EBG00000313339 - n.1065T>C


Drug resistance types
140 Sensitive 24 RR-TB 40 HR-TB 38 MDR-TB 17 Pre-XDR-TB 1 XDR-TB 97 Other
lineage Counts
lineage Count
lineage4.9 150
La2 1
La1.7.1 3
lineage2.2.2 2
lineage4.1.2.1 9
lineage4.1.1.3 7
lineage2.2.1 46
lineage4.6.1.2 5
lineage3 18
lineage4.7 2
lineage4.1.1.3.1 2
lineage4.6.5 1
lineage4.4.1.1 5
lineage4.2.2.2 2
La1.8.1 8
lineage4.2.2 2
lineage4.2.1 5
lineage4.3.4.2 2
lineage4.3.3 4
lineage4.8 10
lineage3.1.2.1 2
lineage3.1.2 1
lineage3.1.1 5
lineage4.3.2.1 5
lineage1.1.2;lineage3 1
lineage2.2.1;lineage4 2
lineage4.4.2 4
lineage2.2.1.1 1
lineage2.2;lineage4.9 1
lineage4.8.1 2
lineage4.3.4.2.1 1
lineage4.4 1
lineage4.1;lineage4.9 2
La1.7.1;La1.7.X-unk4 1
lineage3.1.2.1;lineage4.9 1
lineage4 1
lineage4.5 3
M.canetti;lineage2.1;lineage4.9 1
lineage5.1.2 1
lineage4.1.1.1 2
2
lineage2.2.1;lineage4.9 4
lineage4.3.4 1
lineage4.4.1.1.1 1
lineage3.1.2.2 1
lineage2;lineage4.9 1
lineage4.3.1.1 1
lineage1;lineage4.9 1
lineage1.2.2.2 1
La1.7.1;lineage4.9 1
lineage3.1.1;lineage4.9 1
lineage1.1.2 1
La1.2.BCG 2
lineage4.1.2;lineage4.9 1
lineage4.2.1.1 1
lineage3;lineage4.9 1
lineage1.1.2;lineage6.2.3 1
La1.3 1
lineage4.1.1.3;lineage4.9 2
lineage4.3.4.1 2
lineage4.1.2 3
lineage3.1.1;lineage4 1
lineage4.2.1.1;lineage4.3.3 1
lineage1.2.1.1 1
lineage1.1.2;lineage2.2.1 1
lineage6.1.3 1
spoligotype Counts
spoligotype Count
None 357
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1181283 Sensitive lineage4.9 None
SRR13888750 Other La2 None
ERR926158 Sensitive lineage4.9 None
ERR4821811 Sensitive lineage4.9 None
SRR16156188 Sensitive lineage4.9 None
SRR21469201 Other La1.7.1 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR3675209 Sensitive lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
ERR349299 Other lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR12708392 Other lineage2.2.1 None
SRR3675318 Other lineage4.9 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR7070329 Other lineage3 None
SRR18002985 HR-TB lineage2.2.1 None
ERR1063862 HR-TB lineage4.9 None
SRR6046802 Other lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR6046359 Other lineage4.7 None
ERR363499 Sensitive lineage4.9 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR349298 Sensitive lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
SRR6046848 Other lineage4.6.5 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR2027230 Other lineage4.2.2.2 None
ERR3468488 Other La1.8.1 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
SRR7236330 Other La1.8.1 None
ERR3797047 MDR-TB lineage4.9 None
ERR2886463 Sensitive lineage2.2.1 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR363447 Other lineage4.9 None
ERR9786810 Sensitive lineage4.1.2.1 None
DRR188816 Sensitive lineage4.2.2 None
ERR970413 MDR-TB lineage2.2.1 None
SRR1180413 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR7069027 MDR-TB lineage4.3.4.2 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR349296 Sensitive lineage4.9 None
SRR11342655 MDR-TB lineage2.2.1 None
SRR12708419 Other lineage4.3.3 None
SRR9971122 MDR-TB lineage4.8 None
ERR4769442 Sensitive lineage4.9 None
SRR6046729 Other lineage3 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR9786076 Sensitive lineage3 None
SRR1180355 Sensitive lineage4.9 None
SRR19325518 MDR-TB lineage2.2.1 None
ERR736875 HR-TB lineage4.9 None
SRR7069097 Other lineage3.1.2.1 None
ERR11465830 Sensitive lineage4.9 None
SRR6046273 Other lineage3.1.2 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18213736 Other lineage3 None
ERR3275190 Other lineage3 nl
ERR926155 Sensitive lineage4.9 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR176651 Other lineage4.9 None
ERR2446580 Sensitive lineage3.1.1 nl
ERR4769444 HR-TB lineage4.9 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR1180406 Sensitive lineage4.9 None
SRR6964556 RR-TB lineage1.1.2;lineage3 None
SRR6046611 Sensitive lineage4.9 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003009 MDR-TB lineage2.2.1 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
ERR4819357 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR10315556 Sensitive lineage2.2.1 None
SRR1180345 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR4769554 RR-TB lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
SRR15316595 RR-TB lineage4.4.2 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR6982239 Sensitive lineage4.1.1.3 None
ERR4188247 HR-TB lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
SRR6045664 Other lineage4.2.1 None
SRR18909918 Other lineage2.2.1.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR4799547 HR-TB lineage2.2.1 None
SRR1184021 Sensitive lineage4.9 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
ERR349300 Sensitive lineage4.9 None
ERR363421 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
SRR16156775 Other lineage4.9 None
ERR867567 RR-TB lineage3 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR349265 Other lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
ERR373945 Sensitive lineage4.9 None
ERR363437 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR11342686 MDR-TB lineage4.8 None
SRR1173515 Sensitive lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
SRR11662694 Other lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR1175508 Sensitive lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6044841 Other lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR400336 Sensitive lineage4.9 None
ERR926163 Other lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR1181349 Sensitive lineage4 None
ERR3276170 Other lineage4.1.2.1 nl
SRR7069319 Other lineage4.5 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18213726 Other lineage3 None
SRR3675541 Sensitive lineage4.9 None
ERR5311077 Other La1.8.1 None
ERR971389 Sensitive lineage4.9 None
SRR6044904 Other lineage3 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR6045706 Sensitive lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR400538 RR-TB lineage5.1.2 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR12708416 Sensitive None
SRR21469202 Other La1.7.1 None
SRR1792011 Other La1.8.1 None
ERR6359070 Sensitive lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR21686597 Sensitive lineage4.1.2.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR5979407 Other lineage3 None
SRR18003024 RR-TB lineage2.2.1 None
ERR176778 HR-TB lineage4.9 None
SRR12634609 MDR-TB lineage3.1.1 None
ERR4811101 Other lineage4.4.2 None
SRR7070195 Sensitive lineage3.1.2.1 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR970445 MDR-TB lineage2.2.1 None
SRR6045503 Sensitive lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR363500 Sensitive lineage4.9 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1175506 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
ERR369162 Other lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
ERR3797029 Other lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
SRR7070223 HR-TB lineage3 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
ERR736817 HR-TB lineage4.3.4 None
ERR3275321 Sensitive lineage3.1.1 nl
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1172807 Sensitive lineage4.9 None
SRR1175496 Sensitive lineage4.9 None
SRR1792025 Other La1.8.1 None
ERR369163 Sensitive lineage4.9 None
SRR6046815 Other lineage3 None
ERR369158 Other lineage4.9 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR369151 Other lineage4.9 None
SRR19303820 RR-TB lineage4.8 None
SRR6046440 Other lineage3.1.2.2 None
ERR363498 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR22424765 HR-TB lineage4.8 None
SRR18913750 Other lineage2.2.1 None
SRR1172717 Sensitive lineage4.9 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR363490 Sensitive lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
SRR7070469 Other lineage4.3.1.1 None
SRR6045267 RR-TB lineage4.8 None
SRR3675514 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR400345 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR7070293 Other lineage4.8 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR6359069 Sensitive lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR1063846 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR6046246 Other lineage3 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR18002945 Other lineage2.2.1 None
SRR18003007 MDR-TB lineage4.5 None
ERR10796595 Other lineage4.9 None
ERR9896153 RR-TB lineage4.4.1.1 None
ERR4812763 Other lineage2.2.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR20969542 Other lineage4.4.2 None
ERR363509 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR7069137 Other lineage4.8 None
ERR3439489 RR-TB La1.8.1 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR1196545 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR9117788 Other lineage3 None
SRR6046668 Sensitive lineage1.1.2 gb
ERR4812155 Other lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR926164 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR363502 Other lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR1175512 Sensitive lineage4.9 None
SRR14801652 HR-TB lineage4.3.3 None
SRR1180399 Sensitive lineage4.9 None
ERR373947 Other lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
SRR1915485 Other La1.2.BCG None
ERR349266 Sensitive lineage4.9 None
SRR1792022 Other La1.8.1 None
ERR369157 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR3675472 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR6982246 Sensitive lineage4.1.2;lineage4.9 None
SRR18002908 Other lineage2.2.1 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR6785281 Other lineage4.2.1.1 None
SRR5341396 Other lineage3;lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
ERR4769514 Other La1.3 None
SRR1181402 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
ERR369159 Sensitive lineage4.9 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR11342646 HR-TB lineage3 None
ERR181824 HR-TB lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR867521 MDR-TB lineage2.2.1 None
SRR13423546 Other lineage4.4.2 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR10796555 Other lineage4.1.2.1 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR10796599 Other lineage4.8 None
SRR15508556 Other lineage4.3.4.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR7069671 HR-TB lineage3 None
SRR10315693 RR-TB lineage4.1.2 None
SRR1175513 Sensitive lineage4.9 None
ERR4796577 HR-TB None
SRR1049674 HR-TB lineage2.2.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
ERR926157 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR7645928 Other lineage4.7 None
SRR11972300 MDR-TB lineage2.2.1 None
ERR363453 Sensitive lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR11465829 Sensitive lineage4.9 None
SRR6046275 Other lineage3.1.1;lineage4 None
SRR12708414 HR-TB lineage2.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR10315464 MDR-TB lineage4.4.1.1 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR7069922 Other lineage2.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR11342658 RR-TB lineage4.1.2 None
ERR9117763 HR-TB lineage3 None
SRR10315558 Sensitive lineage2.2.1 None
SRR1180300 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR21469200 Other La1.7.1 None
ERR473323 HR-TB lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR3675580 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR7617847 Other La1.8.1 None
SRR7645899 Other lineage2.2.1 None
SRR6964558 MDR-TB lineage1.1.2;lineage2.2.1 None
ERR3806588 Other lineage6.1.3 None
SRR7069255 Other lineage4.1.2 None
SRR3675210 Sensitive lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
DRR184982 Other lineage2.2.1 None
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR736848 Other lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR10796618 Other lineage4.3.4.1 None
ERR2446509 Other lineage3 nl
ERR4596904 MDR-TB lineage3.1.1 None
SRR5341345 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR9786276 Sensitive lineage4.8 None
ERR4816964 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
SRR10315696 Sensitive lineage4.3.2.1 None
SRR10315751 MDR-TB lineage4.8 None
ERR363426 Sensitive lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1180420 Sensitive lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None