EBG00000313325 - n.649A>G

Drug resistance types
25 Sensitive 52 RR-TB 11 HR-TB 66 MDR-TB 29 Pre-XDR-TB 1 XDR-TB 213 Other
lineage Counts
lineage Count
lineage4.3.4.1;lineage4.9 1
lineage4.9 110
lineage2.2.1 64
lineage4.1.2.1;lineage4.9 2
lineage3 17
lineage4.4.1.1 8
lineage4.1.1.3 4
lineage4.3.3 11
La1.8.1 7
La1.3 2
lineage4.8 21
lineage4.1.2.1;lineage4.4.1.1 1
lineage4.4.1.2 1
lineage1.1.1.1 2
lineage3.1.2.1 5
lineage4.3.2.1 3
lineage4. 9
lineage2.2.1;lineage4.9 2
lineage4.3.4.1 3
lineage4.1;lineage4.9 1
lineage1.1.3.3 1
lineage4.1.2.1 12
lineage4.1.2.1;lineage4.4.1 1
lineage4.8.1 3
lineage4.6 1
lineage1.2.1.1 1
lineage2.1;lineage4.9;lineage7 1
lineage4.3.4.2 7
lineage4. 3
lineage4.2.2.2 4
lineage3.1.2.2 1
lineage4 1
lineage4.2.1 8
lineage4.2.1.1 3
lineage4.1.1.1 4
lineage4.3.3;lineage4.8 4
lineage2.2;lineage4.9 1
lineage4.1.2 3
lineage3;lineage4 2
lineage4.1.3 1
lineage2.2.1.1 5
lineage4.2.2 1
lineage2.2.2 6
lineage6.1.2 1
lineage4.4 1
La1.7.1 2
lineage4.7 3
lineage4.4.2 5
lineage4.6.1.1 1
lineage3.1.1 4
lineage1.1.1 1
lineage2;lineage4 1
lineage4. 2
La1.6 1
lineage2.2.1;lineage4 1
lineage4.9;lineage7 2
lineage2.1;lineage4.9 1
lineage4.3;lineage4.9 1
La2 1
lineage4.6.1.2 3
lineage3.1.2.1;lineage4.9 1
lineage1.2.2.2 1
lineage4.5 1
lineage5.1.1 1
lineage3.1.1;lineage4.9 1
lineage6.1.3 2
lineage4.3.2 1
La1.2 1
lineage4.9.1 1
La1.4 1
lineage4.3 1
lineage3.1.2 1
lineage4.2.1.1;lineage4.3.3 1
lineage2.2;lineage4 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4.2.1 1
lineage1.2.2 1
spoligotype Counts
spoligotype Count
None 397
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
ID Drug resistance Lineage Country iso2
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
ERR502473 RR-TB lineage4.9 None
SRR5818413 Sensitive lineage4.9 None
SRR18002981 Other lineage2.2.1 None
SRR5818432 MDR-TB lineage4.9 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR7645906 Other lineage2.2.1 None
SRR7070329 Other lineage3 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR9971333 MDR-TB lineage4.1.1.3 None
ERR867570 RR-TB lineage4.9 None
SRR14801652 HR-TB lineage4.3.3 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR12062542 Pre-XDR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
ERR5311077 Other La1.8.1 None
SRR5818389 Other lineage4.9 None
SRR5818460 Other lineage4.9 None
SRR5818464 Other lineage4.9 None
ERR4769436 Other La1.3 None
SRR5818398 Other lineage4.9 None
ERR10762495 MDR-TB lineage2.2.1 None
ERR978767 RR-TB lineage4.8 None
SRR11349203 MDR-TB lineage4.4.1.1 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
ERR3468488 Other La1.8.1 None
ERR126597 HR-TB lineage4.4.1.2 None
SRR5818425 Other lineage4.9 None
ERR10796597 Other lineage4.3.3 None
DRR185000 Other lineage1.1.1.1 None
SRR19303820 RR-TB lineage4.8 None
SRR5818459 Other lineage4.9 None
SRR18003023 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR7069097 Other lineage3.1.2.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR5818444 Sensitive lineage4.9 None
ERR323044 HR-TB lineage4. None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR867571 Other lineage4.9 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR1062871 RR-TB lineage4. None
SRR1196478 Other lineage4.9 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR9971168 Other lineage4.3.2.1 None
SRR1792011 Other La1.8.1 None
SRR1735598 RR-TB lineage4.9 None
ERR10796629 Other lineage4.1;lineage4.9 None
SRR5818442 Sensitive lineage4.9 None
SRR1062918 Other lineage3 None
SRR5818452 Other lineage4.9 None
ERR4798769 Other lineage1.1.3.3 None
ERR4819491 Other lineage4.1.2.1 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR2514215 Other lineage2.2.1 gb
ERR4808964 RR-TB lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR7755657 Other lineage4.8 None
ERR10796635 Other lineage4.8 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR6044936 Other lineage4.6 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR5818388 Other lineage4.9 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR5007167 RR-TB lineage4. None
SRR5818422 Other lineage4.9 None
SRR7069931 Other lineage4.2.2.2 None
SRR5818394 Other lineage4.9 None
SRR5818462 Other lineage4.9 None
SRR6046440 Other lineage3.1.2.2 None
SRR1181256 Other lineage4.9 None
SRR7131236 Other lineage4.3.4.2 None
SRR3675265 Other lineage4 None
SRR18002974 Other lineage2.2.1 None
SRR7131147 Other lineage4.1.2.1 None
SRR7069391 Other lineage4.9 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
ERR10796628 Other lineage4.3.3 None
SRR5818429 Sensitive lineage4.9 None
ERR10796564 Other lineage4.3.3 None
ERR5162090 RR-TB lineage4.9 None
SRR7617847 Other La1.8.1 None
ERR10796626 Other lineage4.1.2.1 None
SAMEA3501073 RR-TB lineage4.8 None
SRR3675552 Other lineage4.9 None
DRR184629 Other lineage2.2.1 None
SRR6046117 Other lineage4.9 None
ERR10796633 Other lineage4.3.4.2 None
SRR6397640 Other lineage4.2.1.1 None
SRR22249646 Sensitive lineage4.3.4.2 None
SRR18003038 Other lineage2.2.1 None
SRR8651616 MDR-TB lineage2.2.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR2027257 Other lineage4.1.2.1 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR6045909 Other lineage4.8.1 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR11342682 Other lineage4.1.2 None
ERR867574 Other lineage4.9 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
SRR3675230 Other lineage3;lineage4 None
ERR867573 Other lineage4.9 None
SRR11342671 RR-TB lineage4.1.3 None
SRR7645927 Other lineage4.8 None
SRR10315579 Other lineage2.2.1.1 None
SRR5818453 Sensitive lineage4.9 None
DRR188816 Other lineage4.2.2 None
SRR5163959 Other lineage4.9 None
ERR10796571 Other lineage4.9 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR7069800 Other lineage3.1.2.1 None
SRR19304094 Other lineage6.1.2 None
SRR16627752 RR-TB lineage4.4 None
ERR4816868 Other lineage4.4.1.1 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR5818423 RR-TB lineage4.9 None
ERR978765 RR-TB lineage4.8 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR5818431 Sensitive lineage4.9 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR5818386 Other lineage4.9 None
ERR10796565 Other lineage4.9 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR1049559 MDR-TB lineage4. None
SRR6982141 Other lineage4.3.3 None
ERR10796627 Other lineage4.1.2.1;lineage4.9 None
SRR21469200 Other La1.7.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR3675582 Other lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR867572 Other lineage4.9 None
SRR7645899 Other lineage2.2.1 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR4820030 Other lineage4.9 None
ERR3275190 Other lineage3 nl
SRR7131287 Other lineage2.2.1.1 None
SRR1173740 Other lineage3;lineage4 None
ERR2516381 Other lineage4.3.4.2 be
SRR11342646 HR-TB lineage3 None
SRR6046359 Other lineage4.7 None
SRR5818411 RR-TB lineage4.9 None
SRR1140716 Other lineage3 None
ERR867544 Other lineage4.9 None
SRR6046376 Other lineage3 None
ERR9117788 Other lineage3 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR5818456 Other lineage4.9 None
SRR7131121 Other lineage4.3.3 None
ERR212114 Other lineage4. None
SRR11342698 RR-TB lineage4.4.1.1 None
ERR502474 RR-TB lineage4.9 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR11342640 MDR-TB lineage4.3.3 None
SRR9971112 HR-TB lineage2.2.1 None
ERR4813263 MDR-TB lineage4.8 None
ERR978766 RR-TB lineage4.8 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR1173281 Other lineage3 None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR7535047 RR-TB lineage4.6.1.1 None
ERR3797062 RR-TB lineage4.9 None
DRR185024 Other lineage2.2.2 None
SRR5818396 Other lineage4.9 None
SRR5818393 Other lineage4.9 None
ERR10796636 Other lineage4.1.2.1 None
SRR5818427 HR-TB lineage4.9 None
ERR2886463 Sensitive lineage2.2.1 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR5818408 Other lineage4.9 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR21658550 Other lineage1.1.1 None
ERR10762248 MDR-TB lineage4.2.1 None
SRR9971046 MDR-TB lineage4.8 None
ERR3275615 Sensitive lineage4.4.1.1 nl
SRR1184329 Other lineage4.9 None
ERR10796553 Other lineage4.9 None
SRR12062533 Pre-XDR-TB lineage2.2.1.1 None
ERR4819383 RR-TB lineage4.9 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR6785281 Other lineage4.2.1.1 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1173770 Other lineage4.9 None
SRR21469202 Other La1.7.1 None
ERR3283021 MDR-TB lineage4.9 None
SRR11342644 MDR-TB lineage4. None
SRR5818440 Other lineage4.9 None
ERR4024582 MDR-TB lineage4.1.2.1 None
SRR1792022 Other La1.8.1 None
SRR5818428 Sensitive lineage4.9 None
SRR5818414 Other lineage4.9 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR5818470 Other lineage4.9 None
SRR10993951 RR-TB La1.6 None
SRR1181403 Other lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR5818400 Other lineage4.9 None
SRR18002891 MDR-TB lineage2.2.1 None
ERR4815783 Other lineage4.1.2.1 gb
SRR1175472 RR-TB lineage4.3.4.1 None
ERR867568 Other lineage2.2.1;lineage4 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR5818439 Sensitive lineage4.9 None
SRR5818402 Other lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR6045843 Other lineage4.2.2.2 None
SRR18909918 Other lineage2.2.1.1 None
ERR387051 RR-TB lineage4.9 None
SRR5818435 Sensitive lineage4.9 None
ERR4820019 Other lineage4. None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR7070521 Other lineage4.2.1.1 None
ERR2513405 Other lineage2.2.1 None
SRR5818399 Sensitive lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR6045002 RR-TB lineage4.9 None
SRR11342686 MDR-TB lineage4.8 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR19303949 Other lineage4.3.3 None
ERR036207 Other lineage4.3;lineage4.9 None
ERR4829437 Sensitive lineage4.3.4.2 it
ERR867554 Other lineage4.3.4.1 None
SRR7070293 Other lineage4.8 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR19304104 Other lineage4.8 None
SRR5818426 Other lineage4.9 None
SRR13888750 Other La2 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003009 MDR-TB lineage2.2.1 None
ERR5979454 Pre-XDR-TB lineage3 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR18003031 HR-TB lineage2.2.1 None
SRR10315567 HR-TB lineage2.2.1 None
SRR7645928 Other lineage4.7 None
SAMN02380982 MDR-TB lineage4. None
SRR7755649 MDR-TB lineage4.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR6046484 Other lineage1.2.2.2 None
SRR18003007 MDR-TB lineage4.5 None
SRR5007204 Other lineage4.1.2.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
ERR5917972 MDR-TB lineage4.4.1.1 za
SRR6046020 Other lineage3 None
ERR502517 Other lineage5.1.1 None
SRR7070195 Sensitive lineage3.1.2.1 None
SRR6046210 Other lineage4.9 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR5818421 Sensitive lineage4.9 None
SRR7646018 MDR-TB lineage4.2.1 None
SRR6045496 Other lineage6.1.3 None
ERR3276144 Other lineage3 nl
ERR9117805 Other lineage4.3.2 None
SRR5818404 Other lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR5818448 Other lineage4.9 None
SRR5818405 Other lineage4.9 None
DRR184982 Other lineage2.2.1 None
ERR10796560 Other lineage4.9 None
SRR5818424 Sensitive lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4820193 Other lineage3 None
ERR10796577 Other lineage4.9 None
SRR5818415 Sensitive lineage4.9 None
SRR19303907 Other lineage4.8 None
SRR5818437 RR-TB lineage4.9 None
SRR5818455 Sensitive lineage4.9 None
SRR7236399 Other La1.8.1 None
ERR867567 RR-TB lineage3 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR1173170 Other lineage4.9 None
ERR2600422 MDR-TB lineage2.2.1 None
SRR3675509 Other lineage4.9 None
SRR1173719 Other lineage4.9 None
SRR5818458 Other lineage4.9 None
ERR4769418 Other La1.2 None
ERR4818831 Other lineage3 None
SRR7236330 Other La1.8.1 None
SRR11342696 MDR-TB lineage4. None
ERR867538 Other lineage4.2.2.2 None
ERR3797047 MDR-TB lineage4.9 None
SRR6044904 Other lineage3 None
SRR6045158 Other lineage4.9 None
SRR5818385 Other lineage4.9 None
SRR7131145 Other lineage4.1.2.1 None
ERR10796589 Other lineage4.9 None
SRR16156775 Other lineage4.9 None
SRR9971065 RR-TB lineage2.2.1 None
SRR13423546 Other lineage4.4.2 None
ERR10796598 Other lineage4.9 None
SRR11342658 RR-TB lineage4.1.2 None
SRR5818409 Other lineage4.9 None
SRR7131195 Other lineage2.2.1 None
ERR752012 HR-TB lineage1.1.1.1 None
SRR18003032 Other lineage2.2.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
ERR502470 RR-TB lineage4.9 None
SRR1173310 Other lineage3.1.1 None
SRR18003045 Other lineage2.2.1 None
SRR1140753 RR-TB lineage4. None
SRR9971122 MDR-TB lineage4.8 None
ERR037504 Other lineage4.9.1 None
SRR1173185 Other lineage4.9 None
SRR16278274 Other La1.4 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR10796593 Other lineage4.3 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR1180446 Other lineage4.9 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
ERR2027250 Other lineage3.1.2 None
ERR867569 Other lineage4.9 None
SRR5818445 Other lineage4.9 None
SRR7070157 Other lineage4. None
ERR867522 Pre-XDR-TB lineage2.2.1 None
SRR5818397 Other lineage4.9 None
SRR5007193 RR-TB lineage4. None
SRR5818407 Sensitive lineage4.9 None
SRR1049560 MDR-TB lineage4. None
ERR4820798 Other lineage3.1.2.1 gb
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR7131068 Other lineage4.8 None
SRR7069922 Other lineage2.2.1 None
ERR4821172 RR-TB lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR5818395 Sensitive lineage4.9 None
SRR7070134 Other lineage3.1.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR7645971 Other lineage2.2.1 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
ERR4819007 Other lineage2.2.1 None
SRR1180440 Other lineage4.9 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR502481 RR-TB lineage4.9 None
SRR5818446 Other lineage4.9 None
SRR7131123 Other lineage4.8 None
SRR16156697 RR-TB lineage2.2.1 None
SRR6046839 Other lineage4.9 None
SRR18002933 Other lineage2.2.1 None
ERR4769554 RR-TB lineage4.9 None
SRR11342669 Other lineage4.8 None
ERR4815022 Other lineage3.1.2.1 None
SRR7755655 Other lineage4.1.2.1 None
SRR15316595 RR-TB lineage4.4.2 None
ERR3806588 Other lineage6.1.3 None
ERR10796581 Other lineage4.1.2 None
ERR4457829 MDR-TB lineage4.1.2.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4769433 RR-TB lineage4.9 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR5818469 Other lineage4.9 None
ERR867575 Other lineage4.9 None
SRR21727760 Other lineage2.2.1 None
ERR10219876 Other lineage4.3.4.2 None
ERR3077969 Other La1.3 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR10796620 Other lineage4.1.1.1 None
SRR6045267 RR-TB lineage4.8 None
ERR10796634 Other lineage4.7 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR5818449 MDR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR2446509 Other lineage3 nl
SRR18002937 Other lineage2.2.1 None
SRR5818647 Other lineage4. None
SRR18002963 Other lineage2.2.1 None
SRR7755652 Pre-XDR-TB lineage2.2.1;lineage4.2.1 None
ERR4818126 Other lineage1.2.2 None
SRR1140736 Other lineage4.1.2.1 None
SRR6044983 Other lineage3.1.1 None
ERR10796559 Other lineage4.9 None
ERR867526 MDR-TB lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
ERR10796592 Other lineage4.9 None
SRR7069835 Other lineage2.2.1 None
ERR10796591 Other lineage4.9 None