EBG00000313339 - n.2239A>G


Drug resistance types
34 Sensitive 42 RR-TB 11 HR-TB 52 MDR-TB 26 Pre-XDR-TB 0 XDR-TB 187 Other
lineage Counts
lineage Count
lineage4.8 22
lineage4.1.2.1 13
lineage4.3.2 1
lineage2.2.1 64
lineage3.1.1 12
lineage1.1.2 3
lineage4.3.1.1 4
lineage4.1.2 7
lineage4.3;lineage4.9 1
lineage4 2
lineage3 29
lineage4.3.3 14
lineage4.9 37
lineage4.1.1.3.1 2
lineage4.4.2 2
lineage3.1.2.1 3
La1.3 5
lineage4.1.1.1 5
lineage4.8.2 2
lineage4.1.1.3 7
lineage4.3.2.1 2
lineage4.4.1.1 7
lineage4.4.1.1.1 3
lineage1.2.1.2.1 2
lineage4.3.4.1;lineage4.9 2
lineage2.2.2 7
lineage4.6.2.2 4
lineage4.3.4.1 6
lineage4.3 1
lineage4.6.5 1
M.canetti;lineage4.9 1
La1.8.1 9
lineage4.3.4.2 1
La1;lineage4.9 1
lineage4.1.2.1;lineage4.9 1
lineage4.4.1.2 1
lineage4.8.1 2
lineage4.6.1.2 5
lineage4.1.1.3.1;lineage4.9 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.2.2.2 5
lineage4.3.4.2.1 4
lineage3.1.2.2 2
lineage5.1.1 1
lineage1.2.2.2 6
lineage6.1.3 1
lineage3;lineage4 1
La2 1
La1.7.1 3
lineage4.5 2
lineage4.7 2
lineage4.2.1 4
lineage4.3.3;lineage4.8 4
lineage4.6.1.1 1
lineage4.2.2 2
lineage4.1.1.2 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage1.1.2;lineage6.2.3 1
lineage2.2.1.1 3
lineage1.2.1.1 2
lineage4.6 1
lineage3.1.1;lineage4 1
lineage4.2.1.1 2
lineage6.1.2 1
lineage4.3.3;lineage4.9 1
lineage2.2.1.2 1
lineage3.1.2.1;lineage4.9 1
lineage1.1.1.1 1
lineage3.1.3 1
lineage1.1.3.1 1
lineage4.1.3 1
spoligotype Counts
spoligotype Count
None 352
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6855695 Sensitive lineage4.8 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
ERR10796561 Other lineage4.3.2 None
SRR18002930 MDR-TB lineage2.2.1 None
ERR2446580 Sensitive lineage3.1.1 nl
SRR11567803 Pre-XDR-TB lineage2.2.1 None
SRR5007204 Other lineage4.1.2.1 None
SRR6045424 Other lineage1.1.2 None
SRR9971114 Other lineage2.2.1 None
SRR15315797 RR-TB lineage2.2.1 None
ERR9117812 Other lineage4.3.1.1 None
SRR7069347 Other lineage4.1.2.1 None
ERR3275321 Sensitive lineage3.1.1 nl
SRR11349193 RR-TB lineage4.1.2 None
ERR036207 Other lineage4.3;lineage4.9 None
ERR10762318 Pre-XDR-TB lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
ERR2515230 Sensitive lineage4.8 None
SRR3675565 Other lineage4 None
SRR13180204 Other lineage3 None
SRR18002933 Other lineage2.2.1 None
ERR10796628 Other lineage4.3.3 None
ERR10796564 Other lineage4.3.3 None
ERR5162090 RR-TB lineage4.9 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR15316595 RR-TB lineage4.4.2 None
SRR7069800 Other lineage3.1.2.1 None
ERR4821276 Sensitive lineage3 None
SRR7069835 Other lineage2.2.1 None
SRR7070080 Pre-XDR-TB lineage3 None
SRR6044983 Other lineage3.1.1 None
ERR4769408 Other La1.3 None
ERR9117740 Other lineage3.1.1 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR2027257 Other lineage4.1.2.1 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR7131114 Other lineage4.1.2 None
SRR5007169 RR-TB lineage4.8.2 None
SRR6045603 Other lineage4.1.1.3 None
SRR7131121 Other lineage4.3.3 None
ERR867567 RR-TB lineage3 None
SRR18002976 Other lineage2.2.1 None
ERR10796623 Other lineage4.1.1.1 None
SRR11342686 MDR-TB lineage4.8 None
SRR10315696 Sensitive lineage4.3.2.1 None
SRR6046521 Other lineage4.4.1.1 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR10796563 Other lineage4.3.3 None
SRR9971201 MDR-TB lineage4.4.1.1.1 None
SRR3675461 RR-TB lineage4.9 None
SRR7069128 Other lineage1.2.1.2.1 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
ERR4816667 Other lineage2.2.2 None
SRR7131251 Other lineage2.2.1 None
SRR16157123 Other lineage4.9 None
ERR9117699 Other lineage4.1.2.1 None
SRR11342689 Other lineage4.1.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR9896153 RR-TB lineage4.4.1.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
ERR4769436 Other La1.3 None
ERR10796558 Sensitive lineage4.3.4.1;lineage4.9 None
SRR7131004 Other lineage4.6.2.2 None
ERR10796582 Other lineage4.3.4.1 None
ERR10796593 Other lineage4.3 None
ERR3276170 Other lineage4.1.2.1 nl
ERR4769552 Sensitive La1.3 None
SRR6046848 Other lineage4.6.5 None
SRR6045705 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR4769516 Sensitive lineage4.9 None
SRR6044904 Other lineage3 None
SRR1180446 Other lineage4.9 None
SRR1183080 Other lineage4.9 None
SRR14179705 Pre-XDR-TB lineage3 None
ERR10796554 Sensitive lineage4.1.2 None
SRR14801652 HR-TB lineage4.3.3 None
SRR16156697 RR-TB lineage2.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR9971113 Other lineage2.2.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR1792022 Other La1.8.1 None
SRR3675527 Other lineage4.9 None
SRR6045422 Other lineage4.3.1.1 None
SRR7069027 MDR-TB lineage4.3.4.2 None
SRR1792012 Other La1.8.1 None
SRR9971029 MDR-TB lineage2.2.2 None
ERR3283006 RR-TB lineage4.9 None
ERR4769514 Other La1.3 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR10796577 Other lineage4.9 None
SRR6045743 Other lineage3 None
SRR6153150 Other lineage3.1.1 None
SRR19241806 Sensitive lineage4.1.2.1 None
SRR11342695 MDR-TB lineage4.8 None
ERR5917985 MDR-TB lineage2.2.1 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR1181256 Other lineage4.9 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR2100067 Other lineage4.3.3 None
SRR7069249 Sensitive lineage3 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR7070195 Sensitive lineage3.1.2.1 None
SRR6045002 RR-TB lineage4.9 None
SRR6045565 Other lineage4.6.2.2 None
SRR18911231 Sensitive lineage4.1.1.3 None
ERR867544 Other lineage4.9 None
ERR10796627 Other lineage4.1.2.1;lineage4.9 None
SRR7069314 Other lineage3 None
SRR19304057 Sensitive lineage4.4.1.2 None
ERR10796591 Other lineage4.9 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18213736 Other lineage3 None
SRR10379910 MDR-TB lineage4.3.3 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
ERR4808964 RR-TB lineage2.2.1 None
SRR22048536 Other lineage4.3.3 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
SRR5007165 Other lineage3 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR1181403 Other lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR18003015 MDR-TB lineage2.2.1 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR7069931 Other lineage4.2.2.2 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR176817 Sensitive lineage4.3.4.2.1 mw
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR19303820 RR-TB lineage4.8 None
SRR6046440 Other lineage3.1.2.2 None
SRR1173719 Other lineage4.9 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
ERR751345 Other lineage5.1.1 None
ERR10796640 Other lineage4.1.2.1 None
ERR9117827 Other lineage1.2.2.2 None
SRR6046616 Other lineage4.3.1.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR6045957 Other lineage4.9 None
SRR7070461 Other lineage3 None
SRR7070609 Other lineage4.2.2.2 None
ERR2600609 Other lineage4.8 None
SRR6046117 Other lineage4.9 None
ERR10796571 Other lineage4.9 None
ERR3806588 Other lineage6.1.3 None
SRR7070320 Other lineage4.8 None
SRR7131068 Other lineage4.8 None
ERR171135 Other lineage2.2.1 za
ERR867575 Other lineage4.9 None
ERR228180 Sensitive lineage3 None
SRR7070369 Other lineage1.2.2.2 None
ERR10796618 Other lineage4.3.4.1 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
ERR10796620 Other lineage4.1.1.1 None
SRR6045267 RR-TB lineage4.8 None
ERR4769506 Sensitive lineage4.9 None
SRR6044784 Other lineage3 None
SRR3675230 Other lineage3;lineage4 None
ERR4811708 HR-TB lineage4 None
SRR10315751 MDR-TB lineage4.8 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR867554 Other lineage4.3.4.1 None
SRR6045056 Other lineage2.2.1 gb
SRR6045516 Other lineage3.1.1 None
SRR6046020 Other lineage3 None
ERR5087846 Other La1.8.1 None
ERR4812328 Other lineage4.3.3 pe
SRR13888750 Other La2 None
SRR21469201 Other La1.7.1 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4830887 Pre-XDR-TB lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR11342688 Other lineage4.2.2.2 None
SRR6044841 Other lineage4.9 None
SRR6046246 Other lineage3 None
SRR18003007 MDR-TB lineage4.5 None
ERR10796595 Other lineage4.9 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR7070329 Other lineage3 None
SRR6045125 Other lineage1.1.2 None
SRR18002967 HR-TB lineage2.2.1 None
SRR6046359 Other lineage4.7 None
ERR867541 MDR-TB lineage4.2.1 None
SRR7069137 Other lineage4.8 None
ERR3439489 RR-TB La1.8.1 None
SRR7069957 Sensitive lineage4.1.2.1 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
SRR6045928 Other lineage4.9 None
ERR10796583 Other lineage2.2.1 None
SRR7069319 Other lineage4.5 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR3797062 RR-TB lineage4.9 None
ERR1023509 Other lineage4.9 None
SRR7069858 Other lineage1.2.1.2.1 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR10796552 Sensitive lineage4.3.4.1 None
ERR2886463 Sensitive lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
ERR3275615 Sensitive lineage4.4.1.1 nl
SRR18002961 Other lineage2.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
ERR10796553 Other lineage4.9 None
ERR8975044 Other lineage4.1.1.2 None
DRR188816 Sensitive lineage4.2.2 None
SRR18002926 Other lineage2.2.1 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR9971112 Other lineage2.2.1 None
SRR6046159 Other lineage4.8.2 None
SRR21469202 Other La1.7.1 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
SRR7068863 Sensitive lineage4.6.2.2 None
SRR1792011 Other La1.8.1 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
ERR4769555 Sensitive La1.3 None
ERR10796636 Other lineage4.1.2.1 None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR7070134 Other lineage3.1.1 None
SRR6046291 Other lineage3 None
SRR6046766 Other lineage3.1.1 None
SRR11349207 RR-TB lineage2.2.1 None
SRR9971046 MDR-TB lineage4.8 None
ERR10796635 Other lineage4.8 None
SRR13423546 Other lineage4.4.2 None
ERR10796555 Other lineage4.1.2.1 None
ERR228175 Sensitive lineage3 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR5007170 Other lineage4.9 None
ERR038289 Other lineage4.3.3 None
ERR10796599 Other lineage4.8 None
SRR15508556 Other lineage4.3.4.1 None
SRR18002888 RR-TB lineage2.2.1 None
SRR1173310 Other lineage3.1.1 None
SRR6046343 Other lineage2.2.1 None
SRR7131287 Other lineage2.2.1.1 None
SRR10315693 RR-TB lineage4.1.2 None
ERR4817915 Other lineage4.9 None
SRR7069097 Other lineage3.1.2.1 None
ERR9117732 Other lineage1.2.2.2 None
ERR10762495 MDR-TB lineage2.2.1 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR3675261 Other lineage1.2.1.1 None
SRR6044936 Other lineage4.6 None
SRR7068875 Other lineage3.1.2.2 None
SRR6046275 Other lineage3.1.1;lineage4 None
ERR10796562 Other lineage4.3.4.1 None
SRR7069922 Other lineage2.2.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR7070223 HR-TB lineage3 None
SRR9971088 RR-TB lineage2.2.1 None
SRR11342658 RR-TB lineage4.1.2 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR11342684 HR-TB lineage4.4.1.1 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
SRR1792025 Other La1.8.1 None
SRR1180440 Other lineage4.9 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR6046815 Other lineage3 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR6045485 Other lineage4.9 None
SRR21469200 Other La1.7.1 None
SRR1735596 RR-TB lineage4.9 None
SRR10869254 Pre-XDR-TB lineage2.2.1 None
ERR4586795 Other La1.8.1 None
SRR11342669 Other lineage4.8 None
SRR7069954 Other lineage1.2.2.2 None
SRR6824501 Pre-XDR-TB lineage2.2.1 None
SRR3675552 Other lineage4.9 None
SRR7068873 Other lineage4.8 None
SRR7069518 Other lineage4.8 None
SRR18909918 Other lineage2.2.1.1 None
SRR6397640 Other lineage4.2.1.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR867526 MDR-TB lineage2.2.1 None
SRR19304115 Other lineage4.1.2.1 None
ERR987707 MDR-TB lineage4.7 None
SRR19303796 Other lineage4.3.3 None
SRR10315579 Other lineage2.2.1.1 None
SRR5818647 Other lineage4.3.4.2.1 None
SRR19304094 Other lineage6.1.2 None
SRR1062880 MDR-TB lineage4.6.1.2 None
ERR5087596 Other La1.8.1 None
SRR7131296 Other lineage4.3.3 None
ERR10796615 Other lineage4.3.3;lineage4.9 None
SRR7070293 Other lineage4.8 None
SRR7069193 Other lineage4.3.1.1 None
SRR10315567 HR-TB lineage2.2.1 None
SRR7070230 Other lineage2.2.1.2 None
SRR7070479 Other lineage4.1.2 None
SRR11349208 MDR-TB lineage2.2.1 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR5818586 RR-TB lineage4.2.2.2 None
SAMN02585982 MDR-TB lineage4.3.3 None
SRR7069669 Other lineage3.1.1 None
SRR7069030 Other lineage3 None
ERR9117788 Other lineage3 None
SRR6046668 Sensitive lineage1.1.2 gb
SRR1792024 Other La1.8.1 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18213726 Other lineage3 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR867522 Pre-XDR-TB lineage2.2.1 None
SRR11342638 MDR-TB lineage4.4.1.1.1 None
SRR7070571 Sensitive lineage3 None
SRR7069648 Other lineage4.6.2.2 None
DRR185000 Other lineage1.1.1.1 None
ERR9285979 RR-TB lineage3.1.1 None
SRR11342634 MDR-TB lineage4.8 None
SRR14801720 Other lineage4.8 None
SRR9971065 RR-TB lineage2.2.1 None
ERR10762248 MDR-TB lineage4.2.1 None
SRR7068998 Sensitive lineage3.1.3 None
SRR9971144 RR-TB lineage2.2.1 None
ERR10796578 Other lineage2.2.1 None
SRR4033549 Other lineage2.2.2 None
SRR11349153 RR-TB lineage4.1.1.1 None
ERR502470 RR-TB lineage4.9 None
SRR9971080 RR-TB lineage2.2.1 None
SRR22048484 Sensitive lineage4.8 None
SRR6046463 Other lineage4.4.1.1 None
SRR9971032 RR-TB lineage2.2.1 None
ERR2509886 Other lineage3 None
ERR10796598 Other lineage4.9 None
SRR6785281 Other lineage4.2.1.1 None
SRR7070515 Other lineage1.1.3.1 None
ERR212114 Other lineage4.3.4.2.1 None
ERR867573 Other lineage4.9 None
ERR1034647 MDR-TB lineage4.1.1.3 None
SRR11342655 MDR-TB lineage2.2.1 None
SRR18002987 Other lineage2.2.1 None
ERR4830892 Pre-XDR-TB lineage2.2.1 None
SRR7068927 Other lineage1.2.2.2 None
SRR1735598 RR-TB lineage4.9 None
ERR10762297 MDR-TB lineage4.2.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR7585400 MDR-TB lineage3 None
SRR11342646 HR-TB lineage3 None
ERR867521 MDR-TB lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR11342671 RR-TB lineage4.1.3 None
SRR5818672 Other lineage1.2.2.2 None
ERR9811805 MDR-TB lineage4.8 None
ERR4820503 Sensitive lineage2.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None