EBG00000313339 - n.2383C>T
Drug resistance types
5 Sensitive
23 RR-TB
3 HR-TB
31 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
69 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.9 | 1 |
| lineage2.2.1 | 31 |
| La1.7 | 1 |
| lineage4.9 | 26 |
| lineage4.8 | 23 |
| La1.7.1 | 2 |
| La1.8.1 | 4 |
| lineage3 | 3 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.1.2.1 | 4 |
| lineage4.1.3 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.2.2 | 1 |
| lineage4.4.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.2.1 | 3 |
| lineage2.2.2 | 6 |
| La1.2 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.3.3 | 5 |
| lineage4.8.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.5 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.2.1.2 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 143 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR3675222 | Other | La1.7 | None | SRR3675389 | Other | lineage4.9 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR21469202 | Other | La1.7.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR19303899 | Other | lineage3 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR400529 | Other | lineage3 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR978756 | Other | lineage4.8 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR978747 | Other | lineage4.8 | None | SRR11342669 | Other | lineage4.8 | None | DRR184629 | Other | lineage2.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR2512835 | Sensitive | lineage4.1.2.1 | gb | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR5818386 | Other | lineage4.9 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR7070293 | Other | lineage4.8 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR867572 | Other | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR8380944 | Sensitive | lineage1.1.2 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4816417 | Other | lineage4.9 | None | ERR1163055 | MDR-TB | lineage4.8 | None | SRR19303907 | Other | lineage4.8 | None | SRR7236399 | Other | La1.8.1 | None | ERR4769418 | Other | La1.2 | None | SRR7236330 | Other | La1.8.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR16156775 | Other | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR867569 | Other | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR18002987 | Other | lineage2.2.1 | None | ERR10796632 | Other | lineage4.3.3 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR3675265 | Other | lineage4 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR4816548 | HR-TB | lineage4.5 | None | SRR3675582 | Other | lineage4.9 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR978751 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR867567 | RR-TB | lineage3 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR5818459 | Other | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | SRR18003045 | Other | lineage2.2.1 | None | ERR867571 | Other | lineage4.9 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818397 | Other | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR1792022 | Other | La1.8.1 | None | SRR5818414 | Other | lineage4.9 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | ERR867575 | Other | lineage4.9 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR4818536 | Other | lineage4.9 | None | ERR978762 | Other | lineage4.8 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR19304104 | Other | lineage4.8 | None | SRR21469200 | Other | La1.7.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046087 | Sensitive | lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR5818464 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR3675509 | Other | lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | DRR185024 | Other | lineage2.2.2 | None | ERR978752 | Other | lineage4.8 | None | ERR10796589 | Other | lineage4.9 | None | SRR18003024 | RR-TB | lineage2.2.1 | None |
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