EBG00000313339 - n.1097delC
Drug resistance types
146 Sensitive
72 RR-TB
53 HR-TB
101 MDR-TB
41 Pre-XDR-TB
3 XDR-TB
332 Other
lineage Counts
| lineage | Count |
|---|---|
| 17 | |
| lineage4.9 | 153 |
| lineage2.2.1 | 112 |
| lineage4.3.2.1 | 9 |
| La1.8.1 | 18 |
| lineage5.1.1 | 2 |
| lineage4.3.3 | 18 |
| lineage4.3.4.2 | 1 |
| lineage4.6.2.2 | 5 |
| lineage4.8 | 38 |
| lineage4.1.1.3 | 13 |
| lineage2.2.1.1 | 6 |
| lineage4.7 | 11 |
| lineage4.1.1 | 11 |
| lineage4.1.2 | 6 |
| lineage4.6.1.1 | 1 |
| lineage3 | 49 |
| lineage4.2.1 | 8 |
| lineage4.4.2 | 2 |
| lineage4.1.2.1 | 32 |
| lineage4.8.1 | 2 |
| lineage4.3.4.2.1 | 5 |
| La1.2 | 4 |
| lineage1.1.1.1 | 2 |
| lineage4.2.2 | 2 |
| lineage4 | 33 |
| lineage3.1.2.2 | 6 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.3.4.1 | 8 |
| lineage4.3.2 | 4 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.3 | 3 |
| lineage4.3.4 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.1.4 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.7.X-unk4 | 1 |
| lineage6 | 4 |
| lineage4.9;La1.8 | 1 |
| La1.3 | 12 |
| lineage4.9;La1.3 | 2 |
| lineage2.2 | 5 |
| lineage2.2.2 | 7 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage2.1 | 1 |
| lineage4.1.1.2 | 2 |
| lineage4.2.2.2 | 9 |
| lineage3.1.1 | 12 |
| lineage4.6 | 2 |
| lineage1.2.2.2 | 4 |
| lineage3.1.3 | 3 |
| lineage4.3.1.1 | 5 |
| lineage1.1.1 | 3 |
| lineage4.8.2 | 1 |
| lineage4.6.1.2 | 6 |
| lineage4.4.1.1 | 19 |
| lineage1.2.1.2 | 2 |
| lineage4.4.1.1.1 | 5 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.6.3 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 1 |
| La2 | 1 |
| lineage4.2.2.1 | 1 |
| La1.4 | 1 |
| lineage4.4 | 3 |
| lineage4.5 | 1 |
| lineage3.1.2 | 5 |
| lineage1.1.3.2 | 2 |
| lineage1.2.1.2.1 | 2 |
| La1.7.1 | 3 |
| lineage1.1.2 | 7 |
| lineage4.4.1 | 1 |
| lineage1.2.1.1 | 2 |
| lineage3.1.2.1 | 2 |
| lineage3.1 | 2 |
| lineage4;lineage2 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage4;lineage3 | 1 |
| lineage6.1.3 | 1 |
| lineage1.1.3.1 | 2 |
| lineage1.1.3.3 | 1 |
| lineage4.6.5 | 1 |
| lineage2.2.1;lineage1.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 748 |
Geographic prevalence
Country level data for this variant is available for 15 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6982405 | Sensitive | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | ERR5087846 | Other | La1.8.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR5311080 | Other | La1.8.1 | None | ERR5162118 | Other | La1.8.1 | None | ERR5162133 | Other | La1.8.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR6982558 | Other | lineage4.3.4.2 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR7131068 | Other | lineage4.8 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7131098 | MDR-TB | lineage4.3.3 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR7496471 | Sensitive | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR9971336 | XDR-TB | lineage4.3.3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7585435 | Other | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR9971032 | RR-TB | lineage2.2.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971144 | RR-TB | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR8902558 | Other | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | SRR7851312 | Other | La1.2 | None | DRR184982 | RR-TB | lineage2.2.1 | None | DRR185000 | Other | lineage1.1.1.1 | None | DRR185048 | Other | lineage2.2.1 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR067712 | HR-TB | lineage4 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR1063855 | Other | lineage4 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR10762318 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796615 | Other | lineage4 | None | ERR10796581 | HR-TB | lineage4.1.2 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796599 | Other | lineage4 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796634 | Other | lineage4 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796627 | Other | lineage4 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR10796635 | Other | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283053 | Other | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR3439265 | Other | lineage4.9 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3468561 | HR-TB | lineage4.9 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR4188253 | Other | La1.8.1 | None | ERR4188010 | Other | La1.8.1 | None | ERR3806588 | Other | lineage6 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | ERR4188255 | Other | lineage4.9;La1.8 | None | ERR4627379 | Other | La1.8.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4627392 | Other | La1.8.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769423 | Other | La1.3 | None | ERR4769408 | Other | La1.3 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769436 | Other | La1.3 | None | ERR4769495 | Other | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769503 | Other | La1.2 | None | ERR4769514 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769546 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769551 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4800197 | HR-TB | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR5865338 | MDR-TB | lineage2.2 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5979407 | Other | lineage3 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR5908124 | Other | lineage4.8 | None | ERR6197022 | Other | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197036 | Other | lineage4 | None | ERR6197034 | Other | lineage4.9 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR736837 | Other | lineage4.9 | None | ERR6866186 | Sensitive | lineage4.8 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR8025347 | Sensitive | lineage4.9 | None | SRR11662417 | Pre-XDR-TB | lineage2.1 | None | ERR9117699 | Other | lineage4.1.2.1 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR9117676 | Other | lineage4.2.2.2 | None | ERR9117695 | Other | lineage4.1.2.1 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117725 | Other | lineage4.1.1 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117763 | HR-TB | lineage3 | None | ERR9117788 | Other | lineage3 | None | ERR9117759 | Other | lineage3 | None | ERR9117781 | Other | lineage3.1.3 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9117789 | Sensitive | lineage4.8 | None | ERR9117806 | Other | lineage4.8 | None | ERR9117823 | Other | lineage1.1.1 | None | ERR9117822 | Sensitive | lineage4.1.2.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9119120 | Other | lineage4.8 | None | ERR9117841 | Other | lineage4.8.2 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR9811805 | MDR-TB | lineage4.8 | None | ERR9786613 | Sensitive | lineage4.1.2.1 | None | ERR9787033 | Sensitive | lineage6 | None | ERR9787336 | Other | lineage6 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR987757 | MDR-TB | lineage4.6.1.2 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11342679 | Other | lineage4.6.3 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR11349184 | MDR-TB | lineage2.2.1 | None | SRR11349137 | RR-TB | lineage4.4.1.1.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR11349159 | MDR-TB | lineage2.2.2 | None | SRR11349178 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349179 | MDR-TB | lineage2.2.1 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173740 | Other | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173310 | MDR-TB | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181250 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972300 | MDR-TB | lineage2.2.1 | None | SRR11972427 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR13199734 | Other | La1.2 | None | SRR13423641 | MDR-TB | lineage2.2.1 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR13888750 | Other | La2 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR14296220 | Other | La1.8.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR16089407 | Other | lineage4.8 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16149133 | MDR-TB | lineage4.2.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR16157123 | Other | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1735591 | Other | lineage4.1.2.1 | None | SRR17856664 | Sensitive | lineage3 | None | SRR1792011 | Other | La1.8.1 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002885 | Sensitive | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002926 | Other | lineage2.2.1 | None | SRR18002929 | HR-TB | lineage2.2.1 | None | SRR18002888 | RR-TB | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002979 | Sensitive | lineage2.2.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18149430 | Sensitive | lineage4.1.1.3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003052 | Other | lineage2.2.1.1 | None | SRR18213800 | Other | lineage3.1.2 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18213726 | Other | lineage3 | None | SRR19303815 | Other | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18912070 | Sensitive | lineage4.8 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19158679 | Sensitive | lineage4.4.1.1 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19303810 | Sensitive | lineage4.8 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18911555 | Other | lineage4.1.2.1 | None | SRR18912069 | Other | lineage4.1.2.1 | None | SRR18913750 | Other | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19304083 | Other | lineage4.4.1.1 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR19304109 | Other | lineage4.8 | None | SRR19304094 | Other | lineage6 | None | SRR19576436 | Sensitive | None | SRR19304095 | Other | lineage4.1.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR2101689 | Other | lineage4.3.4.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21595825 | Other | lineage1.2.1.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR21764250 | Other | lineage4.9 | None | SRR21727728 | Sensitive | lineage4.4.1.1 | None | SRR22048374 | Sensitive | lineage4.8 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424743 | Pre-XDR-TB | lineage1.1.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR6046064 | Other | lineage3 | gb | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR3675474 | Other | lineage4.1.1 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR3675491 | Other | lineage4.7 | None | SRR6045056 | Other | lineage2.2.1 | gb | SRR3105736 | Other | lineage1.2.2.2 | None | SRR6046447 | Sensitive | lineage4.8 | gb | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815705 | Sensitive | lineage4.8 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4814690 | Sensitive | lineage2.2.1 | None | SRR3675227 | Other | lineage4.9 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4812763 | Other | lineage2.2.1 | None | ERR1750908 | Sensitive | lineage4 | None | SRR3675234 | Other | None | ERR2179857 | RR-TB | lineage4 | None | ERR1750938 | Other | lineage4.4.1 | None | SRR3675256 | Other | lineage4.7 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4815075 | MDR-TB | lineage3 | None | ERR4814976 | Other | lineage4.9 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4815079 | RR-TB | lineage3 | None | SRR3675509 | Other | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | SRR3675525 | Other | lineage4.8 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2027250 | Other | lineage3.1.2 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027230 | Other | lineage4.2.2.2 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816231 | Other | lineage4 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4817069 | RR-TB | None | ERR4816322 | Other | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | ERR4816417 | Other | lineage4.9 | None | ERR4817109 | Other | lineage3 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816734 | Sensitive | lineage4.9 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4817434 | Other | lineage3 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4816852 | Other | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR228175 | Sensitive | lineage3 | None | ERR2510736 | Other | lineage4.1.2.1 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR2432997 | Other | lineage4.8 | None | ERR3275190 | Other | lineage3 | nl | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4818831 | Other | lineage3 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR2513259 | Other | lineage3 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR3275941 | RR-TB | lineage4.3 | nl | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818952 | Other | lineage3 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007180 | Other | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4817556 | Sensitive | lineage4.2.2.2 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5007186 | Other | lineage4.6 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR1023509 | Other | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819910 | Other | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR2101651 | Sensitive | lineage4.3.2.1 | None | SRR6153166 | Other | lineage1.2.1.2.1 | ca | ERR4819933 | Other | lineage4.9 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR2515230 | Sensitive | lineage4.8 | None | ERR4820193 | Other | lineage3 | None | ERR4820130 | Other | lineage3 | None | SRR6045422 | Other | lineage4.3.1.1 | None | ERR2446509 | Other | lineage3 | nl | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4821057 | HR-TB | lineage4 | None | SRR6045485 | Other | lineage4.9 | None | SRR6046089 | Other | lineage4.1.2.1 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6045445 | Other | lineage4.3.1.1 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822217 | Sensitive | lineage4.3.4.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6046113 | Other | lineage4.1.1.3 | None | SRR6045599 | Other | lineage4.8 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045614 | Other | lineage4.8 | None | SRR6046135 | Other | lineage4.1.2.1 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR6045705 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045743 | Other | lineage3 | None | SRR5818572 | Sensitive | lineage4.2.2.2 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045778 | Other | lineage3.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR5818622 | Sensitive | lineage4.2.2.2 | None | SRR5818624 | Sensitive | lineage3 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR5818690 | Other | lineage4.2.2.2 | None | SRR6045894 | Other | lineage4.8 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6044787 | Other | lineage4.4 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6044904 | Other | lineage3 | None | SRR6044817 | Other | lineage3 | None | SRR6044872 | Sensitive | lineage3.1.2.1 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045928 | Other | lineage4.9 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044936 | Other | lineage4 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6044993 | Other | lineage3 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6045024 | Other | lineage4.1.1.2 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6045158 | Other | lineage4.9 | None | SRR6046020 | Other | lineage3 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6045178 | Other | lineage3 | None | SRR6046189 | Other | lineage4.8 | None | SRR6045175 | Other | lineage3.1.2.2 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045248 | Other | lineage3.1.1 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR6045295 | Other | lineage4.7 | None | SRR6045321 | Other | lineage1.1.3.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6045289 | Other | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046246 | Other | lineage3 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046281 | Other | lineage4.9 | None | SRR6046291 | Other | lineage3 | None | SRR6046376 | Other | lineage3 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046385 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR2517074 | Pre-XDR-TB | lineage3 | gb | ERR4830887 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830888 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046442 | Other | lineage3 | None | SRR6046607 | Other | lineage3 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046641 | Other | lineage4.8 | None | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR6046824 | HR-TB | None | SRR6046790 | Other | lineage4.7 | None | SRR6046729 | Other | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046815 | Other | lineage3 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR2843513 | Other | lineage2.2.1;lineage1.1.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046891 | Other | lineage4.7 | None | SRR6153150 | Other | lineage3.1.1 | None | SRR6367397 | Other | lineage4.1.2.1 | None | ERR502472 | Other | lineage4.6.2.2 | None | ERR3077969 | Other | La1.3 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502482 | Sensitive | lineage4.9 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR4972588 | MDR-TB | lineage4.3.2 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502497 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6856087 | Sensitive | lineage4 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6896340 | HR-TB | lineage4.4.1.1 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982430 | Other | lineage4.3.4.2.1 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982190 | Sensitive | lineage4.3.3 | None | SRR6982196 | Sensitive | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6896545 | Other | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6981981 | Other | lineage4.3.3 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6981983 | Sensitive | lineage3.1.1 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6982014 | Other | lineage4.1.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR6855917 | Other | lineage4.8 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982394 | Sensitive | lineage4.3.2.1 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb |
|---|
