Rv0668 - c.1236G>T
Drug resistance types
19 Sensitive
18 RR-TB
16 HR-TB
21 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 17 |
| lineage1.2.2.2 | 1 |
| lineage4.2.1 | 2 |
| lineage4 | 2 |
| lineage4.3.1 | 1 |
| lineage4.9 | 32 |
| lineage3 | 10 |
| lineage4.3.4.1 | 2 |
| La1.2 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.2 | 3 |
| lineage4.3.3 | 4 |
| lineage4.9.1 | 1 |
| La1.7.1 | 1 |
| La1.8.1 | 6 |
| lineage4.6.2.2 | 1 |
| lineage4.1.1.1 | 3 |
| lineage3;lineage4.9 | 2 |
| lineage3;lineage4 | 1 |
| lineage4.1.2.1 | 4 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage3.1.2.1 | 3 |
| lineage1.2.2 | 1 |
| lineage4.3.4.2 | 3 |
| lineage4.4.1.1 | 4 |
| La2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.1.1.3 | 2 |
| La1.3 | 1 |
| lineage5 | 1 |
| lineage2.2.2 | 3 |
| lineage3.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.8 | 5 |
| lineage4.7 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage6.1.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.6 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.3 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 140 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR4821007 | Other | lineage1.2.2.2 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4829333 | Other | lineage4 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | SRR15508556 | Other | lineage4.3.4.1 | None | ERR4769418 | Other | La1.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR037504 | Other | lineage4.9.1 | None | ERR2509886 | Other | lineage3 | None | SRR21469202 | Other | La1.7.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4821176 | Other | lineage2.2.1 | None | ERR2512986 | Other | lineage3 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4817204 | Other | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | ERR4820817 | Other | lineage4.1.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | ERR4818126 | Other | lineage1.2.2 | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | ERR4819528 | RR-TB | lineage3 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4821746 | Sensitive | lineage4.4.1.1 | gb | SRR13888750 | Other | La2 | None | ERR4816470 | HR-TB | lineage3 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR4188213 | Other | La1.8.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR1792025 | Other | La1.8.1 | None | ERR4769436 | Other | La1.3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR4816967 | Other | lineage5 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR3468488 | Other | La1.8.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | ERR4820151 | Other | lineage4.8 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4819948 | Other | lineage4.4.1.1 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR2513259 | Other | lineage3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4819772 | Other | lineage1.1.3.1 | None | SRR7236233 | Other | La1.8.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR1063855 | Other | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | lineage4 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR5311077 | Other | La1.8.1 | None | ERR4815471 | HR-TB | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | ERR5979407 | Other | lineage3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR4814748 | Other | lineage4.8 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4821572 | Sensitive | lineage2.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR6044936 | Other | lineage4.6 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR4822104 | Other | lineage3;lineage4.9 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | ERR4821143 | Other | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR4816964 | HR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4816322 | Other | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | ERR4818065 | Other | lineage4.1.2.1 | None | SRR1183067 | Other | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None |
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