Rv0668 - c.1236G>T
Drug resistance types
17 Sensitive
59 RR-TB
17 HR-TB
18 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
109 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 5 |
| lineage4 | 12 |
| lineage1.1.2 | 2 |
| lineage4.9 | 40 |
| La1.2 | 1 |
| La1.3 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage3 | 27 |
| lineage4.3.4.2 | 3 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage2.2.1 | 21 |
| lineage6 | 1 |
| lineage4.3 | 1 |
| lineage4.6.2.2 | 4 |
| lineage2.2 | 1 |
| lineage4.1.1 | 3 |
| lineage4.3.2.1 | 2 |
| lineage2.2.2 | 3 |
| lineage4.8 | 13 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.3 | 6 |
| lineage3.1.1 | 6 |
| La2 | 1 |
| lineage4.3.4.1 | 2 |
| La1.7.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage1.2.2 | 1 |
| lineage4.1.2 | 5 |
| lineage4.2.1 | 3 |
| lineage4.7 | 5 |
| lineage4.1 | 2 |
| lineage1.2.1.1 | 2 |
| lineage2.2.1.1 | 2 |
| lineage5 | 1 |
| lineage4.1.2.1 | 9 |
| lineage3.1.2.1 | 5 |
| lineage3.1 | 1 |
| 8 | |
| lineage4.2.2.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.5 | 1 |
| lineage1 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage1.1.3.1 | 2 |
| lineage4.4.1.1 | 5 |
| lineage3.1.2.2 | 3 |
| lineage1.2.2.2 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage2.1 | 1 |
| lineage4.3.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 234 |
Geographic prevalence
Country level data for this variant is available for 15 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3468488 | RR-TB | La1.8.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4596906 | Sensitive | lineage1.1.2 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769436 | Other | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769472 | Other | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR5979407 | Other | lineage3 | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR5865993 | MDR-TB | lineage2.2.1 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR9787336 | Other | lineage6 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | SRR13888750 | Other | La2 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21469202 | Other | La1.7.1 | None | SRR21469201 | Other | La1.7.1 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | ERR4815777 | Other | lineage4.9 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4814312 | Other | lineage4 | None | ERR4814496 | RR-TB | lineage4.1.2 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4815394 | RR-TB | lineage4.2.1 | None | ERR4814714 | Other | lineage3 | None | ERR4815698 | RR-TB | lineage4.7 | None | ERR4815471 | Other | lineage4.9 | None | ERR4814748 | Other | lineage4.8 | None | ERR4814841 | Other | lineage4.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814763 | Other | lineage2.2.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4815528 | Other | lineage4.8 | None | ERR4814976 | Other | lineage4.9 | None | ERR4816967 | RR-TB | lineage5 | None | ERR2229541 | Other | lineage4.8 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4815909 | Other | lineage4.8 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4816964 | Other | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4816183 | Other | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4817060 | RR-TB | None | ERR4817047 | Other | lineage4.2.2.1 | gb | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816604 | RR-TB | lineage4.1.2 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816631 | Other | lineage2.2.1 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR2229366 | Other | lineage4.8 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510796 | HR-TB | lineage4.3.4.2 | it | ERR4816756 | RR-TB | None | ERR4816852 | Other | lineage4.9 | None | ERR2245283 | Other | lineage3.1.1 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR2512986 | Other | lineage3 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817874 | Other | lineage3 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR2510790 | Other | lineage4.6.2.2 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818763 | Other | lineage3 | gb | ERR4818065 | Other | lineage4.1.2.1 | None | ERR2513259 | Other | lineage3 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818498 | Other | lineage3.1.2.1 | gb | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR2509886 | RR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4817555 | RR-TB | lineage3 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4817552 | Sensitive | lineage2.2.1.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR4819357 | Other | lineage4.9 | None | ERR4820324 | Other | lineage4 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819456 | Other | lineage4.8 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4819462 | Other | lineage4 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819515 | HR-TB | lineage4.2.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819615 | Other | lineage4.3.4.2.1 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR2514655 | Sensitive | lineage3 | None | ERR2514565 | Other | lineage3.1.2.1 | gb | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR2514834 | Other | lineage4.7 | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4819933 | Other | lineage4.9 | None | ERR4820833 | HR-TB | None | ERR2514854 | Other | lineage4.3.3 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4821915 | RR-TB | lineage4.9 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820184 | MDR-TB | lineage3 | gb | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821167 | Other | lineage4.8 | gb | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515032 | Other | lineage3 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4822169 | Other | lineage4.1.1.3 | gb | ERR4821408 | Sensitive | lineage4.1.2 | None | ERR4822104 | RR-TB | lineage3 | None | ERR4822085 | Other | lineage4.8 | gb | SRR6044936 | Other | lineage4 | None | ERR4821572 | Other | lineage2.1 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821746 | Other | lineage4.4.1.1 | gb | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045928 | Other | lineage4.9 | None | ERR4822222 | Other | lineage3.1.2.2 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045957 | Other | lineage4.9 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR6046020 | Other | lineage3 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046359 | Other | lineage4.7 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR4829333 | RR-TB | lineage4 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046815 | Other | lineage3 | None | SRR6046839 | Other | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046376 | Other | lineage3 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046729 | Other | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR037504 | Other | lineage4.9.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | DRR184629 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR1063855 | Other | lineage4 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR3283043 | Other | lineage4.9 | None |
|---|
