EBG00000313339 - n.2446C>G


Drug resistance types
52 Sensitive 18 RR-TB 97 HR-TB 25 MDR-TB 16 Pre-XDR-TB 3 XDR-TB 132 Other
lineage Counts
lineage Count
lineage4.6.2.2 1
lineage3.1;lineage9 1
lineage4.8 19
lineage1.1.2 3
lineage4.9 158
La1.7;lineage4.9;lineage6 1
lineage4.6.1.1 2
lineage4.1.1.3;lineage4.9 2
lineage2.2.1 25
La1.7;M.canetti;lineage4.9 1
lineage2.2.1;lineage4 1
La3;lineage4.9 7
lineage4.3.4.2 1
La1.8.1 6
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.9 1
lineage4.1.1.3 3
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
La2 1
lineage1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4 1
lineage4.9;lineage6.3 1
lineage4.9;lineage7 1
La1.7;lineage4.9 8
lineage4.1.2.1 5
La1.7;lineage4.9;lineage7 3
lineage4.3.4.1 5
lineage3.1.1 1
lineage1.1.2;lineage6.2.3 1
La1;lineage4.1.2 1
M.canetti;lineage4.9 2
lineage2.2.1;lineage4.1.2.1 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.4.1.2 1
lineage4.3.3 2
lineage3 4
La1.2.BCG 3
lineage2.2 1
lineage4.2.1.1;lineage4.3.3 1
lineage3.1.3 1
lineage4.8;lineage4.9 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.7.1 3
lineage4.1.2 1
La3;M.canetti;lineage4.9 1
lineage2.2.1.2 1
lineage4.3.4.2.1 3
La1;lineage2;lineage4.9 1
lineage6.1.3 1
lineage2.1;lineage4.9 1
lineage4.5 1
lineage4.6.3;lineage4.9 1
lineage4.3.2.1 1
La1;lineage4.9 2
lineage4.4.1.1 1
lineage2.2;lineage4 1
La1.7.1;lineage4.9 1
lineage6 1
lineage2.2.1.1 2
La1.7.1;La1.7.X-unk4;lineage7 1
La1.7 1
La3;lineage2.2.1 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage1.1.3.1 1
3
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.3.4 1
lineage2.2;lineage4.9 1
lineage4.1.1.2 1
lineage2.2.1;lineage3 1
La1.7.1;La1.7.X-unk4 1
La1.3 1
lineage4.2.1 1
lineage2.1 2
lineage4.2;lineage4.6.3;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
lineage1.2.2.2 1
La3;lineage2.1;lineage4.9 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage2.2.1;lineage4.9 1
lineage3;lineage4.9 1
La3;lineage4 1
lineage3.1 1
spoligotype Counts
spoligotype Count
None 343
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9786597 Other lineage4.6.2.2 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SAMEA3501065 RR-TB lineage4.8 None
ERR245675 Sensitive lineage1.1.2 None
ERR349300 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR1173568 Sensitive lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
ERR363449 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR779852 HR-TB lineage4.9 None
SRR5341298 Other lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR4769419 Sensitive lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR26399973 Other La3;lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
SRR7617847 Other La1.8.1 None
ERR3797048 Other La3;lineage4.9 None
ERR3283031 Other La3;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
ERR3283030 HR-TB lineage4.9 None
ERR349265 Other lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR970449 RR-TB lineage4.1.1.3 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3797019 Other La1.8.1 None
ERR5917985 MDR-TB lineage2.2.1 None
SRR13888750 Other La2 None
ERR926158 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR400326 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR3273109 HR-TB lineage4 None
ERR363498 Other lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR176779 HR-TB lineage4.9 None
ERR4814976 Other lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR978751 Other lineage4.8 None
SRR5818448 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR12015084 Other lineage4.8 None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR3675541 Sensitive lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
SRR15508556 Other lineage4.3.4.1 None
ERR2851356 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR363453 Other lineage4.9 None
SRR12634609 MDR-TB lineage3.1.1 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
ERR473332 Other lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR11081258 Other lineage4.8 None
SRR1158918 Other lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR1173777 Sensitive lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR1173185 Other lineage4.9 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR212125 HR-TB lineage4.9 None
SAMEA3501070 RR-TB lineage4.8 None
SRR1175491 MDR-TB lineage4.3.4.1 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1196478 Other lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR926155 Other lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR363479 Other lineage4.9 None
SRR1915487 Other La1.2.BCG None
SRR1792011 Other La1.8.1 None
SAMEA3501052 RR-TB lineage4.8 None
ERR137286 Other lineage4.9 None
SRR1792022 Other La1.8.1 None
ERR6358979 HR-TB lineage4.9 None
ERR369162 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR5818414 Other lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR5341373 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR3797087 Sensitive lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR176651 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR4769493 Other lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR978756 Other lineage4.8 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR4798099 HR-TB lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR363421 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
ERR702405 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR6046839 Other lineage4.9 None
ERR978747 Other lineage4.8 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR6982239 Sensitive lineage4.1.1.3 None
ERR4188247 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR926165 Other lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR363474 Sensitive lineage4.9 None
SRR7535082 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR926156 Other lineage4.9 None
ERR4816322 Other lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR736848 Other lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
SRR5341300 HR-TB lineage4.9 None
ERR369163 Other lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR323115 Sensitive lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR9787256 Other lineage6.1.3 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
ERR2503533 Other lineage4.1.2.1 fi
ERR181887 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR373946 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR6981999 Sensitive lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR26159063 RR-TB lineage4.9 None
SRR21469200 Other La1.7.1 None
SRR1175508 Sensitive lineage4.9 None
ERR926160 Other lineage4.9 None
ERR4811031 Other lineage4.5 None
ERR3283011 Other La3;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR1180996 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR8692893 Other lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR1035122 HR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR926163 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6046376 Other lineage3 None
SAMEA3501063 RR-TB lineage4.8 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR4769474 HR-TB lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR4796254 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR8692863 Other lineage2.2;lineage4 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR9787362 Sensitive lineage6 None
SRR10808399 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR6044875 Other lineage4.9 None
ERR363445 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR926164 Other lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
ERR363502 Other lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR5341293 Sensitive lineage4.9 None
SRR6045158 Other lineage4.9 None
ERR978752 Other lineage4.8 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR16156775 Other lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
ERR3797086 Sensitive lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
SRR1184329 Other lineage4.9 None
SRR3675222 Other La1.7 None
SRR3675389 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR5341425 Other lineage4.9 None
SRR1915485 Other La1.2.BCG None
ERR970413 MDR-TB lineage2.2.1 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR736834 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR349266 Other lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR926161 Sensitive lineage4.9 None
ERR369159 Other lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR25827682 Other None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4797474 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR11465351 Sensitive lineage4.1.2.1 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
ERR373945 Other lineage4.9 None
SRR1175472 RR-TB lineage4.3.4.1 None
ERR736817 HR-TB lineage4.3.4 None
ERR400320 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR1159378 Other lineage4.9 None
SRR1791747 Other La1.8.1 None
ERR6866410 HR-TB lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR978757 RR-TB lineage4.8 None
ERR926154 Sensitive lineage4.9 None
ERR926157 Other lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR8975044 Other lineage4.1.1.2 None
ERR978762 Other lineage4.8 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR16156817 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR26159043 Other lineage4.9 None
ERR323066 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR6359066 HR-TB lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR4811030 Other lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
ERR323062 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR751326 Other lineage4.9 None
ERR4769495 Other La1.3 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4831618 MDR-TB lineage2.1 None
ERR3283014 Other La3;lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR4812155 Other lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR26159035 Sensitive lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR502510 HR-TB lineage4.9 None
SRR5341396 Other lineage3;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR21469202 Other La1.7.1 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR970445 MDR-TB lineage2.2.1 None
SRR5341469 HR-TB lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR3283028 Other La3;lineage4 None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR363446 Other lineage4.9 None
ERR1063896 HR-TB None
SRR28351442 HR-TB lineage3.1 None
ERR234659 HR-TB None