EBG00000313339 - n.2383C>T
Drug resistance types
12 Sensitive
19 RR-TB
8 HR-TB
26 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
110 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 44 |
| lineage4.3.4.1 | 1 |
| lineage4.8 | 15 |
| lineage4.1.2.1 | 14 |
| lineage4.2.1 | 2 |
| lineage4.3.4.2 | 2 |
| lineage2.2.2 | 5 |
| lineage4 | 5 |
| lineage4.9 | 29 |
| lineage4.3.3 | 4 |
| lineage3 | 10 |
| La1.2 | 1 |
| lineage2.2 | 1 |
| La1.3 | 1 |
| lineage4.3 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.6 | 1 |
| lineage4.3.2 | 2 |
| lineage4.2.2.2 | 2 |
| lineage4.3.1.1 | 1 |
| La1.8.1 | 2 |
| lineage4.8.1 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.2.2 | 1 |
| lineage4.5 | 3 |
| lineage4.4.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage6 | 1 |
| La1.7.1 | 3 |
| 7 | |
| lineage4.9;lineage3.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage1.1.2 | 4 |
| lineage3.1 | 1 |
| lineage4.2.2.1 | 1 |
| lineage1.1.1 | 2 |
| lineage4.1.2 | 2 |
| lineage4.1.1.3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.6.1.2 | 1 |
| lineage4.7 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.6.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 189 |
Geographic prevalence
Country level data for this variant is available for 12 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7131026 | Other | lineage2.2.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131161 | Other | lineage4.8 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | DRR185024 | Other | lineage2.2.2 | None | ERR10796629 | Other | lineage4 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR400529 | Other | lineage3 | None | ERR4769418 | Other | La1.2 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR5866451 | MDR-TB | lineage2.2 | None | ERR4769517 | Other | La1.3 | None | ERR4799835 | Sensitive | lineage3 | in | ERR4769554 | RR-TB | lineage4.9 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR9117679 | Sensitive | lineage2.2.1 | None | ERR9117704 | Other | lineage4.6 | None | ERR6197034 | Other | lineage4.9 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117759 | Other | lineage3 | None | SRR11342688 | Other | lineage4.2.2.2 | None | ERR9117812 | Other | lineage4.3.1.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR19303899 | Other | lineage3 | None | SRR19303805 | Other | lineage4.8 | None | SRR19303819 | Other | lineage4.6.2.2 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303916 | Other | lineage4.1.2.1 | None | SRR19303907 | Other | lineage4.8 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR19304094 | Other | lineage6 | None | SRR19304104 | Other | lineage4.8 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR21469202 | Other | La1.7.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | ERR11081737 | Sensitive | lineage4.8 | None | SRR3675265 | Other | lineage4 | None | ERR4815299 | Other | lineage4.8 | gb | SRR3675501 | HR-TB | None | ERR4815165 | Other | lineage4.1.2.1 | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | SRR3675509 | Other | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR3675533 | Sensitive | lineage3 | None | SRR8380944 | Sensitive | lineage1.1.2 | None | SRR3675547 | Other | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4817047 | Other | lineage4.2.2.1 | gb | ERR4816336 | Sensitive | lineage3 | gb | ERR4817070 | Other | lineage1.1.2 | None | ERR4816417 | Other | lineage4.9 | None | SRR5818386 | Other | None | ERR4816828 | Other | lineage1.1.1 | gb | SRR4034671 | HR-TB | lineage4.1.2 | None | ERR2229760 | Other | lineage4.8 | dk | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816569 | Other | lineage4.3.3 | gb | ERR4816571 | Other | lineage1.1.2 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2512835 | Sensitive | lineage4.1.2.1 | gb | ERR4818432 | HR-TB | lineage4.5 | gb | ERR2513273 | Other | lineage4.1.2.1 | None | ERR4818536 | Other | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819214 | Sensitive | lineage1.1.2 | gb | ERR4819462 | Other | lineage4 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4819622 | Other | lineage4.1.2.1 | None | SRR6045496 | Other | lineage6.1.3 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR4820152 | Sensitive | lineage4.6.1.2 | gb | SRR6046087 | Other | None | SRR6045553 | RR-TB | lineage4.9 | None | SRR6045519 | HR-TB | None | SRR6045664 | Other | lineage4.2.1 | None | ERR4821288 | Other | lineage4.7 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818398 | Other | lineage4.9 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR5818464 | Other | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044787 | Other | lineage4.4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6044993 | Other | lineage3 | None | SRR6045928 | Other | lineage4.9 | None | SRR6044857 | Other | lineage4.8.1 | gb | SRR6044952 | RR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6045986 | Other | lineage3 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR4830353 | Other | None | SRR6046442 | Other | lineage3 | None | SRR6046737 | Other | lineage4.9 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None |
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