Rv0668 - c.273G>C


Drug resistance types
45 Sensitive 79 RR-TB 74 HR-TB 59 MDR-TB 34 Pre-XDR-TB 1 XDR-TB 131 Other
lineage Counts
lineage Count
lineage4.9 105
lineage2.2.1 46
La2 1
lineage4.3.3 10
lineage4.2.1 8
44
La1.4 1
lineage4.4 1
lineage1.2.1.2.1 1
lineage4.4.1.1 8
La1.8.1 7
lineage2.2.2 6
lineage4.6.2.2 2
lineage3 23
lineage4.8 17
La1.7.1 2
lineage1.1.1 1
lineage4.2;La1.7 1
lineage1.2.2 1
lineage4.1 2
lineage3;lineage2.1 1
lineage1.1.3.1 3
lineage2.2 4
lineage4.1.1 3
lineage4 13
lineage4.3.4.2.1 9
lineage3.1.2.1 2
lineage4.1.2.1 27
lineage3.1 3
lineage4.1.1.3 4
lineage4.6.1.2 5
lineage4;lineage1.1.2 1
lineage4.3.4.2 1
lineage1 1
lineage4.3 1
lineage4.1.1.3.1 3
lineage4.8.2 1
lineage3.1.1 2
lineage1.2.2.2 1
lineage4.9;lineage4.2.1 1
lineage4.2.2.2 1
lineage3.1.2 1
lineage4.7 4
lineage1.1 1
lineage5.1.1 1
lineage4.6.1.1 1
lineage4.1.2 1
lineage4.3.2.1 4
lineage4.8.1 1
lineage1.1.1.1 1
lineage4.9;lineage1.1 1
lineage4.4.1.2 1
La1.7.X-unk4 1
lineage6.2.3;lineage1.1.2 1
lineage4.9;La1.3 3
La1.3 7
La1.2 1
lineage4.3.4.1 1
lineage4.5;lineage2.2.1 1
lineage4.7;lineage4.3.4.2 1
lineage2.2.1.2 1
lineage4.1.2.1.1 1
lineage4.3.2 1
lineage4.1.1.2 1
lineage4.9.1 1
lineage2 2
lineage4.8;lineage4.3.3 4
lineage4.4.1.1;lineage4.1.2.1 1
La1.6 1
lineage4.9;lineage2.2 1
lineage4.4.1.1.1 1
lineage4.5 1
spoligotype Counts
spoligotype Count
None 423
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR13837631 Sensitive lineage4.9 None
SRR13861153 Other lineage4.9 None
SRR13861224 Sensitive lineage4.9 None
SRR13861180 Other lineage4.9 None
SRR13861241 HR-TB lineage4.9 None
SRR13861288 Other lineage4.9 None
SRR13861362 Other lineage4.9 None
SRR13861305 Other lineage4.9 None
SRR13861329 Other lineage4.9 None
SRR13861332 Other lineage4.9 None
SRR13861413 Sensitive lineage4.9 None
SRR13861611 Sensitive lineage4.9 None
SRR13861510 Other lineage4.9 None
SRR13861528 HR-TB lineage4.9 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR13861629 RR-TB lineage4.9 None
SRR13888750 Other La2 None
SRR13861663 Sensitive lineage4.9 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR16156832 RR-TB None
SRR16157123 Other lineage4.9 None
SRR16278274 Other La1.4 None
SRR16627752 RR-TB lineage4.4 None
SRR1510066 Other lineage1.2.1.2.1 None
SRR16156697 MDR-TB lineage2.2.1 None
SRR16156775 Other lineage4.9 None
SRR1640750 HR-TB None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR1792011 Other La1.8.1 None
SRR1791696 Other La1.8.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002908 Other lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002956 HR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR19303773 Other lineage4.6.2.2 None
SRR18213736 MDR-TB lineage3 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18213721 Other lineage4.8 None
SRR21469201 Other La1.7.1 None
SRR19303820 RR-TB lineage4.8 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR21658550 Other lineage1.1.1 None
SRR21469202 Other La1.7.1 None
SRR21677886 Sensitive lineage4.9 None
ERR4815121 HR-TB lineage4.6.2.2 None
SRR22424851 MDR-TB lineage4.3.3 None
SRR23961559 Other lineage4.2;La1.7 None
ERR4815225 RR-TB lineage1.2.2 None
SRR3675464 HR-TB lineage4.1 None
ERR1035239 HR-TB None
SRR6325445 HR-TB None
ERR161033 HR-TB None
SRR3675482 HR-TB None
ERR2229148 Other lineage4.8 dk
SRR3675486 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
ERR4814841 Other lineage4.1 None
ERR4814617 Other lineage1.1.3.1 None
SRR3675230 RR-TB lineage3 None
ERR4814763 Other lineage2.2.1 None
SRR3601585 Pre-XDR-TB lineage2.2 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3619764 Pre-XDR-TB lineage2.2 None
ERR4814623 Other lineage4.8 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR4814709 Other lineage4.1.1 None
ERR1750907 RR-TB None
ERR1750908 Sensitive lineage4 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR4813263 MDR-TB lineage4.8 None
ERR4815079 RR-TB lineage3 None
ERR4814976 Other lineage4.9 None
SRR3675383 HR-TB None
ERR4815556 RR-TB lineage3 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4815022 Other lineage3.1.2.1 None
ERR4815572 Other lineage4.1.2.1 None
ERR4816254 Sensitive lineage4.9 None
ERR4815909 Other lineage4.8 None
ERR2027257 Other lineage4.1.2.1 None
SRR3675545 HR-TB None
SRR3675552 RR-TB lineage4.9 None
ERR4816231 Other lineage4 None
ERR2027290 RR-TB lineage3.1 None
ERR4816214 Sensitive lineage4.9 None
ERR4816322 Other lineage4.9 None
ERR4816300 Other lineage4.1.2.1 None
SRR3675558 HR-TB None
ERR4817069 RR-TB None
ERR4816417 Other lineage4.9 None
ERR4816476 Other lineage3.1.2.1 None
ERR4817131 Pre-XDR-TB None
ERR4817127 Other lineage4.1.2.1 None
ERR2229234 RR-TB lineage4.8 None
ERR2229233 Sensitive lineage4 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4816729 Sensitive lineage4.9 None
SRR4033549 HR-TB lineage2.2.2 None
ERR4816852 Other lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR2432997 Other lineage4.8 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR2510831 Other lineage4.3.3 None
ERR4818126 RR-TB lineage1 None
ERR3275196 Other lineage2.2.1 nl
ERR2229143 Other lineage4.1.1 None
ERR4819002 HR-TB lineage4.8 None
ERR2513405 Other lineage2.2.1 None
ERR4818128 RR-TB lineage4.1.2.1 None
ERR4818825 HR-TB lineage4.1.2.1 None
ERR4819073 Other lineage4.1.2.1 None
ERR4818507 RR-TB lineage4.1.2.1 None
ERR4818259 RR-TB lineage4.1.1 None
ERR3275941 RR-TB lineage4.3 nl
ERR4818851 RR-TB lineage4.4.1.1 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR2512606 MDR-TB lineage3 None
ERR4818904 Other lineage4.8 None
ERR4818583 Other lineage4.3.3 None
ERR2509886 RR-TB lineage3 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
ERR3275709 HR-TB lineage3 nl
SRR5007169 RR-TB lineage4.8.2 None
SRR5007168 RR-TB lineage4.9 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR4820266 RR-TB lineage3 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR5007170 RR-TB lineage4.9 None
ERR4818977 RR-TB lineage4.1.2.1 None
ERR4819528 RR-TB lineage3 None
ERR4819383 RR-TB lineage4.9 None
ERR4819307 RR-TB lineage4 None
ERR4820746 RR-TB lineage3 None
SAMN02414850 Other lineage4.1.2.1 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819863 RR-TB lineage4.9 None
ERR4820503 Other lineage2.2.1 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR4819876 HR-TB lineage4.3.4.2.1 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR2515032 Other lineage3 None
ERR1023509 Other None
ERR4820030 Other lineage4.9 None
ERR4821007 RR-TB lineage1.2.2.2 None
ERR2446563 Other lineage2.2.1 nl
ERR4821057 HR-TB lineage4 None
ERR2693239 HR-TB None
ERR4821053 Other lineage3 None
ERR4821119 Other lineage4.4.1.1 None
ERR4821172 RR-TB lineage4.9 None
SRR6045553 RR-TB lineage4.9 None
SRR6046117 RR-TB lineage4.9 None
ERR278594 HR-TB None
ERR4822138 Other lineage4.1.2.1 None
ERR4821176 Pre-XDR-TB lineage2.2.1 None
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
ERR4821550 Other lineage2.2.1 None
ERR4821616 Other lineage1.1.3.1 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4821704 MDR-TB lineage4.3.3 None
SRR6045664 Other lineage4.2.1 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6045683 Other lineage3.1.2 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6044841 Other lineage4.9 None
SRR6044936 Other lineage4 None
SRR6045909 Other lineage4.8 None
SRR6044952 RR-TB lineage4.9 None
SRR6045957 Other lineage4.9 None
SRR6046359 Other lineage4.7 None
SRR6045952 HR-TB None
SRR6045002 MDR-TB lineage4.9 None
SRR6325442 HR-TB None
SRR6046225 HR-TB None
SRR6046291 Other lineage3 None
SRR6045191 Sensitive lineage4.9 None
SRR6045267 RR-TB lineage4 None
SRR6046250 Other lineage4.9 None
SRR6325444 HR-TB None
SRR6046376 Other lineage3 None
ERR4829816 RR-TB lineage4.4.1.1 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6046514 HR-TB None
SRR6046737 Other lineage4.9 None
SRR6046839 Other lineage4.9 None
SRR6325448 HR-TB None
SRR6325447 HR-TB None
ERR502470 RR-TB lineage4.9 None
SRR6397654 HR-TB lineage4.1.2.1 None
ERR3077978 Other lineage1.1 None
ERR323037 HR-TB lineage4 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR4831546 HR-TB lineage2.2 None
ERR323034 HR-TB lineage3.1 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
ERR294248 HR-TB None
SRR6896383 RR-TB lineage4.4.1.1 None
ERR502517 MDR-TB lineage5.1.1 None
SRR6832644 Other lineage4.3.3 None
ERR323036 HR-TB None
ERR502531 Other lineage4.9 None
ERR5311099 HR-TB None
ERR5311090 HR-TB None
ERR5311077 RR-TB La1.8.1 None
ERR5311081 HR-TB None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR7496523 Other lineage4.7 None
SRR9970980 Other lineage4.1.2 None
ERR323038 HR-TB None
SRR7496471 Sensitive None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR7645899 RR-TB lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR7645924 Pre-XDR-TB lineage4.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR7645928 RR-TB lineage4.7 None
SRR7645927 Other lineage4.8 None
SRR7645971 Other lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR9971046 MDR-TB lineage4.8 None
SRR9971065 RR-TB lineage2.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR7755655 Other lineage4.1.2.1 None
SRR9971122 MDR-TB lineage4.8 None
SRR9971113 Other lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR1023295 HR-TB lineage4.1.2.1 None
SRR9971168 Other lineage4.3.2.1 None
ERR323041 HR-TB None
ERR323055 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323063 HR-TB None
DRR185000 Other lineage1.1.1.1 None
ERR3283006 RR-TB lineage4.9 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR10762275 MDR-TB lineage4.2.1 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10796627 Other lineage4 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR11465833 Sensitive lineage4.3.2.1 None
ERR3445487 Other La1.7.X-unk4 None
ERR3283032 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR3283013 MDR-TB lineage4 None
ERR3283017 HR-TB None
ERR3283041 Other lineage4.9 None
ERR3439265 Other lineage4.9 None
ERR3468488 RR-TB La1.8.1 None
ERR3468613 RR-TB La1.8.1 None
ERR3468544 HR-TB None
ERR3797016 HR-TB None
ERR3797062 RR-TB lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR3797083 HR-TB None
ERR3797082 Other lineage4.9 None
ERR4769502 RR-TB lineage4.9;La1.3 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4769436 Other La1.3 None
ERR4769495 Other La1.3 None
ERR4188213 HR-TB La1.8.1 None
ERR4188350 HR-TB None
ERR4769408 Other La1.3 None
ERR4769419 Other lineage4.9 None
ERR4769418 Other La1.2 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769530 RR-TB lineage4.9 None
ERR4769508 RR-TB lineage4.9 None
ERR4769516 Other La1.3 None
ERR4769514 Other La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769553 RR-TB lineage4.9 None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR5917710 Other lineage4.1.2.1 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR5979454 Pre-XDR-TB lineage3 None
ERR6197021 MDR-TB lineage4.7;lineage4.3.4.2 None
ERR6197038 HR-TB lineage4.9 None
ERR4769552 Other La1.3 None
ERR4769555 Other La1.3 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR5908228 Other lineage4.3.3 None
ERR6052085 Pre-XDR-TB lineage2.2.2 None
ERR6052110 Pre-XDR-TB lineage2.2.2 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6358837 HR-TB None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR736831 HR-TB lineage4.9 None
ERR772255 MDR-TB lineage4.3.2 None
ERR212114 Other lineage4.3.4.2.1 None
ERR8975044 Other lineage4.1.1.2 None
ERR037504 Other lineage4.9.1 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR9029360 MDR-TB lineage2.2.1 None
ERR9119096 Other lineage4.3.3 None
ERR8976043 HR-TB None
ERR970449 RR-TB lineage4.1.1.3 None
SRR10315556 Sensitive lineage2.2.1 None
ERR9896153 RR-TB lineage4.4.1.1 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR069989 HR-TB lineage2 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR987707 MDR-TB lineage4.7 None
SRR069978 Pre-XDR-TB lineage2.2.2 None
SRR069981 HR-TB lineage2.2.2 None
SRR10315751 MDR-TB lineage4.8 None
SRR10315551 Sensitive lineage2.2.1 None
SRR10315567 Other lineage2.2.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1049672 Other lineage3 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062928 RR-TB lineage4 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR10993951 RR-TB La1.6 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR11342634 MDR-TB lineage4.8 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR1140736 RR-TB None
SRR1140716 Pre-XDR-TB lineage3 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1162740 Other lineage4.1.2.1 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1165423 Other lineage4.1.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1165584 Other lineage4.1.2.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1173185 HR-TB lineage4.9 None
SRR1172717 Other lineage4.9 None
SRR1173170 Other lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR1173310 MDR-TB None
SRR1173281 RR-TB lineage3 None
SRR1173719 HR-TB lineage3 None
SRR1173453 Other lineage4.4.1.1 None
SRR1173770 Other lineage4.9 None
SRR1173740 Other None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1175474 HR-TB lineage4.9 None
SRR1175473 Other lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1175491 MDR-TB lineage4 None
SRR1175487 Sensitive lineage4.9 None
SRR1175472 MDR-TB lineage4 None
SRR1180399 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180420 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181283 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181402 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1183054 Sensitive lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR1184021 Sensitive lineage4.9 None
SRR1184329 MDR-TB lineage4.9 None
SRR1196478 MDR-TB lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR13423544 Other lineage4.5 None
SRR12634609 MDR-TB lineage3.1.1 None