EBG00000313339 - n.1175A>T
Drug resistance types
86 Sensitive
70 RR-TB
41 HR-TB
71 MDR-TB
39 Pre-XDR-TB
2 XDR-TB
448 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 17 |
| lineage4.8 | 65 |
| lineage3 | 80 |
| lineage4.1.2.1 | 75 |
| lineage4 | 21 |
| lineage4.1.2 | 9 |
| 15 | |
| lineage3.1.1 | 16 |
| lineage2.2 | 3 |
| lineage4.7 | 10 |
| lineage4.5 | 9 |
| lineage4.6.2.2 | 18 |
| lineage4.8.2 | 3 |
| lineage2.2.1 | 94 |
| lineage4.3.3 | 30 |
| lineage4.2.1 | 5 |
| lineage1.1.3.3 | 3 |
| lineage4.2.1.1 | 3 |
| lineage1 | 1 |
| lineage4.8.1 | 4 |
| lineage3.1.3 | 5 |
| lineage3.1.2.1 | 4 |
| lineage4.1.1 | 13 |
| lineage4.1.1.3.1 | 6 |
| lineage3.1.2 | 6 |
| lineage4.6 | 6 |
| lineage4.3.2 | 6 |
| lineage1.1.3.1 | 6 |
| lineage4.1.1.3 | 17 |
| lineage4.3.4.2 | 3 |
| lineage4;lineage3 | 1 |
| lineage4.9 | 48 |
| lineage1.2.1.2.1 | 7 |
| lineage4.4.1.1 | 20 |
| lineage1.2.2.2 | 8 |
| lineage4.3.4.1 | 9 |
| lineage3.1.2.2 | 5 |
| lineage4;lineage3.1.2.1 | 1 |
| lineage4.1.4 | 2 |
| lineage1.2.1.1 | 3 |
| lineage4.3.4.2.1 | 3 |
| La3 | 1 |
| lineage4.2.2.2 | 11 |
| lineage4.3.1.1 | 6 |
| lineage6.1.3 | 1 |
| lineage4.6.4 | 1 |
| lineage4.1.3 | 2 |
| lineage1.1.3.2 | 1 |
| lineage5 | 2 |
| lineage2.1 | 1 |
| lineage3.1 | 3 |
| lineage4.1.1.2 | 2 |
| lineage4.8;lineage3 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.6.5 | 2 |
| La1.8.1 | 6 |
| lineage2.2.1.1 | 4 |
| lineage4.3.2.1 | 3 |
| lineage4.4.2 | 3 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.2.2 | 2 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.3 | 2 |
| lineage4.3.4 | 1 |
| lineage6 | 3 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.3 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage2.2.2 | 7 |
| lineage5.1.1 | 1 |
| lineage4.1.4;lineage2.2.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.2.2.1 | 3 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| La1.7.1 | 3 |
| lineage1.2.2 | 1 |
| lineage4.1 | 4 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.9.1 | 1 |
| La1.2.BCG | 1 |
| lineage4.6.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 757 |
Geographic prevalence
Country level data for this variant is available for 146 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4817070 | Other | lineage1.1.2 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816464 | Other | lineage3 | None | ERR4816510 | Other | lineage4.1.2.1 | None | ERR2229197 | Sensitive | lineage4 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816536 | Other | lineage4.1.2.1 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4817175 | Other | lineage4.8 | None | ERR4816627 | Other | lineage2.2 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816696 | Other | lineage3 | None | ERR4816677 | Other | lineage4.5 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816703 | Sensitive | lineage4.5 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR4816818 | Other | lineage4.8.2 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817439 | Other | lineage4.6.2.2 | gb | ERR4818655 | Other | lineage4.3.3 | None | ERR4817276 | Other | lineage2.2.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816931 | Sensitive | lineage4.8 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4817290 | Other | lineage3 | gb | ERR4817452 | Other | lineage4.8 | None | ERR4815804 | Other | lineage4.2.1 | gb | ERR4817665 | Other | lineage4.8 | None | ERR4817751 | Other | lineage1.1.3.3 | None | ERR4817730 | Other | lineage4.2.1.1 | gb | ERR4817710 | Other | lineage1.1.2 | None | ERR4818671 | Other | lineage4.8 | gb | ERR4817800 | Other | lineage3 | gb | ERR4818988 | Other | lineage1 | None | ERR4818691 | Other | lineage4.8 | None | ERR4817874 | Other | lineage3 | None | ERR4817853 | Other | lineage4.8.1 | None | ERR4818698 | HR-TB | lineage2.2.1 | gb | ERR4818753 | Other | lineage3 | gb | ERR2513589 | Other | lineage3.1.3 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR4817895 | Other | lineage4.1.2.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR2513056 | HR-TB | lineage4.1.2.1 | gb | ERR4818726 | Other | lineage4.1.2.1 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4818752 | Other | lineage3 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818008 | Other | lineage4.3.3 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR2512443 | Other | lineage4.8 | gb | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818104 | Other | lineage4.1.2 | gb | ERR2512471 | Sensitive | lineage4.1.1 | gb | ERR2513160 | Pre-XDR-TB | lineage3 | gb | ERR4819087 | Other | lineage4.3.3 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818810 | Other | lineage2.2.1 | None | ERR4818176 | Other | lineage4.1.2.1 | None | ERR2513547 | Other | lineage3.1.2.1 | gb | ERR2512536 | Other | lineage3.1.3 | None | ERR4818208 | Other | lineage4.1.1.3.1 | gb | ERR4818190 | Other | lineage4.8 | None | ERR2513462 | Sensitive | lineage3.1.3 | gb | ERR4818200 | Other | lineage3.1.2 | gb | ERR4818212 | Sensitive | lineage4.6 | gb | ERR4818232 | Other | lineage4.1.2 | gb | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR4818888 | Sensitive | lineage4.1.2.1 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR2512606 | MDR-TB | lineage3 | None | ERR2512698 | Other | lineage1.1.3.1 | gb | ERR2512630 | Other | lineage4.8 | gb | ERR4818393 | RR-TB | lineage3 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818426 | Sensitive | lineage4.1.1.3 | None | ERR4818432 | HR-TB | lineage4.5 | gb | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR4818556 | Other | lineage3 | None | ERR4818948 | Sensitive | lineage4.3.3 | gb | ERR2512841 | HR-TB | lineage2.2.1 | gb | ERR4818570 | Other | lineage4.3.3 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR2513298 | Other | lineage4.8 | gb | ERR2512884 | Other | lineage4.6.2.2 | gb | SRR5007178 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR2512872 | Sensitive | lineage4.2.1.1 | None | SRR5007186 | Other | lineage4.6 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007181 | Sensitive | lineage2.2.1 | gb | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4818964 | Other | lineage1.2.1.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR2512941 | Other | lineage1.1.2 | None | ERR4817640 | Sensitive | lineage4.1.1.3 | gb | ERR2513619 | Other | lineage4.8 | gb | ERR2513657 | Other | lineage1.2.2.2 | gb | ERR2513628 | Other | lineage4.1.2.1 | None | ERR2513681 | Other | lineage1.1.2 | None | ERR4819131 | Other | lineage4 | None | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR4819196 | Other | lineage4.1.1 | gb | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4819192 | Other | lineage3 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4819166 | Other | lineage3 | gb | ERR2513743 | Other | lineage4.1.2 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR2513994 | MDR-TB | lineage2.2.1 | gb | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4820270 | MDR-TB | lineage4.8 | gb | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819284 | Other | lineage4.3.4.1 | None | ERR4819313 | Other | lineage3.1.1 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR4819307 | RR-TB | lineage4 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR2514037 | Sensitive | lineage3 | gb | ERR4819377 | Other | lineage4;lineage3.1.2.1 | None | ERR4819385 | Other | lineage2.2.1 | gb | ERR3275239 | Sensitive | lineage4.8 | nl | ERR4820324 | Other | lineage4 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4819414 | Other | lineage1.1.3.1 | gb | ERR4820746 | RR-TB | lineage3 | None | ERR2514261 | Other | lineage3 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819532 | HR-TB | lineage4.6.2.2 | gb | ERR2514279 | Other | lineage3 | gb | ERR4819550 | Other | lineage3 | None | ERR2514298 | Other | lineage1.2.1.2.1 | gb | ERR4819553 | Other | lineage4.1.4 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4819555 | Other | lineage4.8 | None | ERR4819593 | Other | lineage4.5 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4819630 | Other | lineage4.8 | gb | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4820769 | Other | lineage4.8 | None | ERR2514410 | Sensitive | lineage4.5 | gb | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4819699 | HR-TB | lineage4.6.2.2 | gb | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819716 | Sensitive | lineage4.1.2.1 | gb | ERR2514645 | Other | lineage4.3.4.1 | None | ERR2514521 | Sensitive | lineage4.8 | gb | ERR2514565 | Other | lineage3.1.2.1 | gb | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4820891 | Other | lineage4.9 | gb | ERR2514533 | Other | lineage4.9 | None | ERR4819766 | Other | lineage4.4.1.1 | None | ERR2514673 | Other | lineage4.1.2.1 | gb | ERR2514668 | Other | lineage4.8.1 | gb | ERR4819787 | Other | lineage4.1.2.1 | None | ERR2514692 | Other | None | ERR2513819 | Pre-XDR-TB | lineage4.3.3 | gb | ERR4819821 | Other | lineage4.8 | None | ERR4819834 | Other | lineage4.8 | gb | ERR2514834 | Other | lineage4.7 | None | ERR4819872 | HR-TB | lineage4.4.1.1 | None | ERR1023509 | Other | None | ERR4820820 | Other | lineage1.2.1.1 | gb | ERR2514968 | Other | lineage4.3.3 | None | ERR4820572 | Other | lineage1.2.1.2.1 | None | ERR4819982 | RR-TB | lineage2.2.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR2514949 | Sensitive | lineage3 | gb | ERR4820005 | Sensitive | lineage3 | None | ERR4820001 | Other | lineage4.8 | gb | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR2515032 | Other | lineage3 | None | ERR2515077 | Sensitive | lineage3 | gb | ERR4820833 | HR-TB | None | SRR6045424 | Other | lineage1.1.2 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820107 | RR-TB | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820194 | Other | La3 | None | ERR4820846 | RR-TB | lineage4.6.2.2 | gb | ERR4820130 | Other | lineage3 | None | ERR4820188 | Other | lineage3 | gb | ERR4820953 | Other | lineage4.3.3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821776 | Sensitive | lineage4.2.2.2 | None | ERR4820941 | HR-TB | lineage3 | gb | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4821791 | HR-TB | lineage4.1.2.1 | None | ERR4821829 | Other | lineage1.1.2 | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | ERR4821028 | Sensitive | lineage3.1.1 | None | SRR6045447 | Other | lineage3 | gb | ERR4821812 | Other | lineage4.8 | gb | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6045445 | Other | lineage4.3.1.1 | None | ERR4821105 | Other | lineage3.1.2 | gb | ERR4821143 | RR-TB | lineage4.9 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6045485 | Other | lineage4.9 | None | ERR4821127 | HR-TB | lineage4.6.2.2 | gb | SRR6045516 | Other | lineage3.1.1 | None | ERR4821137 | Sensitive | lineage4.3.4.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821167 | Other | lineage4.8 | gb | ERR4821154 | Other | lineage2.2.1 | gb | ERR4821891 | Other | lineage4.8 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821171 | Sensitive | lineage4.3.1.1 | gb | ERR4821276 | Other | lineage3 | None | ERR4821214 | RR-TB | None | ERR4821249 | Other | lineage4.6.4 | gb | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821263 | Other | lineage4.1.3 | gb | ERR4821200 | Other | lineage4.1.1 | gb | ERR4821917 | Sensitive | lineage1.1.3.2 | gb | ERR4821288 | Other | lineage4.7 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4821310 | Other | lineage5 | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821360 | Other | lineage4.1.2.1 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR4821325 | Other | lineage3 | None | ERR4821371 | Other | lineage4.8 | gb | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4822057 | Sensitive | lineage4.1.1 | None | ERR4821409 | Other | lineage4.8 | None | ERR4821438 | Other | lineage3 | None | ERR4822085 | Other | lineage4.8 | gb | ERR4822093 | Sensitive | lineage4.1.1 | None | ERR4821526 | Other | lineage4.3.2 | None | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4821477 | Other | lineage4.8 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821572 | Other | lineage2.1 | None | ERR4821563 | HR-TB | lineage1.1.2 | gb | ERR4822170 | Other | lineage4.1.1.3 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6045565 | Other | lineage4.6.2.2 | None | ERR4821761 | Other | lineage3 | gb | ERR4822225 | Sensitive | lineage3 | gb | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821712 | HR-TB | None | ERR4821718 | Other | lineage4.2.2.2 | gb | SRR6045614 | Other | lineage4.8 | None | SRR6045599 | Other | lineage4.8 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6046113 | Other | lineage4.1.1.3 | None | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045655 | Other | lineage4.1.1.3.1 | None | SRR6046135 | Other | lineage4.1.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045705 | Other | lineage4.9 | None | SRR6045743 | Other | lineage3 | None | SRR5818572 | Sensitive | lineage4.2.2.2 | None | SRR6045763 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045778 | Other | lineage3.1 | None | SRR6045768 | Other | lineage4.1.2.1 | gb | SRR5818610 | Other | lineage3 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR5818622 | Sensitive | lineage4.2.2.2 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818667 | Sensitive | lineage4.4.1.1 | dj | SRR5818663 | Sensitive | lineage4.1.2.1 | dj | SRR5818669 | Sensitive | lineage1.2.2.2 | None | SRR5818686 | Sensitive | lineage4.2.2.2 | dj | SRR5818672 | Other | lineage1.2.2.2 | None | SRR6045859 | Other | lineage3 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6045876 | Other | lineage3 | gb | SRR6044817 | Other | lineage3 | None | SRR6045899 | Other | lineage4.1.2.1 | gb | SRR6044841 | Other | lineage4.9 | None | SRR6045928 | Other | lineage4.9 | None | SRR6045910 | Other | lineage3.1 | None | SRR6044872 | Sensitive | lineage3.1.2.1 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6044904 | Other | lineage3 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044936 | Other | lineage4 | None | SRR6044993 | Other | lineage3 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6045052 | HR-TB | lineage4.2.1.1 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6045024 | Other | lineage4.1.1.2 | None | SRR6045056 | Other | lineage2.2.1 | gb | SRR6045162 | Sensitive | lineage4.9 | None | SRR6046159 | Other | lineage4.8.2 | None | SRR6046173 | Other | lineage3 | None | SRR6045119 | Other | lineage3 | gb | SRR6045125 | Other | lineage1.1.2 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6045248 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | SRR6045178 | Other | lineage3 | None | SRR6046208 | Other | lineage4 | None | SRR6045222 | Other | lineage4.1.2.1 | None | SRR6046050 | Other | lineage4.3.3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045295 | Other | lineage4.7 | None | SRR6045288 | Other | lineage3 | gb | SRR6045289 | Other | None | SRR6046064 | Other | lineage3 | gb | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045327 | HR-TB | None | SRR6046219 | Other | lineage4.8;lineage3 | gb | ERR4830887 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046291 | Other | lineage3 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR2851359 | Other | lineage4.9 | None | ERR4829015 | Sensitive | lineage4.6.2.2 | it | ERR4829767 | HR-TB | lineage4.8 | None | SRR6046246 | Other | lineage3 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046376 | Other | lineage3 | None | ERR4829337 | Other | lineage4.8 | None | ERR4830888 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046508 | Sensitive | lineage3.1.2.2 | gb | ERR4830892 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046463 | Other | lineage4.4.1.1 | None | ERR4829835 | HR-TB | lineage4.8 | it | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046447 | Sensitive | lineage4.8 | gb | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046541 | Other | lineage4.9 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046607 | Other | lineage3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6046646 | Other | lineage4.7 | gb | SRR6046679 | Other | lineage3 | gb | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046729 | Other | None | SRR6046839 | Other | lineage4.9 | None | SRR6046743 | Other | lineage3 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046818 | Other | lineage4.2.1 | gb | SRR6046815 | Other | lineage3 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6397642 | RR-TB | None | SRR6046860 | Other | lineage4.4.1.1 | None | SRR6046874 | Other | lineage4.5 | None | SRR6367397 | Other | lineage4.1.2.1 | None | ERR3276155 | Other | lineage4.1.2.1 | nl | SRR6153150 | Other | lineage3.1.1 | None | SRR6153166 | Other | lineage1.2.1.2.1 | ca | SRR6398019 | Sensitive | lineage4.1.2 | ca | SRR6398013 | Other | lineage4.1.2 | ca | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | ERR5087846 | Other | La1.8.1 | None | ERR5087486 | Other | La1.8.1 | None | SRR7131098 | MDR-TB | lineage4.3.3 | None | SRR7131030 | Other | lineage4.1.2.1 | None | SRR7131075 | Other | lineage4.8 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR7131151 | Other | lineage4 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131233 | MDR-TB | lineage4.3.3 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7131183 | MDR-TB | lineage2.2.1 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR9971334 | MDR-TB | lineage4.3.2.1 | None | SRR9971035 | RR-TB | lineage2.2.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR9971144 | RR-TB | lineage2.2.1 | None | SRR8651617 | Pre-XDR-TB | lineage4.5 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | SRR9217359 | MDR-TB | lineage1.1.2 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796557 | Other | lineage4 | None | SRR9971223 | Other | lineage2.2.1 | None | ERR10762318 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796581 | HR-TB | lineage4.1.2 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796586 | Other | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796599 | Other | lineage4 | None | ERR10796615 | Other | lineage4 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796627 | Other | lineage4 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796634 | Other | lineage4 | None | ERR10796635 | Other | lineage4 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3806588 | Other | lineage6 | None | ERR4586795 | Other | La1.8.1 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | ERR4769423 | Other | La1.3 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR6197034 | Other | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6197022 | Other | lineage4.9 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR4811708 | HR-TB | lineage4 | None | ERR5908124 | Other | lineage4.8 | None | ERR751345 | Other | lineage5.1.1 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9117695 | Other | lineage4.1.2.1 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR9117676 | Other | lineage4.2.2.2 | None | ERR9117708 | Sensitive | lineage3 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117711 | Other | lineage4.3.4.2.1 | None | ERR9117725 | Other | lineage4.1.1 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117763 | HR-TB | lineage3 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9117781 | Other | lineage3.1.3 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9117788 | Other | lineage3 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117806 | Other | lineage4.8 | None | ERR9119120 | Other | lineage4.8 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR9786828 | MDR-TB | lineage4.1.4;lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786613 | Sensitive | lineage4.1.2.1 | None | ERR9786810 | Sensitive | lineage4.1.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR9787033 | Sensitive | lineage6 | None | ERR9811805 | MDR-TB | lineage4.8 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315471 | Pre-XDR-TB | lineage4.8.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR10315648 | MDR-TB | lineage4.9 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR11349159 | MDR-TB | lineage2.2.2 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR11349184 | MDR-TB | lineage2.2.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349208 | MDR-TB | lineage2.2.1 | None | SRR11567803 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172213 | Sensitive | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1173311 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173740 | Other | None | SRR11972427 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181250 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1180252 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR16149133 | MDR-TB | lineage4.2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR14807552 | Sensitive | lineage4.8 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR16149136 | MDR-TB | lineage4.2.2.1 | None | SRR15276982 | Pre-XDR-TB | lineage3 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR16103908 | Sensitive | lineage1.2.1.2.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR1792025 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR18002926 | Other | lineage2.2.1 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002899 | RR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002929 | HR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18213680 | Sensitive | lineage3 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18213726 | Other | lineage3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19158679 | Sensitive | lineage4.4.1.1 | None | SRR18911555 | Other | lineage4.1.2.1 | None | SRR18913750 | Other | lineage2.2.1 | None | SRR19303805 | Other | lineage4.8 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19303815 | Other | lineage4.8 | None | SRR19303810 | Sensitive | lineage4.8 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303876 | Other | lineage4.7 | None | SRR19303985 | Other | lineage4.8 | None | SRR19303907 | Other | lineage4.8 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR19304094 | Other | lineage6 | None | SRR19304109 | Other | lineage4.8 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR21595825 | Other | lineage1.2.1.2.1 | None | SRR22048374 | Sensitive | lineage4.8 | None | SRR21662013 | Other | lineage2.2.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR22048373 | Sensitive | lineage4.1.2.1 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR21727735 | MDR-TB | lineage2.2.1 | None | ERR4815154 | Sensitive | lineage4.1.2.1 | None | SRR22048379 | Other | lineage4.4.1.1 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR22424743 | Pre-XDR-TB | lineage1.1.2 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | ERR4815104 | Other | lineage4.8 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR4815268 | Other | lineage4.8 | None | ERR4815178 | Other | lineage4.8 | gb | SRR3675475 | Other | lineage4.1.1.3 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815165 | Other | lineage4.1.2.1 | None | SRR3675474 | Other | lineage4.1.1 | None | ERR4815613 | Other | lineage3 | None | ERR4815615 | Other | lineage3 | gb | ERR4815777 | Other | lineage4.9 | None | ERR4815278 | Other | lineage4.8 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR3275321 | Sensitive | lineage3.1.1 | nl | ERR4815651 | Other | lineage2.2.1 | gb | ERR4814329 | Other | lineage4.1.2.1 | None | ERR4814341 | Other | lineage4.7 | None | ERR4814451 | Other | lineage4.3.3 | gb | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4815365 | Sensitive | lineage4.8 | gb | ERR4814554 | Other | lineage4.1 | None | ERR4814472 | Other | lineage4.1 | None | ERR4815680 | Other | lineage1.1.2 | gb | ERR4814524 | Other | lineage4.1.1 | gb | ERR4814584 | Sensitive | lineage4.4.2 | None | ERR4814551 | Other | lineage4.1.2.1 | gb | ERR4815425 | Other | lineage4.5 | gb | ERR4815784 | Other | lineage2.2.1 | gb | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4814617 | Other | lineage1.1.3.1 | None | SRR3675496 | Other | lineage4.1.1.3 | gb | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | ERR4814623 | Other | lineage4.8 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR1665404 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815472 | Other | lineage4.9 | gb | ERR4814674 | Sensitive | lineage3 | gb | ERR4815714 | Sensitive | lineage4.1.2.1 | gb | ERR4814699 | HR-TB | lineage4.1.2.1 | gb | SRR3675227 | Other | lineage4.9 | None | ERR4814714 | Other | lineage3 | None | SRR3675230 | RR-TB | lineage3 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4815467 | Other | lineage3 | None | ERR4814767 | MDR-TB | lineage2.2.1 | None | ERR1750894 | Sensitive | lineage4.9.1 | zw | ERR1750896 | Sensitive | lineage2.2.1 | zw | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR1750921 | Sensitive | lineage4.1.1.3 | None | ERR4814801 | Other | lineage4.8 | gb | ERR4814821 | Other | lineage2.2.1 | None | ERR4815502 | Other | lineage4.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR3675252 | RR-TB | lineage1.1.2 | None | SRR3675261 | Other | lineage1.2.1.1 | None | SRR3675256 | Other | lineage4.7 | None | ERR4814841 | Other | lineage4.1 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SRR3675276 | Other | lineage4.1.2.1 | gb | ERR4814867 | Other | La1.2.BCG | gb | ERR4814911 | Other | lineage4.3.3 | None | ERR4815738 | Other | lineage3 | None | ERR4814905 | Other | lineage4.8 | gb | SRR3675282 | Other | None | SRR3675288 | Other | lineage3 | None | ERR4814930 | Other | lineage4.4.1.1 | None | SRR3675291 | Sensitive | lineage4.6 | gb | ERR4814952 | Sensitive | lineage3 | None | ERR4815061 | Sensitive | lineage3 | None | ERR4814986 | Other | lineage4.3.4.2 | None | ERR4815005 | Other | lineage4.1.2.1 | None | ERR4815869 | Other | lineage3 | gb | ERR4815837 | Other | lineage4.1.4 | gb | SRR3675509 | Other | lineage4.9 | None | ERR4815080 | Other | lineage4.1.2.1 | None | ERR4815910 | Other | lineage4.1.2.1 | None | SRR3675511 | Sensitive | lineage4.6 | None | ERR4816954 | Other | lineage4.1.2.1 | None | ERR4815917 | Other | lineage2.2.1 | gb | ERR4815919 | Other | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4815936 | Other | lineage1.1.2 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2446580 | Sensitive | lineage3.1.1 | nl | ERR2027230 | Other | lineage4.2.2.2 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR4816186 | Sensitive | lineage3 | gb | ERR4817047 | Other | lineage4.2.2.1 | gb | ERR4817043 | Sensitive | lineage4.8.2 | gb | ERR4816232 | Other | lineage4 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816283 | Other | lineage4.1.2.1 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4816968 | Other | lineage4.2.1 | gb | ERR4816008 | Other | lineage1.1.3.3 | gb | ERR2027250 | Other | lineage3.1.2 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816183 | Other | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4817025 | Sensitive | lineage2.2.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4817046 | Other | lineage3 | None | ERR4816243 | Sensitive | lineage3 | None | ERR4816293 | Other | lineage4.1.2.1 | None | SRR3675565 | Other | lineage3 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR2229148 | Other | lineage4.8 | dk |
|---|
