EBG00000313325 - n.869A>T
Drug resistance types
51 Sensitive
16 RR-TB
9 HR-TB
50 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2 | 3 |
| lineage3 | 17 |
| lineage2.2.1 | 26 |
| lineage4.4.1.1 | 10 |
| 2 | |
| lineage4.6.1.1 | 4 |
| lineage4.6.1 | 10 |
| lineage1.1.2 | 7 |
| lineage4.1.2.1 | 3 |
| lineage4.3.4.2.1 | 1 |
| lineage4.6.1.2 | 4 |
| lineage4.1.1.3 | 3 |
| lineage4.6.3 | 1 |
| lineage1.2.2.2 | 5 |
| lineage4 | 5 |
| La1.8.1 | 7 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.9 | 24 |
| lineage4.3.4.1 | 3 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.3 | 6 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage3.1.1 | 4 |
| lineage4;lineage3.1 | 1 |
| lineage5.1.1 | 3 |
| lineage4.7 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.9;lineage2.2.1 | 2 |
| lineage2.2.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.8 | 1 |
| lineage4.2.2.1 | 1 |
| La1.7.1 | 3 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 167 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SAMN02599090 | MDR-TB | lineage3 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02381009 | MDR-TB | lineage4.4.1.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR1750895 | Sensitive | lineage2.2.1 | zw | ERR1750920 | Sensitive | lineage4.4.1.1 | za | ERR1750907 | RR-TB | None | SAMN02381005 | Other | lineage4.6.1.1 | None | SAMN02599073 | Sensitive | lineage2.2.1 | None | SAMN02381037 | MDR-TB | lineage4.6.1 | None | SAMN02598990 | Sensitive | lineage1.1.2 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | SAMN02599067 | Sensitive | lineage2.2.1 | None | ERR1034791 | RR-TB | None | SAMN02381051 | RR-TB | lineage4.6.1.2 | None | SAMN02599052 | Sensitive | lineage2.2.1 | None | SRR4033523 | Other | lineage2.2 | None | ERR4816755 | Other | lineage4.1.1.3 | None | SAMN02599089 | MDR-TB | lineage3 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | SAMN02599068 | Sensitive | lineage1.2.2.2 | None | ERR4818575 | Sensitive | lineage4.1.2.1 | gb | SAMN02599071 | Sensitive | lineage3 | None | SAMN02599061 | MDR-TB | lineage3 | None | ERR4820503 | Other | lineage2.2.1 | None | SAMN02599130 | MDR-TB | lineage3 | None | ERR1873445 | MDR-TB | lineage2.2.1 | None | ERR1873557 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819575 | Sensitive | lineage4 | None | SRR5341346 | Sensitive | lineage3 | None | ERR2747656 | Other | La1.8.1 | None | SAMN02381047 | Sensitive | lineage4.6.1 | None | SAMN02381012 | MDR-TB | lineage4.4.1.1 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | ERR4821276 | Other | lineage3 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828749 | Sensitive | lineage2.2.1 | None | ERR502942 | Sensitive | lineage4.9 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | ERR5087846 | Other | La1.8.1 | None | SRR6896576 | Other | lineage2.2.1 | None | ERR10796572 | Other | lineage4.3.4.1 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR038289 | Other | lineage4.3.3 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR5087486 | Other | La1.8.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR036207 | Other | lineage4.9 | None | ERR405209 | Sensitive | lineage4 | None | ERR405217 | Sensitive | lineage2.2.1 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR405216 | Sensitive | lineage3.1.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4627345 | Other | La1.8.1 | None | ERR4811708 | HR-TB | lineage4 | None | ERR5979825 | Sensitive | lineage4.9 | None | ERR5979791 | Sensitive | lineage4.9 | None | ERR751338 | Other | lineage5.1.1 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR6197034 | Other | lineage4.9 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR751336 | Sensitive | lineage5.1.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR1049629 | MDR-TB | lineage4.4.1.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1049622 | MDR-TB | lineage4.4.1.1 | None | SRR1013531 | MDR-TB | lineage4.9 | None | SRR1049630 | MDR-TB | lineage4.4.1.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049623 | MDR-TB | lineage4.4.1.1 | None | SRR1049743 | Sensitive | lineage4.6.1 | None | SRR1049723 | MDR-TB | lineage4.6.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049724 | MDR-TB | lineage4.6.1 | None | SRR1049744 | Sensitive | lineage4.6.1 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1049751 | RR-TB | lineage4.6.1.2 | None | SRR1049752 | RR-TB | lineage4.6.1.2 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR1062941 | MDR-TB | lineage4.6.1.2 | None | SRR1062895 | Other | lineage4.6.1.1 | None | SRR1062933 | Sensitive | lineage4.9 | None | SRR1062897 | MDR-TB | lineage4.4.1.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062927 | MDR-TB | lineage4.6.1 | None | SRR1062937 | HR-TB | lineage4.6.1 | None | SRR11342667 | MDR-TB | lineage4.3.3 | None | SRR10869254 | Pre-XDR-TB | lineage2.2.1 | None | SRR1106670 | Other | lineage4.9 | None | SRR11349133 | MDR-TB | lineage4.3.3 | None | SRR1140586 | HR-TB | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140677 | MDR-TB | lineage4.6.1 | None | SRR1140627 | Other | lineage4.6.1 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1140723 | Sensitive | lineage4.6.1.1 | None | SRR1140729 | MDR-TB | lineage4.4.1.1 | None | SRR1140751 | MDR-TB | lineage4.4.1.1 | None | SRR1169473 | Sensitive | lineage1.1.2 | None | SRR1169591 | Sensitive | lineage1.1.2 | None | SRR1172086 | Sensitive | lineage1.1.2 | None | SRR1169574 | Sensitive | lineage1.1.2 | None | SRR1172293 | Sensitive | lineage1.1.2 | None | SRR1172938 | MDR-TB | lineage3 | None | SRR1172706 | Sensitive | lineage2.2.1 | None | SRR1172915 | Other | lineage1.2.1.2.1 | None | SRR1172710 | Sensitive | lineage1.2.2.2 | None | SRR1172798 | Sensitive | lineage2.2.1 | None | SRR1172832 | Sensitive | lineage2.2.1 | None | SRR1173014 | MDR-TB | lineage3 | None | SRR1173045 | Sensitive | lineage3 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173105 | MDR-TB | lineage3 | None | SRR1173367 | MDR-TB | lineage3 | None | SRR1173445 | Sensitive | lineage3 | None | SRR1173621 | MDR-TB | lineage3 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173686 | MDR-TB | lineage3 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175025 | Sensitive | lineage2.2.1 | None | SRR1175107 | Sensitive | lineage2.2.1 | None | SRR1175131 | Sensitive | lineage2.2.1 | None | SRR1175135 | Sensitive | lineage1.2.2.2 | None | SRR1173727 | MDR-TB | lineage3 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1175096 | Sensitive | lineage1.2.2.2 | None | SRR1175151 | MDR-TB | lineage3 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1180297 | Sensitive | lineage1.2.2.2 | None | SRR1180487 | Sensitive | lineage1.1.2 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1792022 | Other | La1.8.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR16149126 | MDR-TB | lineage4.2.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR15315833 | Sensitive | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | SRR18002950 | MDR-TB | lineage2.2.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR19303931 | Other | lineage2.2.1 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR21469202 | Other | La1.7.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None |
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