EBG00000313339 - n.1097delC


Drug resistance types
146 Sensitive 72 RR-TB 53 HR-TB 101 MDR-TB 41 Pre-XDR-TB 3 XDR-TB 332 Other
lineage Counts
lineage Count
17
lineage4 33
lineage4.4.1 1
lineage4.7 11
lineage1.2.1.1 2
lineage3 49
lineage3.1.2.1 2
lineage4.9 153
lineage4.8 38
lineage3.1.2 5
lineage4.2.2.2 9
lineage4.1.2.1 32
lineage4.4.1.1 19
lineage3.1 2
lineage1.1.2 7
lineage4;lineage2 1
lineage4.1.1.3 13
lineage2.2.2 7
lineage4.6.1.2 6
lineage2.2.1 112
lineage4.3 3
lineage4.3.2 4
lineage4;lineage3 1
lineage4.1.1.3.1 3
lineage4.6 2
lineage1.1.1 3
lineage4.3.4.2.1 5
lineage1.2.1.2.1 2
lineage4.3.2.1 9
lineage4.3.1.1 5
lineage6.1.3 1
lineage3.1.1 12
lineage4.3.4.1 8
lineage1.1.3.1 2
lineage4.6.2.2 5
lineage3.1.3 3
lineage4.2.1 8
lineage3.1.2.2 6
lineage4.4 3
lineage1.2.2.2 4
lineage4.1.1.2 2
lineage1.1.3.3 1
lineage4.1.2 6
lineage1.1.1.1 2
lineage4.6.5 1
lineage2.2.1;lineage1.1.1 1
La1.3 12
lineage1.1.3.2 2
lineage4.3.3 18
lineage4.1.1 11
lineage4.1 1
lineage4;lineage2.2.1 1
lineage2.2 5
La1.8.1 18
lineage5.1.1 2
lineage4.3.4.2 1
lineage2.2.1.1 6
lineage4.6.1.1 1
lineage4.4.2 2
lineage4.8.1 2
La1.2 4
lineage4.2.2 2
lineage4.9;lineage1.1 1
lineage4.9;lineage4.3.4 1
lineage4.3.4 1
lineage4.4.1.2 2
lineage4.1.4 1
La1.7.X-unk4 1
lineage6.2.3;lineage1.1.2 1
lineage6 4
lineage4.9;La1.8 1
lineage4.9;La1.3 2
lineage4.5;lineage2.2.1 1
lineage2.1 1
lineage4.8.2 1
lineage1.2.1.2 2
lineage4.4.1.1.1 5
lineage4.8;lineage4.3.3 4
lineage4.6.3 1
lineage4.9;lineage2.2 1
lineage2 1
La2 1
La1.4 1
lineage4.2.2.1 1
lineage4.5 1
La1.7.1 3
spoligotype Counts
spoligotype Count
None 748
Geographic prevalence
Country level data for this variant is available for 15 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675234 Other None
ERR1750908 Sensitive lineage4 None
ERR1750938 Other lineage4.4.1 None
SRR3675256 Other lineage4.7 None
SRR3675261 Other lineage1.2.1.1 None
ERR2179857 RR-TB lineage4 None
ERR4815075 MDR-TB lineage3 None
ERR4815022 Other lineage3.1.2.1 None
ERR4814976 Other lineage4.9 None
SRR3675527 RR-TB lineage4.9 None
SRR3675509 Other lineage4.9 None
ERR4815079 RR-TB lineage3 None
ERR4816964 Other lineage4.9 None
SRR3675525 Other lineage4.8 None
ERR2027250 Other lineage3.1.2 None
ERR4816417 Other lineage4.9 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027230 Other lineage4.2.2.2 None
ERR2027257 Other lineage4.1.2.1 None
ERR2027255 HR-TB lineage4.4.1.1 None
ERR2027290 RR-TB lineage3.1 None
SRR3675552 RR-TB lineage4.9 None
ERR4816231 Other lineage4 None
ERR4816322 Other lineage4.9 None
ERR4817069 RR-TB None
ERR4816470 Other lineage3 None
ERR4817109 Other lineage3 None
ERR2229198 MDR-TB lineage4.8 None
ERR4816571 Other lineage1.1.2 None
ERR216965 HR-TB lineage4.9 None
ERR4817434 Other lineage3 None
ERR4816734 Sensitive lineage4.9 None
ERR4816762 Other lineage4;lineage2 None
ERR4816852 Other lineage4.9 None
ERR4816833 Other lineage4.1.1.3 None
SRR4033549 HR-TB lineage2.2.2 None
ERR4816868 Other lineage4.4.1.1 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4817667 HR-TB lineage4.8 None
ERR4815815 Sensitive lineage4 None
ERR2513405 Other lineage2.2.1 None
ERR4818710 Sensitive lineage4.9 None
ERR228175 Sensitive lineage3 None
ERR2510736 Other lineage4.1.2.1 None
ERR4818261 Other lineage1.1.2 None
ERR3275190 Other lineage3 nl
ERR4818831 Other lineage3 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR2432997 Other lineage4.8 None
ERR4818536 Other lineage4.9 None
ERR3275941 RR-TB lineage4.3 nl
ERR2513229 MDR-TB lineage2.2.1 None
ERR4818272 Other lineage4.3.2 None
ERR3276170 Other lineage4.1.2.1 nl
ERR2513259 Other lineage3 None
ERR4818952 Other lineage3 None
ERR3275709 HR-TB lineage3 nl
ERR4818561 HR-TB lineage4 None
SRR5007163 MDR-TB lineage4;lineage3 None
SRR5007155 HR-TB lineage4.1.2.1 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007165 MDR-TB lineage3 None
SRR5007180 Other None
SRR5007170 RR-TB lineage4.9 None
SRR5007186 Other lineage4.6 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR4817556 Sensitive lineage4.2.2.2 None
ERR4819314 Other lineage1.1.1 None
ERR4818624 Other lineage4.3.4.2.1 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR4819357 Other lineage4.9 None
ERR4819462 Other lineage4 None
ERR4819910 Other lineage4.9 None
ERR4819546 HR-TB lineage3 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR6153166 Other lineage1.2.1.2.1 ca
SRR2101651 Sensitive lineage4.3.2.1 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR1023509 Other None
ERR4820193 Other lineage3 None
ERR2446509 Other lineage3 nl
ERR4819933 Other lineage4.9 None
ERR4820130 Other lineage3 None
ERR2515230 Sensitive lineage4.8 None
ERR4821769 Other lineage4.1.2.1 None
SRR6046089 Other lineage4.1.2.1 None
SRR6045422 Other lineage4.3.1.1 None
SRR6045445 Other lineage4.3.1.1 None
ERR4821057 HR-TB lineage4 None
SRR6046117 RR-TB lineage4.9 None
SRR6045485 Other lineage4.9 None
SRR6045537 Pre-XDR-TB lineage2.2.1 None
SRR6045464 Other lineage4.1.1.3 None
SRR6045496 Other lineage6.1.3 None
SRR6045516 Other lineage3.1.1 None
ERR4821288 Other lineage4.7 None
ERR4822217 Sensitive lineage4.3.4.1 None
ERR4822138 Other lineage4.1.2.1 None
ERR4821616 Other lineage1.1.3.1 None
SRR6046113 Other lineage4.1.1.3 None
SRR6045565 Other lineage4.6.2.2 None
SRR6045621 Other lineage4.1.1.3 None
SRR6045599 Other lineage4.8 None
SRR6045614 Other lineage4.8 None
SRR6045591 Other lineage4.1.2.1 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045613 Other lineage3.1.3 None
SRR6046135 Other lineage4.1.2.1 None
SRR6045683 Other lineage3.1.2 None
SRR6045664 Other lineage4.2.1 None
SRR6045642 Other lineage3.1.2.2 None
SRR6045743 Other lineage3 None
SRR6045705 Other lineage4.9 None
SRR6046141 Other lineage4.9 None
SRR5818572 Sensitive lineage4.2.2.2 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6045778 Other lineage3.1 None
SRR6045805 Other lineage4.3.1.1 None
SRR5818624 Sensitive lineage3 None
SRR5818622 Sensitive lineage4.2.2.2 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6044787 Other lineage4.4 None
SRR6045832 HR-TB lineage4.9 None
SRR5818690 Other lineage4.2.2.2 None
SRR5818672 Other lineage1.2.2.2 None
SRR6045843 Other lineage4.2.2.2 None
SRR6045894 Other lineage4.8 None
SRR6044784 MDR-TB lineage3 None
SRR6044817 Other lineage3 None
SRR6044872 Sensitive lineage3.1.2.1 None
SRR6044841 Other lineage4.9 None
SRR6044904 Other lineage3 None
SRR6045928 Other lineage4.9 None
SRR6045944 Other lineage4.1.2.1 None
SRR6045957 Other lineage4.9 None
SRR6044936 Other lineage4 None
SRR6044952 RR-TB lineage4.9 None
SRR6044983 Other lineage3.1.1 None
SRR6044958 Other lineage4.4.1.1 None
SRR6046177 Other lineage3.1.2 None
SRR6045017 Other lineage3.1.2.2 None
SRR6045158 Other lineage4.9 None
SRR6044993 Other lineage3 None
SRR6045024 Other lineage4.1.1.2 None
SRR6045125 Other lineage1.1.2 None
SRR6045138 Other lineage3.1.1 None
SRR6045159 Other lineage3.1.1 None
SRR6046020 Other lineage3 None
SRR6045178 Other lineage3 None
SRR6045191 Sensitive lineage4.9 None
SRR6045175 Other lineage3.1.2.2 None
SRR6046189 Other lineage4.8 None
SRR6045248 Other lineage3.1.1 None
SRR6045205 Sensitive lineage4.9 None
SRR6045289 Other None
SRR6045267 RR-TB lineage4 None
SRR6045295 Other lineage4.7 None
SRR6046250 Other lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR6045312 Other lineage1.1.3.3 None
SRR6045321 Other lineage1.1.3.1 None
SRR6045384 Other lineage4.1.2 None
SRR6045424 Other lineage1.1.2 None
SRR6046385 Other lineage4.9 None
SRR6046291 Other lineage3 None
SRR6046343 Other lineage2.2.1 None
SRR6046246 Other lineage3 None
SRR6046275 Other lineage3.1.1 None
SRR6046273 Other lineage3.1.2 None
SRR6046281 Other lineage4.9 None
SRR6046359 Other lineage4.7 None
ERR4830888 Pre-XDR-TB lineage2.2.1 None
SRR6046376 Other lineage3 None
ERR2517074 Pre-XDR-TB lineage3 gb
ERR2851356 Sensitive lineage4.9 None
ERR4830887 Pre-XDR-TB lineage2.2.1 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046440 Other lineage3.1.2.2 None
SRR6046463 Other lineage4.4.1.1 None
SRR6046442 Other lineage3 None
SRR6046616 Other lineage4.3.1.1 None
SRR6046534 Other lineage1.1.2 None
SRR6046607 Other lineage3 None
SRR6046641 Other lineage4.8 None
SRR6046612 Other lineage1.1.1.1 None
SRR6046766 Other lineage3.1.1 None
SRR6046655 Other lineage4.1.2.1 None
SRR6046729 Other None
SRR6046701 Other lineage3.1.2.2 None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6046839 Other lineage4.9 None
SRR6046790 Other lineage4.7 None
SRR6046802 Other lineage4 None
SRR6046815 Other lineage3 None
SRR6046848 Other lineage4.6.5 None
SRR6046824 HR-TB None
ERR2843513 Other lineage2.2.1;lineage1.1.1 None
SRR6046852 MDR-TB lineage3 None
SRR6046891 Other lineage4.7 None
SRR6153150 Other lineage3.1.1 None
SRR6367397 Other lineage4.1.2.1 None
ERR3077969 Other La1.3 None
ERR502470 RR-TB lineage4.9 None
ERR323037 HR-TB lineage4 None
ERR2886463 Sensitive lineage2.2.1 None
ERR485006 HR-TB lineage4.9 None
ERR502472 Other lineage4.6.2.2 None
ERR502483 Sensitive lineage4.9 None
ERR502482 Sensitive lineage4.9 None
ERR502485 Sensitive lineage4.9 None
ERR502484 Sensitive lineage4.9 None
ERR502489 Sensitive lineage4.9 None
ERR4972588 MDR-TB lineage4.3.2 None
ERR502486 Sensitive lineage4.9 None
ERR502493 Sensitive lineage4.9 None
ERR502492 Sensitive lineage4.9 None
ERR502490 Sensitive lineage4.9 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR502498 Sensitive lineage4.9 None
ERR502497 Sensitive lineage4.9 None
SRR6982102 Other lineage2.2.1 None
SRR6856087 Sensitive lineage4 None
SRR6856119 Sensitive lineage2.2.1 None
SRR6896178 Sensitive lineage2.2.1 None
SRR6896162 Sensitive lineage4.9 None
SRR6982104 Sensitive lineage2.2.1 None
SRR6982106 Sensitive lineage4.8 None
SRR6982414 Sensitive lineage4.9 None
SRR6982430 Other lineage4.3.4.2.1 None
SRR6982175 Other lineage1.1.3.2 None
SRR6982141 RR-TB lineage4.3.3 None
SRR6896340 HR-TB lineage4.4.1.1 None
SRR6896339 MDR-TB lineage2.2.1 None
SRR6982227 Other lineage4.1.1 None
SRR6982190 Sensitive lineage4.3.3 None
SRR6789624 MDR-TB lineage4.1 None
SRR6982195 RR-TB lineage4.4 None
SRR6982196 Sensitive None
SRR6832644 Other lineage4.3.3 None
SRR6982229 Sensitive lineage2.2.1 None
SRR6896545 Other lineage4.9 None
SRR6982448 Sensitive lineage4;lineage2.2.1 None
SRR6982337 Sensitive lineage4.7 None
SRR6981983 Sensitive lineage3.1.1 None
SRR6981981 Other lineage4.3.3 None
SRR6855721 Sensitive lineage4.3.2.1 None
SRR6982371 Sensitive lineage4.1.1 None
SRR6982385 Sensitive lineage4.1.2 None
SRR6981993 Other lineage4.3.2.1 None
SRR6982014 Other lineage4.1.1 None
SRR6982011 Other lineage4.1.1 None
SRR6855917 Other lineage4.8 None
SRR6855915 Sensitive lineage4.9 None
SRR6982037 Sensitive lineage4.1.1 None
SRR6982026 Sensitive lineage4.3.3 None
SRR6982035 Sensitive lineage4.9 None
SRR6982394 Sensitive lineage4.3.2.1 None
SRR6982050 Sensitive lineage4.3.4.1 None
SRR6982043 Sensitive lineage4.4.1.1 None
SRR6855963 RR-TB lineage2.2.1 None
SRR6982398 MDR-TB lineage2.2 None
SRR6982058 HR-TB lineage2.2.1 None
ERR4815783 Other lineage4.1.2.1 gb
SRR6982076 Sensitive lineage4.9 None
SRR6982405 Sensitive None
SRR6982077 MDR-TB lineage4.3.2.1 None
SRR6856032 Sensitive lineage2.2.1 None
ERR5162118 Other La1.8.1 None
ERR5087596 Other La1.8.1 None
ERR502517 MDR-TB lineage5.1.1 None
ERR5087846 Other La1.8.1 None
ERR5311077 RR-TB La1.8.1 None
ERR5162133 Other La1.8.1 None
ERR5311080 Other La1.8.1 None
SRR6982558 Other lineage4.3.4.2 None
SRR6982514 Sensitive lineage4.3.3 None
SRR7131004 Other lineage4.6.2.2 None
SRR9971246 MDR-TB lineage4.1.1.3 None
SRR9971270 RR-TB lineage2.2.1 None
SRR7131068 Other lineage4.8 None
SRR7131123 Other lineage4.8 None
SRR7131122 Other lineage2.2.1 None
SRR7131098 MDR-TB lineage4.3.3 None
SRR7131287 Other lineage2.2.1.1 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR7496471 Sensitive None
SRR7496523 Other lineage4.7 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR9971372 MDR-TB lineage4.1.1 None
SRR9970980 Other lineage4.1.2 None
SRR9971336 XDR-TB lineage4.3.3 None
SRR7646018 MDR-TB lineage4.2.1 None
SRR7585435 Other lineage4.9 None
SRR7645899 RR-TB lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR7645927 Other lineage4.8 None
SRR7645971 Other lineage2.2.1 None
SRR9971046 MDR-TB lineage4.8 None
SRR7585400 MDR-TB lineage3 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR7645928 RR-TB lineage4.7 None
SRR9971032 RR-TB lineage2.2.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9971065 RR-TB lineage2.2.1 None
SRR9971088 RR-TB lineage2.2.1 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR8651616 MDR-TB lineage2.2.1 None
SRR7755655 Other lineage4.1.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR9971113 Other lineage2.2.1 None
SRR9971122 MDR-TB lineage4.8 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR9971144 RR-TB lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
SRR8902558 Other lineage4.9 None
SRR7851312 Other La1.2 None
ERR323048 Pre-XDR-TB lineage4.9 None
DRR184982 RR-TB lineage2.2.1 None
DRR185000 Other lineage1.1.1.1 None
ERR037234 Sensitive lineage4.9 None
DRR185048 Other lineage2.2.1 None
DRR188816 Sensitive lineage4.2.2 None
ERR4819175 Other lineage4.1.1.3 gb
ERR072033 Sensitive lineage3.1.2.2 None
ERR067712 HR-TB lineage4 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1063855 Other lineage4 None
ERR10762275 MDR-TB lineage4.2.1 None
ERR10762318 Pre-XDR-TB lineage2.2.1 None
ERR10762297 MDR-TB lineage4.2.1 None
ERR10796552 Sensitive lineage4.3.4.1 None
ERR10796555 Other lineage4.1.2.1 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10796558 Sensitive lineage4 None
ERR10796581 HR-TB lineage4.1.2 None
ERR10796561 Other lineage4.3.2 None
ERR10796563 Other lineage4.3.3 None
ERR10796564 Other lineage4.3.3 None
ERR10796566 Other lineage4.9;lineage4.3.4 None
ERR10796565 RR-TB lineage4.9 None
ERR10796578 Other lineage2.2.1 None
ERR10796562 Other lineage4.3.4.1 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796571 Other lineage4.9 None
ERR10796575 RR-TB lineage4.9 None
ERR10796577 RR-TB lineage4.9 None
ERR10796582 HR-TB lineage4.3 None
ERR10796583 Other lineage2.2.1 None
ERR10796589 Other lineage4.9 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796593 RR-TB lineage4 None
ERR10796631 Other lineage4.3.4 None
ERR10796595 Other lineage4.9 None
ERR10796598 RR-TB lineage4.9 None
ERR10796599 Other lineage4 None
ERR10796615 Other lineage4 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796620 Other lineage4.1.1 None
ERR10796596 Other lineage4.9 None
ERR10796627 Other lineage4 None
ERR10796634 Other lineage4 None
ERR10796635 Other lineage4 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR10796640 Other lineage4.1.2.1 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR3283053 Other lineage4.9 None
ERR3283013 MDR-TB lineage4 None
ERR3283046 MDR-TB lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR3283032 HR-TB None
ERR3324328 MDR-TB lineage2.2.1 None
ERR3324351 MDR-TB lineage4.1.4 None
ERR3324347 Sensitive lineage4.1.2.1 None
ERR3445487 Other La1.7.X-unk4 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR3439265 Other lineage4.9 None
ERR3324362 HR-TB lineage4.1.2.1 None
ERR3324373 MDR-TB lineage2.2.1 None
ERR3335798 MDR-TB lineage2.2.1 None
ERR3468488 RR-TB La1.8.1 None
ERR3806588 Other lineage6 None
ERR3468561 HR-TB lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
ERR3468613 RR-TB La1.8.1 None
ERR3797065 MDR-TB lineage4 None
ERR3797074 Sensitive lineage4.9 None
ERR4132460 MDR-TB lineage2.2.1 None
ERR4188010 Other La1.8.1 None
ERR4188255 Other lineage4.9;La1.8 None
ERR4596910 Sensitive lineage4 None
ERR4188253 Other La1.8.1 None
ERR4596902 HR-TB lineage3 None
ERR4627392 Other La1.8.1 None
ERR4627379 Other La1.8.1 None
ERR473303 Sensitive lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR4769408 Other La1.3 None
ERR473367 Sensitive lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769419 Other lineage4.9 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769418 Other La1.2 None
ERR4769423 Other La1.3 None
ERR4769442 HR-TB lineage4 None
ERR4769436 Other La1.3 None
ERR4769444 HR-TB lineage4.9 None
ERR4769495 Other La1.3 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769516 Other La1.3 None
ERR4769503 Other La1.2 None
ERR4769508 RR-TB lineage4.9 None
ERR4769507 Sensitive lineage4.9 None
ERR4769506 Sensitive La1.3 None
ERR4769514 Other La1.3 None
ERR4769527 Sensitive lineage4.9 None
ERR4769551 Other La1.3 None
ERR4769530 RR-TB lineage4.9 None
ERR4769546 Other La1.3 None
ERR4769552 Other La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4769554 RR-TB lineage4.9 None
ERR4769555 Other La1.3 None
ERR4796351 MDR-TB lineage4.9 None
ERR4796577 MDR-TB None
ERR4798823 HR-TB lineage4 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4800197 HR-TB None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR5979454 Pre-XDR-TB lineage3 None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR5865338 MDR-TB lineage2.2 None
ERR5908124 Other lineage4.8 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR5979407 Other lineage3 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6197022 Other lineage4.9 None
ERR6197036 Other lineage4 None
ERR6197026 RR-TB lineage4.9 None
ERR6197030 Other lineage4.9 None
ERR6197028 Other lineage4.9 None
ERR6197034 Other lineage4.9 None
ERR6197042 RR-TB lineage4.9 None
ERR6197038 HR-TB lineage4.9 None
ERR6359066 HR-TB lineage4 None
ERR6358951 HR-TB lineage4 None
ERR6866186 Sensitive lineage4.8 None
ERR6359070 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR6359069 Other lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR736831 HR-TB lineage4.9 None
ERR6866241 Other lineage4.3.2 None
SRR11662417 Pre-XDR-TB lineage2.1 None
ERR736837 Other lineage4.9 None
ERR751345 Other lineage5.1.1 None
ERR8975044 Other lineage4.1.1.2 None
ERR8025347 Sensitive lineage4.9 None
ERR8774355 MDR-TB lineage2.2.1 None
ERR9117747 HR-TB lineage4.8 None
ERR212114 Other lineage4.3.4.2.1 None
ERR9117695 Other lineage4.1.2.1 None
ERR9117704 Other lineage4.6 None
ERR9117725 Other lineage4.1.1 None
ERR9117740 Other lineage3.1.1 None
ERR9117676 Other lineage4.2.2.2 None
ERR9117699 Other lineage4.1.2.1 None
ERR9117732 Other lineage1.2.2.2 None
ERR9117763 HR-TB lineage3 None
ERR9117760 HR-TB lineage4.3 None
ERR9117781 Other lineage3.1.3 None
ERR9117759 Other lineage3 None
ERR9117788 Other lineage3 None
ERR9117806 Other lineage4.8 None
ERR9117789 Sensitive lineage4.8 None
ERR9117812 Other lineage4.3.1.1 None
ERR9117822 Sensitive lineage4.1.2.1 None
ERR9117841 Other lineage4.8.2 None
ERR9117823 Other lineage1.1.1 None
ERR9117827 Other lineage1.2.2.2 None
ERR9285979 RR-TB lineage3.1.1 None
ERR9119120 Other lineage4.8 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR9786076 Sensitive lineage3 None
ERR9786276 Sensitive lineage4.8 None
ERR9786613 Sensitive lineage4.1.2.1 None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR983241 MDR-TB lineage2.2.1 None
ERR9787033 Sensitive lineage6 None
ERR9787336 Other lineage6 None
ERR9811805 MDR-TB lineage4.8 None
ERR983238 MDR-TB lineage2.2.1.1 None
ERR987707 MDR-TB lineage4.7 None
ERR987757 MDR-TB lineage4.6.1.2 None
ERR9992784 Pre-XDR-TB lineage2.2.2 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR10214505 Sensitive lineage1.2.1.2 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR10315567 Other lineage2.2.1 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR10315465 MDR-TB lineage4.4.1.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR10315551 Sensitive lineage2.2.1 None
SRR10315696 Sensitive lineage4.3.2.1 None
SRR10315579 Other lineage2.2.1.1 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
SRR10315693 RR-TB lineage4.1.2 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR10315751 MDR-TB lineage4.8 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1062860 Sensitive lineage2.2.1.1 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062919 HR-TB lineage2.2.1 None
SRR11342648 MDR-TB lineage4.1.1.3 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR11342643 MDR-TB lineage4.1.1 None
SRR11342634 MDR-TB lineage4.8 None
SRR11349135 XDR-TB lineage4.3.3 None
SRR11342679 Other lineage4.6.3 None
SRR11349137 RR-TB lineage4.4.1.1.1 None
SRR11342685 HR-TB lineage4.4.1.1 None
SRR11342688 Other lineage4.2.2.2 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR11349178 MDR-TB lineage4.4.1.1.1 None
SRR11349159 MDR-TB lineage2.2.2 None
SRR11349172 RR-TB lineage4.3.2.1 None
SRR11349179 MDR-TB lineage2.2.1 None
SRR11349184 MDR-TB lineage2.2.1 None
SRR11349201 MDR-TB lineage4.1.1.3 None
SRR11349187 Pre-XDR-TB lineage4.8.1 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR11349207 RR-TB lineage2.2.1 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1175473 Other lineage4.9 None
SRR11462861 Other La1.8.1 None
SRR1172807 Sensitive lineage4.9 None
SRR1173185 HR-TB lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1173740 Other None
SRR1175472 MDR-TB lineage4 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1172717 Other lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR1173310 MDR-TB None
SRR1173450 RR-TB lineage4.9 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
SRR1173719 HR-TB lineage3 None
SRR1175052 HR-TB lineage4.9 None
SRR1175474 HR-TB lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1175491 MDR-TB lineage4 None
SRR1175506 Sensitive lineage4.9 None
SRR1175496 HR-TB lineage4.9 None
SRR1180252 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181161 Other lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181237 Sensitive lineage2.2 None
SRR1181250 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR1183054 Sensitive lineage4.9 None
SRR1184329 MDR-TB lineage4.9 None
SRR1196478 MDR-TB lineage4.9 None
SRR11972300 MDR-TB lineage2.2.1 None
SRR1183080 RR-TB lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR13199734 Other La1.2 None
SRR11972427 Pre-XDR-TB lineage2.2.1 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR13423641 MDR-TB lineage2.2.1 None
SRR13423629 MDR-TB lineage2.2.1 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR14296220 Other La1.8.1 None
SRR13888750 Other La2 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR15315797 RR-TB lineage2.2.1 None
SRR1792025 Other La1.8.1 None
SRR16089407 Other lineage4.8 None
SRR16156804 RR-TB lineage4.9 None
SRR16156832 RR-TB None
SRR16278274 Other La1.4 None
SRR1735596 RR-TB lineage4.9 None
SRR17856664 Sensitive lineage3 None
SRR1791899 HR-TB La1.8.1 None
SRR1792011 Other La1.8.1 None
SRR1792022 Other La1.8.1 None
SRR15508556 Other lineage4.3.4.1 None
SRR16149133 MDR-TB lineage4.2.2.1 None
SRR16156697 MDR-TB lineage2.2.1 None
SRR16157123 Other lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
SRR1735591 Other lineage4.1.2.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR18002885 Sensitive lineage2.2.1 None
SRR18002888 RR-TB lineage2.2.1 None
SRR18002926 Other lineage2.2.1 None
SRR18002908 Other lineage2.2.1 None
SRR18002929 HR-TB lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002954 Other lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002937 Other lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002961 Other lineage2.2.1 None
SRR18002964 Other lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18003007 MDR-TB lineage4.5 None
SRR18002985 HR-TB lineage2.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18002979 Sensitive lineage2.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR18003038 Other lineage2.2.1 None
SRR18213736 MDR-TB lineage3 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18003052 Other lineage2.2.1.1 None
SRR18149430 Sensitive lineage4.1.1.3 None
SRR18149455 Sensitive lineage4.1.2.1 None
SRR18213721 Other lineage4.8 None
SRR18213726 Other lineage3 None
SRR18213800 Other lineage3.1.2 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR18911000 Sensitive lineage2.2.1 None
SRR18909918 Other lineage2.2.1.1 None
SRR18912070 Sensitive lineage4.8 None
SRR18911555 Other lineage4.1.2.1 None
SRR19158679 Sensitive lineage4.4.1.1 None
SRR18912069 Other lineage4.1.2.1 None
SRR18913742 Sensitive lineage3.1.3 None
SRR18913750 Other lineage2.2.1 None
SRR19303796 Other lineage4.3.3 None
SRR19303810 Sensitive lineage4.8 None
SRR19304094 Other lineage6 None
SRR19303815 Other lineage4.8 None
SRR19303820 RR-TB lineage4.8 None
SRR19304057 Sensitive lineage4.4.1.2 None
SRR19304083 Other lineage4.4.1.1 None
SRR19304095 Other lineage4.1.2.1 None
SRR19304109 Other lineage4.8 None
SRR20969542 Other lineage4.4.2 None
SRR19576436 Sensitive None
SRR20969475 Other lineage1.2.1.2 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR20632814 Sensitive lineage4 None
SRR5709926 MDR-TB lineage2.2.1 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR2101312 MDR-TB lineage2.2.1 None
SRR2101617 Other lineage4.1.1 None
SRR2101689 Other lineage4.3.4.1 None
SRR2101693 Sensitive lineage4.1.2 None
SRR2101786 Sensitive lineage4.4.1.1 None
SRR2101663 Other lineage1.1.3.2 None
SRR2101681 Sensitive lineage4.8 None
SRR21240055 Other lineage4.1.2.1 None
SRR2101803 Sensitive lineage4.3.3 None
SRR21469200 Other La1.7.1 None
SRR21469201 Other La1.7.1 None
SRR21676318 Sensitive lineage2.2.1 None
SRR21469202 Other La1.7.1 None
SRR21595825 Other lineage1.2.1.2.1 None
SRR21658550 Other lineage1.1.1 None
SRR21675637 Sensitive lineage4.3.3 None
SRR21686597 Sensitive lineage4.1.2.1 None
SRR21677886 Sensitive lineage4.9 None
SRR21764250 Other lineage4.9 None
SRR21727728 Sensitive lineage4.4.1.1 None
SRR21722120 Sensitive lineage4.1.2.1 None
SRR22048374 Sensitive lineage4.8 None
SRR22424743 Pre-XDR-TB lineage1.1.2 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR22424851 MDR-TB lineage4.3.3 None
SRR22424787 Sensitive lineage4.9 None
ERR4815121 HR-TB lineage4.6.2.2 None
SRR3675474 Other lineage4.1.1 None
SRR3105736 Other lineage1.2.2.2 None
SRR6046668 Sensitive lineage1.1.2 gb
SRR6046064 Other lineage3 gb
SRR3675491 Other lineage4.7 None
SRR6045056 Other lineage2.2.1 gb
SRR6046447 Sensitive lineage4.8 gb
ERR4814639 HR-TB lineage4 None
SRR3601585 Pre-XDR-TB lineage2.2 None
SRR3619764 Pre-XDR-TB lineage2.2 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR4815705 Sensitive lineage4.8 None
ERR4814690 Sensitive lineage2.2.1 None
ERR4815471 Other lineage4.9 None
SRR3675227 Other lineage4.9 None
ERR4812763 Other lineage2.2.1 None
SRR3675230 RR-TB lineage3 None