EBG00000313339 - n.702C>G
Drug resistance types
19 Sensitive
31 RR-TB
32 HR-TB
40 MDR-TB
21 Pre-XDR-TB
0 XDR-TB
70 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 59 |
| lineage4.8 | 6 |
| lineage2.2 | 2 |
| lineage2.2.1 | 28 |
| lineage4 | 17 |
| lineage3 | 16 |
| lineage4.1.2.1 | 5 |
| lineage4.6.2.2 | 2 |
| lineage1.2.1.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.5 | 2 |
| lineage4;lineage2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.6.1.2 | 5 |
| lineage3.1.2.1 | 1 |
| lineage4.3.3 | 2 |
| 8 | |
| lineage4.4.1.1 | 2 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.3.1.1 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.1 | 1 |
| lineage4.1.2;lineage3.1 | 1 |
| La1.8.1 | 6 |
| lineage4.7 | 2 |
| lineage4.2.1.1 | 1 |
| lineage5.1.1 | 2 |
| lineage1.2.2.1 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage2.2.2 | 3 |
| lineage4.2.2 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.7.X-unk4 | 1 |
| lineage6 | 2 |
| La1.3 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.4.2 | 3 |
| lineage4.3.4.1 | 1 |
| La1.7.1 | 3 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 213 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675552 | RR-TB | lineage4.9 | None | ERR4814362 | Other | lineage4.8 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815471 | Other | lineage4.9 | None | ERR4815079 | RR-TB | lineage3 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR4816470 | Other | lineage3 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4817667 | HR-TB | lineage4.8 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR4818904 | Other | lineage4.8 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819462 | Other | lineage4 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR1023509 | Other | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820026 | Other | lineage3 | None | ERR4819933 | Other | lineage4.9 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | ERR4820833 | HR-TB | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4820030 | Other | lineage4.9 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6046141 | Other | lineage4.9 | None | ERR2851359 | Other | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044817 | Other | lineage3 | None | SRR6046385 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4830778 | Pre-XDR-TB | lineage4.5 | None | ERR4830856 | MDR-TB | lineage4.4.1.1 | None | ERR4829623 | Sensitive | lineage4.8 | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | SRR6046852 | MDR-TB | lineage3 | None | ERR323037 | HR-TB | lineage4 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | ERR5087486 | Other | La1.8.1 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6896545 | Other | lineage4.9 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR6982530 | Other | lineage1.2.2.1 | None | SRR7131296 | Other | lineage4.3.3 | None | DRR184629 | Other | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR10796571 | Other | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR036207 | Other | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR3806588 | Other | lineage6 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | ERR9117740 | Other | lineage3.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR9117788 | Other | lineage3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9787336 | Other | lineage6 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049672 | Other | lineage3 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140736 | RR-TB | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173310 | MDR-TB | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173740 | Other | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175473 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1180440 | Other | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR16156832 | RR-TB | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR1792022 | Other | La1.8.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR21469202 | Other | La1.7.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR21469200 | Other | La1.7.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None |
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