EBG00000313339 - n.1065T>C
Drug resistance types
140 Sensitive
24 RR-TB
40 HR-TB
37 MDR-TB
17 Pre-XDR-TB
1 XDR-TB
97 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 9 |
| lineage4.9 | 150 |
| lineage4.1.1.3 | 7 |
| lineage3 | 18 |
| lineage4.4.1.1 | 5 |
| lineage2.2.1 | 46 |
| La1.7.1;lineage4.9 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage4.5 | 3 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.8.1 | 8 |
| lineage4.2.2.2 | 2 |
| lineage4.3.3 | 4 |
| lineage5.1.2 | 1 |
| La1.2.BCG | 2 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.2.1 | 5 |
| lineage3;lineage4.9 | 1 |
| La1.3 | 1 |
| lineage4.6.1.2 | 5 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage2.2.1;lineage4.9 | 4 |
| lineage4.1.2 | 3 |
| lineage3.1.2 | 1 |
| lineage3.1.1 | 5 |
| lineage3.1.1;lineage4 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.3.4 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.8 | 10 |
| lineage3.1.2.2 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 2 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 2 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.4.2 | 4 |
| lineage1.1.2 | 1 |
| lineage4.6.5 | 1 |
| lineage4.2.2 | 2 |
| lineage4.1.1.1 | 2 |
| lineage4.3.4.2 | 2 |
| lineage1.1.2;lineage3 | 1 |
| lineage4.3.4.1 | 2 |
| lineage3.1.2.1 | 2 |
| 2 | |
| lineage4.3.2.1 | 5 |
| lineage1.2.1.1 | 1 |
| lineage2.2.2 | 2 |
| lineage4.8.1 | 2 |
| lineage1;lineage4.9 | 1 |
| La2 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.7 | 2 |
| lineage4.1.1.3.1 | 2 |
| lineage4.2.1.1 | 1 |
| La1.7.1 | 3 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage6.1.3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 356 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6865513 | Other | lineage4.1.2.1 | None | ERR349299 | Other | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR7070329 | Other | lineage3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR6046802 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR7069319 | Other | lineage4.5 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311077 | Other | La1.8.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR2027230 | Other | lineage4.2.2.2 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR1180399 | Sensitive | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | ERR9786810 | Sensitive | lineage4.1.2.1 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR400538 | RR-TB | lineage5.1.2 | None | SRR1915485 | Other | La1.2.BCG | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR4769514 | Other | La1.3 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR11342646 | HR-TB | lineage3 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR867521 | MDR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1180250 | Other | lineage4.9 | None | ERR2446580 | Sensitive | lineage3.1.1 | nl | SRR6046611 | Sensitive | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR3275321 | Sensitive | lineage3.1.1 | nl | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1792025 | Other | La1.8.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR7069255 | Other | lineage4.1.2 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR363437 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR4821811 | Sensitive | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR1175508 | Sensitive | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR18002945 | Other | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR10796595 | Other | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | SRR7069137 | Other | lineage4.8 | None | ERR3439489 | RR-TB | La1.8.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR9117788 | Other | lineage3 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR1180977 | Sensitive | lineage4.9 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR18213726 | Other | lineage3 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR363445 | Other | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR7236330 | Other | La1.8.1 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1792022 | Other | La1.8.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR1915487 | Other | La1.2.BCG | None | ERR349296 | Sensitive | lineage4.9 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR6964556 | RR-TB | lineage1.1.2;lineage3 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | ERR369159 | Sensitive | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR10796599 | Other | lineage4.8 | None | SRR15508556 | Other | lineage4.3.4.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR7069097 | Other | lineage3.1.2.1 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR11465830 | Sensitive | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18213736 | Other | lineage3 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4796577 | HR-TB | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR3797029 | Other | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR7070223 | HR-TB | lineage3 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR7645899 | Other | lineage2.2.1 | None | DRR184982 | Other | lineage2.2.1 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1173515 | Sensitive | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6046246 | Other | lineage3 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR4812763 | Other | lineage2.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | SRR1196545 | Sensitive | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4812155 | Other | lineage4.9 | None | ERR3468488 | Other | La1.8.1 | None | ERR363502 | Other | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR373947 | Other | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708416 | Sensitive | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR1792011 | Other | La1.8.1 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR1181368 | Other | lineage4.9 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR5979407 | Other | lineage3 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR6046729 | Other | lineage3 | None | ERR9786076 | Sensitive | lineage3 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | ERR4811101 | Other | lineage4.4.2 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR7069671 | HR-TB | lineage3 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | SRR1181325 | Sensitive | lineage4.9 | None | SRR7645928 | Other | lineage4.7 | None | SRR11972300 | MDR-TB | lineage2.2.1 | None | ERR176651 | Other | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR11465829 | Sensitive | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR9117763 | HR-TB | lineage3 | None | ERR369163 | Sensitive | lineage4.9 | None | SRR6046815 | Other | lineage3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR369151 | Other | lineage4.9 | None | SRR21469200 | Other | La1.7.1 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR18913750 | Other | lineage2.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR7617847 | Other | La1.8.1 | None | ERR3806588 | Other | lineage6.1.3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR7070469 | Other | lineage4.3.1.1 | None | ERR736848 | Other | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR10796618 | Other | lineage4.3.4.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR349265 | Other | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR400345 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR7070293 | Other | lineage4.8 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR21469201 | Other | La1.7.1 | None |
|---|
