB lineage4.9 None
SRR7236134 Other La1.8.1 None
SRR7069687 Other lineage4.1.1.3.1 None
DRR188816 Other lineage4.2.2 None
SRR5163959 Other lineage4.9 None
SRR11349151 MDR-TB lineage2.2.1 None
ERR978735 Other lineage4.8 None
ERR978762 Other lineage4.8 None
ERR2660505 Other lineage1.2.2.1 None
SRR7069164 Other lineage4.8 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR978748 Other lineage4.8 None
ERR978765 RR-TB lineage4.8 None
SRR20969542 Other lineage4.4.2 None
ERR970449 RR-TB lineage4.1.1.3 None
SRR15315797 RR-TB lineage2.2.1 None
ERR867554 Other lineage4.3.4.1 None
ERR867554 Other lineage4.3.4.1 None
SRR6152980 HR-TB lineage4.8 ca
SRR023450 RR-TB lineage2.2.1 None
ERR978727 Other lineage4.8 None
SRR5818426 Other lineage4.9 None
ERR3261351 Other lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR21469200 Other La1.7.1 None
SRR1175052 HR-TB lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR9117725 Other lineage4.1.1.1 None
ERR4796351 Sensitive lineage4.9 None
SAMEA3450033 Other lineage4.8 None
ERR4815816 Other lineage4.5 gb
ERR978693 Other lineage4.8 None
SRR1792025 Other La1.8.1 None
ERR2516042 Other lineage4.1.1.3 za
ERR2027253 Other lineage6.2.3 None
SRR20969475 Other lineage1.2.1.2 None
ERR3275190 Other lineage3 nl
SRR5818464 Other lineage4.9 None
ERR4769495 Other La1.3 None
ERR4769436 Other La1.3 None
SRR20969951 Other lineage4.4.2 None
ERR2514801 Other lineage1.1.3.2 gb
SRR5818424 Sensitive lineage4.9 None
SRR6824324 Other lineage4.5 None
ERR2228910 Other lineage4.8 None
ERR978766 RR-TB lineage4.8 None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR15508556 Other lineage4.3.4.1 None
ERR2228899 Other lineage4.8 None
ERR2228900 Other lineage4.8 None
ERR4769418 Other La1.2 None
ERR867538 Other lineage4.2.2.2 None
ERR867538 Other lineage4.2.2.2 None
ERR10796552 Sensitive lineage4.3.4.1 None
ERR2886463 Sensitive lineage2.2.1 None
SRR5818408 Other lineage4.9 None
SRR9971065 RR-TB lineage2.2.1 None
SRR13423546 Other lineage4.4.2 None
SRR11342658 RR-TB lineage4.1.2 None
ERR3275615 Sensitive lineage4.4.1.1 nl
SRR4033549 Other lineage2.2.2 None
SRR10315693 RR-TB lineage4.1.2 None
ERR978734 RR-TB lineage4.8 None
SRR7131201 Other lineage4.8 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR867520 Other lineage4.7 None
ERR2229147 Other lineage4.8 None
ERR978726_ERR978727 RR-TB lineage4.8 None
SAMEA3501070 RR-TB lineage4.8 None
SRR1180446 Other lineage4.9 None
DRR034348 Other lineage2.2.1 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR4818507 Other lineage4.1.2.1 None
ERR4818507 Other lineage4.1.2.1 None
ERR978754 RR-TB lineage4.8 None
SRR1173833 Other lineage4.9 None
ERR9992784 XDR-TB lineage2.2.2 None
SRR8600288 Other La1.8.1 None
SRR6397733 Other lineage4.4.1.2 None
ERR4808964 RR-TB lineage2.2.1 None
ERR10762275 MDR-TB lineage4.2.1 None
ERR978755 RR-TB lineage4.8 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR1735599 Other lineage1.2.2.2 None
ERR2513382 RR-TB lineage4.1.1.3 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
SRR6046815 Other lineage3 None
SRR6046815 Other lineage3 None
ERR978694_ERR978693 Other lineage4.8 None
SRR6046839 Other lineage4.9 None
ERR2229733 Other lineage4.8 dk
ERR6866241 Other lineage4.3.2 None
ERR10796599 Other lineage4.8 None
ERR4828879 HR-TB lineage3 None
SAMEA3501073 RR-TB lineage4.8 None
SRR14782113 Pre-XDR-TB lineage4.2.1 None
ERR983238 MDR-TB lineage2.2.1.1 None
SRR5818435 Sensitive lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR5908124 Other lineage4.8 None
ERR3439489 RR-TB La1.8.1 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
SRR6045267 RR-TB lineage4.8 None
SRR6045603 Other lineage4.1.1.3 None
SRR6045603 Other lineage4.1.1.3 None
SRR3675230 Other lineage3;lineage4 None
SRR3675230 Other lineage3;lineage4 None
SRR10315579 Other lineage2.2.1.1 None
ERR8975044 Other lineage4.1.1.2 None
ERR2851359 Other lineage4.9 None
ERR4132460 MDR-TB lineage2.2.1 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
ERR2229198 Sensitive lineage4.8 None
ERR3261359 Other lineage4.9 None
SRR6824501 Pre-XDR-TB lineage2.2.1 None
ERR5087846 Other La1.8.1 None
ERR867526 MDR-TB lineage2.2.1 None
SRR9971369 MDR-TB lineage4.1.1.3 None
SRR5818410 Sensitive lineage4.9 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR7496471 Sensitive lineage4 None
SRR2101627 Other lineage4.1.2.1 None
ERR867572 Other lineage4.9 None
SRR1175474 Other lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR6397815 Other lineage4.4.1.1 None
ERR867544 Other lineage4.9 None
SRR6046376 Other lineage3 None
SRR023487 RR-TB lineage2.2.1 None
ERR9117788 Other lineage3 None
ERR10762495 MDR-TB lineage2.2.1 None
ERR978767 RR-TB lineage4.8 None
ERR2229366 Other lineage4.8 None
ERR9786452 Other lineage4.3.2 None
SRR5818437 RR-TB lineage4.9 None
SRR1173281 Other lineage3 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR2512423 Other lineage4.1.1.3 None
ERR10796636 Other lineage4.1.2.1 None
ERR3261389 Other lineage4.9 None
ERR9285979 RR-TB lineage3.1.1 None
SRR10614047 Sensitive lineage4.9 None
SRR12634609 MDR-TB lineage3.1.1 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
SRR9971046 MDR-TB lineage4.8 None
SRR10869254 Pre-XDR-TB lineage2.2.1 None
ERR911929 Other lineage4.8 None
ERR3559290 HR-TB lineage4.2.2 None
SRR6046219 Other lineage3;lineage4.8 gb
ERR3559289 HR-TB lineage4.2.2 None
ERR4830549 MDR-TB lineage4.1.1.3 None
ERR978750 RR-TB lineage4.8 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR1173310 Other lineage3.1.1 None
SRR21686597 Sensitive lineage4.1.2.1 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR5818591 Other lineage4.2.2.2 dj
SRR19304035 Other lineage4.1.2.1 None
SRR1792011 Other La1.8.1 None
SRR1735598 RR-TB lineage4.9 None
ERR978760 RR-TB lineage4.8 None
SRR6045763 Pre-XDR-TB lineage2.2.1 None
SAMEA3501052 RR-TB lineage4.8 None
SAMEA3501046 RR-TB lineage4.8 None
SRR18572455 Sensitive lineage4.9 None
SAMEA3501065 RR-TB lineage4.8 None
SRR9971114 Other lineage2.2.1 None
SRR6896535 Other lineage4.1.1.3 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR6046246 Other lineage3 None
SRR6046246 Other lineage3 None
ERR911929_ERR911930 Other lineage4.8 None
ERR4769530 RR-TB lineage4.9 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR7070223 HR-TB lineage3 None
SRR9971088 RR-TB lineage2.2.1 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR5818395 Sensitive lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
ERR978756 Other lineage4.8 None
SRR18911555 Other lineage4.1.2.1 None
SRR6855828 Other lineage4.3.2.1 None
SRR21240055 Other lineage4.1.2.1 None
SRR6397579 Other lineage4.4.1.2 ca
ERR10796583 Other lineage2.2.1 None
ERR2229436 Other lineage4.8 None
ERR3797065 RR-TB lineage4.9 None
ERR978747 Other lineage4.8 None
SRR16156804 Sensitive lineage4.9 None
SRR15316595 RR-TB lineage4.4.2 None
ERR2229811 Other lineage4.8 dk
SRR9971351 RR-TB lineage2.2.1 None
ERR978726 RR-TB lineage4.8 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4769433 RR-TB lineage4.9 None
ERR4812495 Other lineage4.1.2.1 pe
SAMEA3501015 Other lineage4.8 None
ERR4769423 Other La1.3 None
ERR978757 RR-TB lineage4.8 None
ERR9787033 Sensitive lineage6.1.2 None
ERR2027257 Other lineage4.1.2.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR3804166 Other lineage4.3.2 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR6046852 MDR-TB lineage3 None
ERR2446509 Other lineage3 nl
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR5818399 Sensitive lineage4.9 None
SRR7069800 Other lineage3.1.2.1 None
SRR11342686 MDR-TB lineage4.8 None
SRR11342686 MDR-TB lineage4.8 None
SRR10315696 Sensitive lineage4.3.2.1 None
ERR5087596 Other La1.8.1 None
SRR7069441 Sensitive lineage4.8 None
ERR4819706 MDR-TB lineage4.3.4.2 None
SRR6044983 Other lineage3.1.1 None
SRR6044983 Other lineage3.1.1 None
ERR5917985 MDR-TB lineage2.2.1 None
SRR18003031 HR-TB lineage2.2.1 None
ERR2514430 Other lineage3.1.2;lineage4.1.1.3.1 None
SRR9971223 Other lineage2.2.1 None
SRR21240202 HR-TB lineage4.4.1.1 None
ERR911930 Other lineage4.8 None
SRR6511600 MDR-TB lineage4.3.4.2 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR7070329 Other lineage3 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR14801652 HR-TB lineage4.3.3 None