SRR9971112
|
Other
|
lineage2.2.1
|
None
|
SRR9971026
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
ERR3283057
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR10315551
|
Sensitive
|
lineage2.2.1
|
None
|
ERR867525
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR867573
|
Other
|
lineage4.9
|
None
|
ERR3797081
|
Sensitive
|
lineage4.9
|
None
|
SRR11342664
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR1735598
|
RR-TB
|
lineage4.9
|
None
|
ERR4817060
|
Other
|
|
None
|
ERR6359045
|
Other
|
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
|
None
|
ERR4818065
|
Other
|
lineage4.1.2.1
|
None
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
ERR176778
|
HR-TB
|
lineage4.9
|
None
|
ERR363446
|
Sensitive
|
lineage4.9
|
None
|
ERR3797087
|
Sensitive
|
lineage4.9
|
None
|
ERR926156
|
Sensitive
|
lineage4.9
|
None
|
ERR3445502
|
Sensitive
|
lineage4.9;lineage7
|
None
|
ERR4820019
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR926165
|
Sensitive
|
lineage4.9
|
None
|
SRR11349145
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR6045503
|
Sensitive
|
lineage4.9
|
None
|
ERR4816745
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4817915
|
Other
|
lineage4.9
|
None
|
ERR363500
|
Sensitive
|
lineage4.9
|
None
|
SRR18002947
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR926155
|
Sensitive
|
lineage4.9
|
None
|
ERR926157
|
Sensitive
|
lineage4.9
|
None
|
SRR1049677
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR11342662
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR4820151
|
Other
|
lineage4.8
|
None
|
ERR4769444
|
HR-TB
|
lineage4.9
|
None
|
ERR2513724
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR4798431
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
ERR2027209
|
MDR-TB
|
lineage1.2.1.1
|
None
|
SRR18003004
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR4819357
|
Sensitive
|
lineage4.9
|
None
|
SRR10315556
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4816610
|
Other
|
lineage4.3.3
|
None
|
ERR4809333
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR036207
|
Other
|
lineage4.3;lineage4.9
|
None
|
SRR1140574
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR12708399
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR369151
|
Other
|
lineage4.9
|
None
|
SRR12708409
|
HR-TB
|
lineage4.3.3
|
None
|
SRR1735596
|
RR-TB
|
lineage4.9
|
None
|
SRR5007167
|
RR-TB
|
lineage4.1.1.3.1
|
None
|
ERR9119669
|
HR-TB
|
lineage4.9
|
None
|
SRR12708413
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR6045957
|
Other
|
lineage4.9
|
None
|
ERR4821408
|
Sensitive
|
lineage4.1.2
|
None
|
SRR3675292
|
Sensitive
|
lineage4.9
|
None
|
ERR363506
|
Sensitive
|
lineage4.9
|
None
|
ERR363490
|
Sensitive
|
lineage4.9
|
None
|
SRR11342642
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR9786444
|
Sensitive
|
lineage4.8
|
None
|
ERR4816964
|
Sensitive
|
lineage4.9
|
None
|
ERR192070
|
Sensitive
|
lineage4.9
|
None
|
SRR11342686
|
MDR-TB
|
lineage4.8
|
None
|
SRR11342651
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR6865502
|
Sensitive
|
lineage4
|
None
|
ERR867554
|
Other
|
lineage4.3.4.1
|
None
|
ERR4819706
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4816852
|
Other
|
lineage4.9
|
None
|
ERR4816967
|
Other
|
lineage5
|
None
|
ERR363449
|
Sensitive
|
lineage4.9
|
None
|
ERR363474
|
Sensitive
|
lineage4.9
|
None
|
ERR3283047
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR16157123
|
Other
|
lineage4.9
|
None
|
ERR4819933
|
Sensitive
|
lineage4.9
|
None
|
ERR926161
|
Sensitive
|
lineage4.9
|
None
|
ERR349299
|
Other
|
lineage4.9
|
None
|
SRR18002903
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR12708392
|
Other
|
lineage2.2.1
|
None
|
ERR1063862
|
HR-TB
|
lineage4.9
|
None
|
SRR3675260
|
Sensitive
|
lineage4.9
|
None
|
ERR867541
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR6046376
|
Other
|
lineage3
|
None
|
ERR349298
|
Sensitive
|
lineage4.9
|
None
|
ERR212138
|
HR-TB
|
lineage4.9
|
None
|
ERR5311077
|
Other
|
La1.8.1
|
None
|
ERR3797064
|
Other
|
La3;lineage4.9
|
None
|
ERR3468488
|
Other
|
La1.8.1
|
None
|
ERR4816100
|
Sensitive
|
lineage1.1.2;lineage4.1.2.1;lineage4.1.3
|
None
|
ERR4820410
|
RR-TB
|
lineage3.1.1
|
None
|
SRR6045050
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR11342634
|
MDR-TB
|
lineage4.8
|
None
|
ERR363447
|
Other
|
lineage4.9
|
None
|
SRR9971113
|
Other
|
lineage2.2.1
|
None
|
SRR6045706
|
Sensitive
|
lineage4.9
|
None
|
ERR3797065
|
RR-TB
|
lineage4.9
|
None
|
ERR373947
|
Other
|
lineage4.9
|
None
|
ERR2514351
|
Sensitive
|
lineage3
|
gb
|
ERR373946
|
Sensitive
|
lineage4.9
|
None
|
ERR4821572
|
Sensitive
|
lineage2.1
|
None
|
SRR20632814
|
Sensitive
|
lineage4.9
|
None
|
ERR369159
|
Sensitive
|
lineage4.9
|
None
|
ERR4769418
|
Other
|
La1.2
|
None
|
SRR11342671
|
RR-TB
|
lineage4.1.3
|
None
|
SRR5007170
|
Other
|
lineage4.9
|
None
|
SRR9971372
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR12708396
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR4769530
|
RR-TB
|
lineage4.9
|
None
|
ERR1063858
|
HR-TB
|
lineage4.9
|
None
|
ERR4815910
|
Other
|
lineage4.1.2.1
|
None
|
ERR369162
|
Other
|
lineage4.9
|
None
|
ERR3797029
|
Other
|
lineage4.9
|
None
|
SRR5007204
|
Other
|
lineage4.1.2.1
|
None
|
ERR4818710
|
Sensitive
|
lineage4.9
|
None
|
ERR4816113
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4808964
|
RR-TB
|
lineage2.2.1
|
None
|
ERR363453
|
Sensitive
|
lineage4.9
|
None
|
ERR4769439
|
HR-TB
|
lineage4.9
|
None
|
ERR4821176
|
Other
|
lineage2.2.1
|
None
|
ERR4821143
|
Other
|
lineage4.9
|
None
|
ERR3283026
|
HR-TB
|
lineage4.2;lineage4.6.3;lineage4.9.1
|
None
|
ERR9787336
|
RR-TB
|
lineage6.1.3
|
None
|
ERR867524
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR363498
|
Sensitive
|
lineage4.9
|
None
|
SRR6046839
|
Other
|
lineage4.9
|
None
|
ERR4818393
|
RR-TB
|
lineage3;lineage4
|
None
|
SRR7069800
|
Other
|
lineage3.1.2.1
|
None
|
ERR4178309
|
Other
|
lineage4.1.2.1
|
None
|
ERR4872322
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4820817
|
Other
|
lineage4.1.2.1
|
None
|
ERR736837
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR736848
|
Other
|
lineage4.9
|
None
|
ERR2512986
|
Other
|
lineage3
|
None
|
SRR12708418
|
HR-TB
|
lineage2.2.1
|
None
|
SRR14801759
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR3601585
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR363421
|
Sensitive
|
lineage4.9
|
None
|
ERR369161
|
Sensitive
|
lineage4.9
|
None
|
ERR987707
|
MDR-TB
|
lineage4.7
|
None
|
ERR4769508
|
RR-TB
|
lineage4.9
|
None
|
ERR867567
|
RR-TB
|
lineage3
|
None
|
ERR926160
|
Sensitive
|
lineage4.9
|
None
|
ERR181887
|
Other
|
lineage4.9
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
ERR363437
|
Sensitive
|
lineage4.9
|
None
|
ERR349265
|
Other
|
lineage4.9
|
None
|
ERR3283014
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR6046897
|
Sensitive
|
lineage4.9
|
None
|
ERR3797063
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR4178226
|
Sensitive
|
lineage4
|
None
|
SRR12708370
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR6865513
|
Other
|
lineage4.1.2.1
|
None
|
SRR7496471
|
Sensitive
|
lineage4
|
None
|
SRR3675209
|
Sensitive
|
lineage4.9
|
None
|
ERR3283011
|
Other
|
La3;lineage4.9
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
SRR11342636
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR867523
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR926163
|
Other
|
lineage4.9
|
None
|
ERR176779
|
HR-TB
|
lineage4.9
|
None
|
ERR4769436
|
Other
|
La1.3
|
None
|
SRR5341267
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4829039
|
RR-TB
|
lineage4.3.1
|
None
|
ERR4819528
|
RR-TB
|
lineage3
|
None
|
ERR2446154
|
Sensitive
|
lineage4.4.1.1
|
nl
|
ERR369160
|
Sensitive
|
lineage4.9
|
None
|
ERR363445
|
Other
|
lineage4.9
|
None
|
ERR1023509
|
Other
|
lineage4.9
|
None
|
ERR3445501
|
HR-TB
|
La1.7.1;La1.7.X-unk4;lineage7
|
None
|
ERR3275615
|
Sensitive
|
lineage4.4.1.1
|
nl
|
ERR4821679
|
Other
|
lineage4.3.3
|
None
|
SRR6046259
|
Sensitive
|
lineage4.9
|
None
|
SRR8758877
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR212125
|
HR-TB
|
lineage4.9
|
None
|
SRR29017081
|
Sensitive
|
lineage4.9
|
None
|
SRR21469202
|
Other
|
La1.7.1
|
None
|
SRR1915487
|
Other
|
La1.2.BCG
|
None
|
ERR9786528
|
Sensitive
|
lineage4.6.2.2
|
None
|
SRR12708419
|
Other
|
lineage4.3.3
|
None
|
ERR6359070
|
Sensitive
|
lineage4.9
|
None
|
ERR3283025
|
MDR-TB
|
La1.7;lineage4.9
|
None
|
SRR9971046
|
MDR-TB
|
lineage4.8
|
None
|
ERR4769442
|
Sensitive
|
lineage4.9
|
None
|
ERR181824
|
HR-TB
|
lineage4.9
|
None
|
ERR349264
|
Sensitive
|
lineage4.9
|
None
|
ERR369156
|
Sensitive
|
lineage4.9
|
None
|
ERR3797079
|
Sensitive
|
lineage4.9
|
None
|
ERR4821007
|
Other
|
lineage1.2.2.2
|
None
|
ERR4819462
|
Sensitive
|
lineage4.9
|
None
|
SRR11342673
|
RR-TB
|
lineage4.3.4.2
|
None
|
ERR4769550
|
Sensitive
|
La1;lineage4.9
|
None
|
ERR4821747
|
Sensitive
|
lineage4.9
|
None
|
SRR7496523
|
Other
|
lineage4.7
|
None
|
ERR5311097
|
Sensitive
|
lineage4.2;lineage4.6.3;lineage4.9
|
None
|
ERR867570
|
RR-TB
|
lineage4.9
|
None
|
ERR4815471
|
Sensitive
|
lineage4.9
|
None
|
ERR4816322
|
Other
|
lineage4.9
|
None
|
ERR4821214
|
Other
|
lineage1.2.1.2.1
|
None
|
ERR176651
|
Other
|
lineage4.9
|
None
|
SRR6044936
|
Other
|
lineage4.6
|
None
|
SRR6046611
|
Sensitive
|
lineage4.9
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
SRR5007161
|
RR-TB
|
lineage4.1.1.3.1;lineage4.9
|
None
|
SRR12708414
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4810624
|
MDR-TB
|
lineage2.2
|
None
|
SRR11342658
|
RR-TB
|
lineage4.1.2
|
None
|
SRR1049676
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
ERR4819772
|
Other
|
lineage1.1.3.1
|
None
|
ERR4819948
|
Other
|
lineage4.4.1.1
|
None
|
ERR3283028
|
Other
|
La3;lineage4
|
None
|
SRR1172807
|
Sensitive
|
lineage4.9
|
None
|
ERR4816310
|
HR-TB
|
lineage4.6.1.2
|
None
|
SRR11342649
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR369163
|
Sensitive
|
lineage4.9
|
None
|
ERR369158
|
Other
|
lineage4.9
|
None
|
SRR3619764
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4819305
|
Sensitive
|
lineage4.9
|
None
|
SRR3675265
|
Other
|
lineage4
|
None
|
SRR6045191
|
Sensitive
|
lineage4.9
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
SRR6046863
|
Sensitive
|
lineage1.1.2
|
None
|
ERR3797048
|
Other
|
La3;lineage4.9
|
None
|
SRR11342687
|
RR-TB
|
lineage4.2.2.2
|
None
|
ERR2513259
|
Other
|
lineage3
|
None
|
ERR926162
|
Sensitive
|
lineage4.9
|
None
|
SRR12708415
|
HR-TB
|
lineage2.2.1
|
None
|
ERR349300
|
Sensitive
|
lineage4.9
|
None
|
ERR363479
|
Sensitive
|
lineage4.9
|
None
|
SRR12708407
|
HR-TB
|
lineage4.3.2.1
|
None
|
ERR3283031
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR4769433
|
RR-TB
|
lineage4.9
|
None
|
ERR323045
|
HR-TB
|
lineage1;lineage4.9
|
None
|
ERR363426
|
Sensitive
|
lineage4.9
|
None
|
ERR970449
|
RR-TB
|
lineage4.1.1.3
|
None
|
SRR11342660
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4817131
|
Other
|
lineage3.1.3;lineage4.9
|
None
|
SRR13888750
|
Other
|
La2
|
None
|
ERR926158
|
Sensitive
|
lineage4.9
|
None
|
SRR21469201
|
Other
|
La1.7.1
|
None
|
ERR4816470
|
HR-TB
|
lineage3
|
None
|
ERR3445503
|
Other
|
La1.7.1;La1.7.X-unk4
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
ERR6359069
|
Sensitive
|
lineage4.9
|
None
|
ERR4811035
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.5
|
None
|
ERR3797085
|
Other
|
lineage4.9
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR12708411
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR6046802
|
Other
|
lineage4.9
|
None
|
ERR1063859
|
HR-TB
|
La1.7.1;lineage4.9
|
None
|
ERR926159
|
Sensitive
|
lineage4.9
|
None
|
ERR363499
|
Sensitive
|
lineage4.9
|
None
|
SRR11342643
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4829333
|
Other
|
lineage4
|
None
|
SRR18002881
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR926154
|
Sensitive
|
lineage4.9
|
None
|
ERR6358951
|
Sensitive
|
lineage4.9
|
None
|
ERR971389
|
Sensitive
|
lineage4.9
|
None
|
ERR3290633
|
Other
|
lineage4.2;lineage4.6.3;lineage4.9.1
|
None
|
ERR1063849
|
HR-TB
|
lineage4.9
|
None
|
ERR926164
|
Other
|
lineage4.9
|
None
|
ERR363502
|
Other
|
lineage4.9
|
None
|
ERR4821746
|
Sensitive
|
lineage4.4.1.1
|
gb
|
SRR11342696
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR3445487
|
Other
|
La1.7.X-unk4
|
None
|
ERR4814748
|
Other
|
lineage4.8
|
None
|
ERR3797086
|
Sensitive
|
lineage4.9
|
None
|
SRR11342647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4819011
|
Other
|
lineage3.1.2.1
|
None
|
SRR9971080
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4820833
|
Other
|
lineage3;lineage4.9
|
None
|
SRR1915485
|
Other
|
La1.2.BCG
|
None
|
ERR349266
|
Sensitive
|
lineage4.9
|
None
|
ERR369157
|
Sensitive
|
lineage4.9
|
None
|
ERR3797060
|
Other
|
La1.8.1
|
None
|