Rv0668 - c.1233C>T
Drug resistance types
72 Sensitive
61 RR-TB
43 HR-TB
21 MDR-TB
18 Pre-XDR-TB
0 XDR-TB
106 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 52 |
| lineage4.2.2.2 | 1 |
| 34 | |
| lineage1.2.2 | 1 |
| lineage4.2.1 | 3 |
| lineage4.1.2 | 5 |
| lineage4.9 | 52 |
| lineage2.2 | 3 |
| lineage1.1.3.1 | 3 |
| lineage2.2.1 | 20 |
| lineage4.3.4.2 | 3 |
| lineage3 | 25 |
| lineage4.8 | 12 |
| lineage1.2.1.1 | 2 |
| lineage4.1 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.1.2.1 | 12 |
| lineage3.1.1 | 4 |
| lineage5 | 1 |
| lineage3.1 | 1 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage4.1.1 | 5 |
| lineage4.3.3 | 8 |
| lineage4.6.1.2 | 1 |
| lineage4.7 | 4 |
| lineage4.6.2.2 | 2 |
| lineage4.5 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1;lineage1 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.6.3 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage2.2.1.1 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.4.1.1 | 5 |
| lineage1.2.2.2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.1.3;lineage1.1.2 | 1 |
| lineage4.1.1.3 | 3 |
| lineage2.1 | 1 |
| lineage3.1.2.2 | 2 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage1.1.2 | 2 |
| lineage4.3.1 | 1 |
| lineage4.6.5 | 1 |
| La1.8.1 | 4 |
| lineage4.4.1.1.1 | 2 |
| La1.7.X-unk4 | 1 |
| lineage5.1.2 | 1 |
| La1.3 | 4 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 2 |
| lineage2.2.2 | 2 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.3 | 1 |
| lineage6 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| La2 | 1 |
| La1.7.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 321 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4814312 | Other | lineage4 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815394 | RR-TB | lineage4.2.1 | None | ERR4814496 | RR-TB | lineage4.1.2 | None | ERR4815777 | Other | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4814617 | Other | lineage1.1.3.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4814763 | Other | lineage2.2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR1664656 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675230 | RR-TB | lineage3 | None | ERR1750907 | RR-TB | None | ERR4814748 | Other | lineage4.8 | None | ERR4814714 | Other | lineage3 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR181824 | HR-TB | lineage4 | None | ERR192070 | Other | None | ERR4815528 | Other | lineage4.8 | None | ERR176651 | HR-TB | None | ERR4814976 | Other | lineage4.9 | None | ERR181887 | HR-TB | None | ERR4814841 | Other | lineage4.1 | None | SRR3675265 | Other | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4817047 | Other | lineage4.2.2.1 | gb | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4815909 | Other | lineage4.8 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4816967 | RR-TB | lineage5 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4816183 | Other | None | ERR4816184 | Other | lineage4.1.2.1 | None | SRR3732584 | MDR-TB | lineage4.3.3 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | ERR4816227 | RR-TB | lineage3 | None | ERR4817060 | RR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | ERR4817131 | Pre-XDR-TB | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816631 | Other | lineage2.2.1 | None | ERR4816604 | RR-TB | lineage4.1.2 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816756 | RR-TB | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4816852 | Other | lineage4.9 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR2512986 | Other | lineage3 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4819068 | Sensitive | lineage4.1;lineage1 | None | ERR2510796 | HR-TB | lineage4.3.4.2 | it | ERR4817874 | Other | lineage3 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4817998 | Other | lineage3 | None | ERR4818763 | Other | lineage3 | gb | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818065 | Other | lineage4.1.2.1 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818498 | Other | lineage3.1.2.1 | gb | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818393 | RR-TB | lineage3 | None | ERR2513259 | Other | lineage3 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818958 | Other | lineage4.1.1 | gb | ERR4818536 | Other | lineage4.9 | None | ERR2509886 | RR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4817552 | Sensitive | lineage2.2.1.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4820266 | RR-TB | lineage3 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4819462 | Other | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | ERR4820324 | Other | lineage4 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR4819456 | Other | lineage4.8 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4820746 | RR-TB | lineage3 | None | ERR4819515 | HR-TB | lineage4.2.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4819615 | Other | lineage4.3.4.2.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR2514655 | Sensitive | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR2514550 | MDR-TB | lineage3 | gb | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR1023509 | Other | None | ERR2514854 | Other | lineage4.3.3 | None | ERR2514834 | Other | lineage4.7 | None | ERR4819933 | Other | lineage4.9 | None | ERR4820833 | HR-TB | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR2515032 | Other | lineage3 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820184 | MDR-TB | lineage3 | gb | ERR4821057 | HR-TB | lineage4 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | SRR6045503 | HR-TB | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4822104 | RR-TB | lineage3 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821167 | Other | lineage4.8 | gb | ERR4821214 | RR-TB | None | ERR4821409 | Other | lineage4.8 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821915 | RR-TB | lineage4.9 | None | ERR4822085 | Other | lineage4.8 | gb | ERR4821679 | Other | lineage4.3.3 | None | ERR4822101 | Sensitive | lineage4.1.3;lineage1.1.2 | None | ERR4822169 | Other | lineage4.1.1.3 | gb | ERR4821572 | Other | lineage2.1 | None | ERR4822222 | Other | lineage3.1.2.2 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | ERR4821746 | Other | lineage4.4.1.1 | gb | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045928 | Other | lineage4.9 | None | SRR6044936 | Other | lineage4 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6046376 | Other | lineage3 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR4829333 | RR-TB | lineage4 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046729 | Other | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6832116 | HR-TB | lineage4.3.3 | None | SRR6046897 | Sensitive | lineage4 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR036207 | Other | lineage4.9 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323045 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283014 | HR-TB | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283025 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283028 | Other | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283047 | HR-TB | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3439265 | Other | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349265 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797064 | Sensitive | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4769408 | Other | La1.3 | None | ERR4178226 | Sensitive | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4769418 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769436 | Other | La1.3 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4798431 | HR-TB | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6359069 | Other | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359045 | HR-TB | None | ERR5908229 | Sensitive | lineage4.3.3 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR736837 | Other | lineage4.9 | None | ERR736848 | HR-TB | None | ERR9119101 | Sensitive | lineage4.3.3 | None | ERR9119669 | HR-TB | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR9787336 | Other | lineage6 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR16157123 | Other | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21469202 | Other | La1.7.1 | None | SRR21469201 | Other | La1.7.1 | None |
|---|
