EBG00000313325 - n.1402C>A
Drug resistance types
0 Sensitive
86 RR-TB
27 HR-TB
96 MDR-TB
48 Pre-XDR-TB
1 XDR-TB
408 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 40 |
| lineage4.1.1.3.1 | 3 |
| lineage2.2.1 | 106 |
| lineage4.9 | 120 |
| lineage4.8 | 82 |
| lineage1.1.3.3 | 1 |
| lineage4.4.1.1 | 15 |
| lineage4.2.1 | 13 |
| lineage4.1.2.1 | 30 |
| lineage4.3.4.2.1 | 10 |
| lineage4.4.1.2 | 3 |
| La1.3 | 3 |
| lineage2.2.1;lineage4.8 | 2 |
| La1.6 | 1 |
| lineage4.3.4.2 | 9 |
| lineage3.1.3 | 1 |
| lineage3.1.1 | 6 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.4.2 | 5 |
| lineage2.2.2 | 10 |
| lineage4.1.2 | 5 |
| lineage1.2.2.2 | 4 |
| La3 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.6.5 | 3 |
| lineage4.2.1.1 | 3 |
| lineage4.3.3 | 17 |
| lineage2.2;lineage4 | 1 |
| lineage4.8.1 | 3 |
| lineage4.7 | 4 |
| lineage2.2.1;lineage4.2.2;lineage4.4.2 | 1 |
| lineage4.1.1.3 | 18 |
| lineage4.1.3 | 1 |
| La1.8.1 | 13 |
| La1.7.1 | 3 |
| lineage6.1.2 | 1 |
| lineage4.4 | 2 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage1.1.2 | 2 |
| lineage4.3;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.9 | 3 |
| lineage4.6.2.2 | 7 |
| lineage2.2.1.1 | 4 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.2 | 5 |
| lineage3;lineage4 | 2 |
| lineage6.3.1 | 2 |
| lineage6.1.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.3.4.1 | 9 |
| lineage4.1.1.1 | 7 |
| 1 | |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.8.2 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.6.1.1 | 4 |
| lineage3.1.2.2 | 3 |
| lineage4.6.1.2 | 4 |
| lineage4 | 4 |
| lineage4.2.2.2 | 8 |
| lineage4.3 | 2 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.1.1.2 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.5 | 2 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage3.1.2.1 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage3;lineage4.2.2.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.2.2 | 1 |
| La2 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage5.1.1 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage4.9.1 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage1.1.3.2 | 1 |
| lineage1.1.1.1 | 2 |
| lineage2;lineage4 | 1 |
| lineage4.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage3.1.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 666 |
Geographic prevalence
Country level data for this variant is available for 29 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR19303899 | Other | lineage3 | None | ERR017781 | Other | lineage3 | None | SRR6046442 | Other | lineage3 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180815 | Other | lineage4.9 | None | SRR1180530 | Other | lineage4.9 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4798769 | Other | lineage1.1.3.3 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | SRR7131275 | Other | lineage4.1.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1180583 | Other | lineage4.9 | None | ERR6358979 | HR-TB | lineage4.9 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR4769480 | Other | La1.3 | None | SRR6044952 | Other | lineage4.9 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | ERR2600561 | Other | lineage2.2.1;lineage4.8 | None | SRR1183479 | Other | lineage4.9 | None | SRR7131068 | Other | lineage4.8 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1181403 | Other | lineage4.9 | None | ERR6197037 | MDR-TB | lineage4.3.4.2 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR7070134 | Other | lineage3.1.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR7645971 | Other | lineage2.2.1 | None | ERR978756 | Other | lineage4.8 | None | SRR1180440 | Other | lineage4.9 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | ERR6197032 | Other | lineage4.9 | None | SRR7069158 | Other | lineage3 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR1181256 | Other | lineage4.9 | None | SRR7070495 | Other | lineage4.1.2.1 | None | ERR4829196 | Other | lineage4.1.2 | None | SRR6397579 | Other | lineage4.4.1.2 | ca | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR7070315 | Other | lineage4.8 | None | ERR019855 | Other | lineage3 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR10321138 | Other | La3 | None | SRR5007163 | Other | lineage3;lineage4.9 | None | ERR2229811 | Other | lineage4.8 | dk | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR10796581 | Other | lineage4.1.2 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR978726 | RR-TB | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | SRR19303784 | Other | lineage4.2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR11349194 | MDR-TB | lineage4.3.3 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR7068885 | Other | lineage3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | ERR10796634 | Other | lineage4.7 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR7131114 | Other | lineage4.1.2 | None | SRR18002873 | Pre-XDR-TB | lineage2.2.1;lineage4.2.2;lineage4.4.2 | None | SRR6045603 | Other | lineage4.1.1.3 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR2228838 | Other | lineage4.8 | None | ERR2513405 | Other | lineage2.2.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR7236134 | Other | La1.8.1 | None | SRR7645927 | Other | lineage4.8 | None | ERR978735 | Other | lineage4.8 | None | ERR978762 | Other | lineage4.8 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR1815538 | Other | La1.7.1 | None | ERR4818904 | Other | lineage4.8 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR19304094 | Other | lineage6.1.2 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR4816868 | Other | lineage4.4.1.1 | None | SRR6045002 | RR-TB | lineage4.9 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR1181499 | Other | lineage4.9 | None | SRR7755652 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR7070293 | Other | lineage4.8 | None | SRR18002956 | Other | lineage2.2.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR978727 | Other | lineage4.8 | None | ERR4820723 | Other | lineage4.4.1.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | ERR4830864 | MDR-TB | lineage4.4.1.1 | sz | SRR18003009 | MDR-TB | lineage2.2.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR7645928 | Other | lineage4.7 | None | SRR3675582 | Other | lineage4.9 | None | SRR5485526 | RR-TB | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR18002997 | Other | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR1183241 | Other | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR1034852 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR6046177 | Other | lineage3.1.2 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR11349175 | Other | lineage2.2.1 | None | SRR7070329 | Other | lineage3 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1175474 | Other | lineage4.9 | None | ERR978693 | Other | lineage4.8 | None | SRR1792025 | Other | La1.8.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR4818440 | Other | lineage6.3.1 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | ERR3014599 | Pre-XDR-TB | lineage4.1.2.1 | tn | SRR6045496 | Other | lineage6.1.3 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR10796617 | Other | lineage4.3.4.1 | None | SRR1183704 | Other | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR5979407 | Other | lineage3 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4828811 | Other | lineage4.1.1.1 | None | ERR2229541 | Other | lineage4.8 | None | ERR4187652 | Other | lineage4.9 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | ERR4817069 | RR-TB | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | SRR1180518 | Other | lineage4.9 | None | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR2514215 | Other | lineage2.2.1 | gb | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR10796635 | Other | lineage4.8 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR978694 | Other | lineage4.8 | None | SRR9971200 | MDR-TB | lineage4.3.2 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR7068941 | Other | lineage4.8.2 | None | SRR22048550 | Other | lineage1.1.3.1 | None | ERR2600562 | MDR-TB | lineage2.2.1;lineage4.8 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183237 | Other | lineage4.9 | None | SRR1173182 | Other | lineage4.6.1.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR10796561 | Other | lineage4.3.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR5485603 | Other | lineage4.9 | None | SRR7070553 | Other | lineage3 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | ERR3468613 | Other | La1.8.1 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR3675565 | Other | lineage4 | None | SRR16089407 | Other | lineage4.8 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR978747 | Other | lineage4.8 | None | SRR1183437 | Other | lineage4.9 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR038289 | Other | lineage4.3.3 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR1181199 | Other | lineage4.9 | None | SRR18911982 | Other | lineage4.4 | None | SRR7131183 | MDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR7131229 | Other | lineage4.1.2.1 | None | ERR10796626 | Other | lineage4.1.2.1 | None | ERR10796599 | Other | lineage4.8 | None | SRR6046117 | Other | lineage4.9 | None | SRR7068982 | Other | lineage4.3.2 | None | ERR3283043 | Other | lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755642 | MDR-TB | lineage4.2.1 | None | SRR14296220 | Other | La1.8.1 | None | SRR18003038 | Other | lineage2.2.1 | None | ERR2984782 | Pre-XDR-TB | lineage4.3.3 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR1238559 | Other | lineage4.9 | None | ERR3077969 | Other | La1.3 | None | ERR2229791 | Other | lineage4.9 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR5908124 | Other | lineage4.8 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR19303817 | Other | lineage2.2.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1180032 | Other | lineage4.9 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR7645973 | Other | lineage4.3.4.1 | None | ERR2446509 | Other | lineage3 | nl | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR7070521 | Other | lineage4.2.1.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR10796571 | Other | lineage4.9 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | SRR3675252 | Other | lineage1.1.2 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR4811708 | HR-TB | lineage4 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR1183188 | Other | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR10796592 | Other | lineage4.9 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR10796591 | Other | lineage4.9 | None | SRR5485513 | RR-TB | lineage4.9 | None | SRR1180737 | Other | lineage4.9 | None | ERR10796590 | Other | lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | ERR911930 | Other | lineage4.8 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR6044841 | Other | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR5818684 | Other | lineage4.2.2.2 | None | ERR867572 | Other | lineage4.9 | None | SAMEA3450033 | Other | lineage4.8 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR4815816 | Other | lineage4.5 | gb | SRR6046521 | Other | lineage4.4.1.1 | None | SRR7131032 | Other | lineage2.2.1 | None | ERR10796594 | Other | lineage4.9 | None | ERR1750889 | Other | lineage4.4.1.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR5818690 | Other | lineage4.2.2.2 | None | SRR1181191 | Other | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | SRR6046701 | Other | lineage3.1.2.2 | None | ERR10796596 | Other | lineage4.9 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR6046210 | Other | lineage4.9 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR6046655 | Other | lineage4.1.2.1 | None | ERR5311077 | Other | La1.8.1 | None | SRR11342646 | HR-TB | lineage3 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR1140716 | Other | lineage3 | None | SRR6046376 | Other | lineage3 | None | SRR7070087 | Other | lineage4.8.1 | None | SRR023487 | RR-TB | lineage2.2.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR9117788 | Other | lineage3 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | SRR18002948 | Other | lineage2.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | SRR8600288 | Other | La1.8.1 | None | SRR1181496 | Other | lineage4.9 | None | ERR6197039 | MDR-TB | lineage4.3.4.2 | None | SRR7070144 | Other | lineage4.8 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR4817840 | Other | lineage3.1.2.2 | gb | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR7070369 | Other | lineage1.2.2.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR3675496 | Other | lineage4.1.1.3 | gb | SRR10869285 | Pre-XDR-TB | lineage2.2.2 | None | SRR19303773 | Other | lineage4.6.2.2 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR10796562 | Other | lineage4.3.4.1 | None | SRR1183153 | Other | lineage4.9 | None | SRR7755657 | Other | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR4830856 | MDR-TB | lineage4.4.1.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR867566 | Other | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR1184012 | Other | lineage4.1.1.3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR7585400 | MDR-TB | lineage3 | None | ERR4819641 | Other | lineage4.6.2.2 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR7131123 | Other | lineage4.8 | None | SRR6046839 | Other | lineage4.9 | None | SRR6045553 | Other | lineage4.1.2.1;lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR2229436 | Other | lineage4.8 | None | SRR1181593 | Other | lineage4.9 | None | SRR7645974 | Other | lineage4.3.4.1 | None | ERR2228810 | Other | lineage4.8;lineage4.9 | None | ERR2229733 | Other | lineage4.8 | dk | ERR11465563 | Other | lineage4.1.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4817204 | Other | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR4815556 | RR-TB | lineage3 | None | ERR4828879 | HR-TB | lineage3 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR1140724 | Other | lineage2.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR11465301 | Other | lineage4.3.4.2.1 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR4822114 | Other | lineage4.1.2.1 | None | SRR1183309 | Other | lineage4.9 | None | SRR1181542 | Other | lineage4.9 | None | SRR7131161 | Other | lineage4.8 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR1180174 | Other | lineage4.9 | None | SRR7070446 | Other | lineage3 | None | SRR1182954 | Other | lineage4.9 | None | ERR502523 | Other | lineage6.3.1 | None | ERR4863405 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR7069082 | Other | lineage4.1.2.1 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR7069314 | Other | lineage3 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR5818694 | Other | lineage3;lineage4.2.2.2 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR1180735 | Other | lineage4.9 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR1183122 | Other | lineage4.9 | None | ERR4817434 | Other | lineage3 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR10796556 | Other | lineage4.3.4.1 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR978748 | Other | lineage4.8 | None | ERR5087596 | Other | La1.8.1 | None | ERR2517074 | Pre-XDR-TB | lineage3 | gb | SRR19303949 | Other | lineage4.3.3 | None | ERR10796640 | Other | lineage4.1.2.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | ERR10796568 | Other | lineage4.9 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR6152980 | HR-TB | lineage4.8 | ca | ERR2027232 | Other | lineage4.3.4.2 | None | SRR19304104 | Other | lineage4.8 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR6044983 | Other | lineage3.1.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR5087846 | Other | La1.8.1 | None | ERR4812328 | Other | lineage4.3.3 | pe | SRR13888750 | Other | La2 | None | SRR6982141 | Other | lineage4.3.3 | None | SRR21469200 | Other | La1.7.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR5485525 | RR-TB | lineage4.9 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | SRR7069851 | Pre-XDR-TB | lineage3 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR6153166 | Other | lineage1.2.1.2.1 | ca | SRR7131061 | Other | lineage2.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | ERR751345 | Other | lineage5.1.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR10796595 | Other | lineage4.9 | None | SRR1181286 | Other | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | ERR867555 | Other | lineage3 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR6046020 | Other | lineage3 | None | ERR502517 | Other | lineage5.1.1 | None | SRR7131182 | Other | lineage4.1.2.1 | None | ERR4820030 | Other | lineage4.9 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR3276144 | Other | lineage3 | nl | ERR4815079 | RR-TB | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR978751 | Other | lineage4.8 | None | SRR7069137 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR7069251 | Other | lineage3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR10796615 | Other | lineage4.3.3;lineage4.9 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR4830888 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR502474 | RR-TB | lineage4.9 | None | ERR171135 | Other | lineage2.2.1 | za | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR2228910 | Other | lineage4.8 | None | SRR1180019 | Other | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR2229204 | Other | lineage4.8 | None | SRR1173421 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR3675509 | Other | lineage4.9 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR1183325 | Other | lineage4.9 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SRR3675513 | Other | lineage4.8 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR6044904 | Other | lineage3 | None | ERR978752 | Other | lineage4.8 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002988 | MDR-TB | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR1183126 | Other | lineage4.9 | None | SRR10869254 | Pre-XDR-TB | lineage2.2.1 | None | ERR911929 | Other | lineage4.8 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | SRR5485511 | RR-TB | lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1183412 | Other | lineage4.9 | None | ERR4818128 | Other | lineage4.1.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR037504 | Other | lineage4.9.1 | None | SRR18002906 | Pre-XDR-TB | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR1173185 | Other | lineage4.9 | None | ERR4800297 | Other | lineage4.1.1.3 | in | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | ERR4817915 | Other | lineage4.9 | None | SRR1181193 | Other | lineage4.9 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR6045952 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6046737 | Other | lineage4.9 | None | SAMN02567682 | Other | lineage4.6.1.1 | ug | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183682 | Other | lineage4.9 | None | SRR11342689 | Other | lineage4.1.2.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR10796566 | Other | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR978754 | RR-TB | lineage4.8 | None | ERR867569 | Other | lineage4.9 | None | SRR7069074 | Other | lineage3 | None | SRR1792024 | Other | La1.8.1 | None | ERR10796582 | Other | lineage4.3.4.1 | None | DRR184982 | Other | lineage2.2.1 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | SRR1180179 | Pre-XDR-TB | lineage3 | None | SRR5485510 | RR-TB | lineage4.9 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR18572454 | RR-TB | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR2228900 | Other | lineage4.8 | None | DRR185024 | Other | lineage2.2.2 | None | SRR1181587 | Other | lineage4.9 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR1182965 | Other | lineage4.9 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10796598 | Other | lineage4.9 | None | SRR1183681 | Other | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR1184329 | Other | lineage4.9 | None | ERR10796553 | Other | lineage4.9 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR270777 | HR-TB | lineage4.1.2 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR6197029 | Other | lineage4.7 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR4819383 | RR-TB | lineage4.9 | None | SAMN02585928 | Other | lineage4.1.1.3 | za | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | ERR2228965 | Other | lineage4.8 | None | SRR7069839 | Other | lineage4.8 | None | SRR1181130 | Other | lineage4.1.1.3 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR14801720 | Other | lineage4.8 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR5485522 | RR-TB | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023509 | MDR-TB | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1173770 | Other | lineage4.9 | None | ERR2228813 | Other | lineage4.8 | None | SRR6045384 | Other | lineage4.1.2.1 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1196478 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | SRR21469202 | Other | La1.7.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR9971029 | MDR-TB | lineage2.2.2 | None | ERR2027230 | Other | lineage4.2.2.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR1183333 | Other | lineage4.9 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR978761 | Other | lineage4.8 | None | SRR1173833 | Other | lineage4.9 | None | ERR4820586 | Other | lineage3 | gb | ERR10796588 | Other | lineage4.3.3 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR18002987 | Other | lineage2.2.1 | None | ERR2228890 | Other | lineage4.8;lineage4.9 | None | ERR4819622 | Other | lineage4.1.2.1 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR16156751 | Other | lineage4.9 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2229366 | Other | lineage4.8 | None | ERR10796560 | Other | lineage4.9 | None | ERR10796577 | Other | lineage4.9 | None | SRR19303907 | Other | lineage4.8 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR19303815 | Other | lineage4.8 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1180459 | Other | lineage4.9 | None | SRR1173834 | Other | lineage4.6.1.1 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR7069946 | Other | lineage4.8 | None | SRR1173281 | Other | lineage3 | None | ERR9117759 | Other | lineage3 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | ERR3283051 | Other | lineage4.9 | None | SRR15508556 | Other | lineage4.3.4.1 | None | ERR3468488 | Other | La1.8.1 | None | SRR1173719 | Other | lineage4.9 | None | SRR1181516 | Other | lineage4.9 | None | ERR2228899 | Other | lineage4.8 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | ERR9119120 | Other | lineage4.8 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR7069648 | Other | lineage4.6.2.2 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR2229325 | Other | lineage4.8 | dk | ERR10796589 | Other | lineage4.9 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR1183339 | Other | lineage4.9 | None | ERR2229148 | Other | lineage4.8 | dk | SRR4033549 | Other | lineage2.2.2 | None | SRR7070154 | Other | lineage4.4.1.1 | None | SRR3675389 | Other | lineage4.9 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR7131297 | Other | lineage1.2.1.2 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR978750 | RR-TB | lineage4.8 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349208 | MDR-TB | lineage2.2.1 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR1180669 | Other | lineage4.9 | None | ERR10796580 | Other | lineage4 | None | SRR1183244 | Other | lineage4.9 | None | ERR10796593 | Other | lineage4.3 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR2229147 | Other | lineage4.8 | None | ERR867571 | Other | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR1180446 | Other | lineage4.9 | None | DRR034348 | Other | lineage2.2.1 | None | SRR1180834 | Other | lineage4.9 | None | SRR6046159 | Other | lineage4.8.2 | None | SRR7645895 | Other | lineage2.2.1 | None | ERR2510804 | Other | lineage2.2.1 | None | SRR1792012 | Other | La1.8.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR978760 | RR-TB | lineage4.8 | None |
|---|
