Run ID: SRR6046737
Sample name:
Date: 04-04-2023 12:22:25
Number of reads: 20605
Percentage reads mapped: 1.89
Strain: lineage4.9
Drug-resistance: Other
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
lineage4.9 | Euro-American (H37Rv-like) | T1 | None | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|---|---|---|---|---|
rrs | 1472644 | n.799C>T | non_coding_transcript_exon_variant | 0.59 | streptomycin |
rrs | 1473247 | n.1402C>A | non_coding_transcript_exon_variant | 0.42 | kanamycin, capreomycin, aminoglycosides, amikacin |
rrs | 1473329 | n.1484G>T | non_coding_transcript_exon_variant | 0.38 | kanamycin, capreomycin, aminoglycosides, amikacin |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrB | 6331 | p.Glu364Asp | missense_variant | 1.0 |
gyrA | 6352 | c.-950C>G | upstream_gene_variant | 1.0 |
gyrA | 6358 | c.-944C>G | upstream_gene_variant | 1.0 |
gyrA | 6361 | c.-941G>A | upstream_gene_variant | 1.0 |
gyrA | 6362 | c.-940T>C | upstream_gene_variant | 1.0 |
gyrA | 6367 | c.-935C>G | upstream_gene_variant | 1.0 |
rpoB | 760430 | c.624T>C | synonymous_variant | 1.0 |
rpoB | 760434 | p.Val210Ile | missense_variant | 1.0 |
rpoB | 760460 | c.654G>T | synonymous_variant | 1.0 |
rpoB | 760472 | c.666C>T | synonymous_variant | 1.0 |
rpoB | 760478 | c.672C>T | synonymous_variant | 1.0 |
rpoB | 760481 | c.675G>T | synonymous_variant | 1.0 |
rpoB | 760484 | c.678A>G | synonymous_variant | 1.0 |
rpoB | 760487 | c.681G>C | synonymous_variant | 1.0 |
rpoB | 761528 | c.1722C>T | synonymous_variant | 1.0 |
rpoB | 761531 | c.1725C>G | synonymous_variant | 1.0 |
rpoB | 761534 | c.1728G>C | synonymous_variant | 1.0 |
rpoB | 761537 | c.1731C>G | synonymous_variant | 1.0 |
rpoB | 761552 | c.1746G>C | synonymous_variant | 1.0 |
rpoB | 761558 | c.1752C>T | synonymous_variant | 1.0 |
rpoB | 761564 | c.1758G>C | synonymous_variant | 1.0 |
rpoB | 761573 | c.1767C>G | synonymous_variant | 1.0 |
rpoB | 761612 | c.1806G>C | synonymous_variant | 1.0 |
rpoB | 761615 | c.1809A>G | synonymous_variant | 1.0 |
rpoB | 761633 | c.1827G>T | synonymous_variant | 1.0 |
rpoB | 762173 | p.Glu789Asp | missense_variant | 1.0 |
rpoB | 762185 | c.2379G>C | synonymous_variant | 1.0 |
rpoB | 762188 | c.2382C>T | synonymous_variant | 1.0 |
rpoB | 762194 | c.2388G>C | synonymous_variant | 1.0 |
rpoB | 762200 | c.2394C>T | synonymous_variant | 1.0 |
rpoB | 762221 | c.2415G>A | synonymous_variant | 1.0 |
rpoB | 762239 | c.2433G>A | synonymous_variant | 1.0 |
rpoB | 762245 | c.2439G>C | synonymous_variant | 1.0 |
rpoB | 762248 | c.2442G>C | synonymous_variant | 1.0 |
rpoB | 762251 | c.2445G>C | synonymous_variant | 1.0 |
rpoB | 762254 | c.2448T>C | synonymous_variant | 1.0 |
rpoB | 762257 | c.2451C>G | synonymous_variant | 1.0 |
rpoB | 762266 | c.2460T>C | synonymous_variant | 1.0 |
rpoB | 762281 | c.2475G>A | synonymous_variant | 1.0 |
rpoB | 762284 | c.2478G>T | synonymous_variant | 1.0 |
rpoB | 762293 | c.2487T>C | synonymous_variant | 1.0 |
rpoB | 762296 | c.2490G>C | synonymous_variant | 1.0 |
rpoB | 762297 | p.Leu831Met | missense_variant | 1.0 |
rpoB | 762305 | c.2499G>T | synonymous_variant | 1.0 |
rpoB | 762314 | c.2508C>T | synonymous_variant | 1.0 |
rpoB | 762318 | p.Ser838Thr | missense_variant | 1.0 |
rpoB | 762329 | c.2523G>C | synonymous_variant | 1.0 |
rpoB | 762336 | p.Ile844Val | missense_variant | 1.0 |
rpoB | 762341 | c.2535G>C | synonymous_variant | 1.0 |
rpoB | 762878 | p.Ile1024Met | missense_variant | 1.0 |
rpoB | 762879 | p.Met1025Leu | missense_variant | 1.0 |
rpoC | 762884 | c.-486G>A | upstream_gene_variant | 1.0 |
rpoC | 762899 | c.-471G>C | upstream_gene_variant | 1.0 |
rpoB | 762905 | p.Asp1033Glu | missense_variant | 1.0 |
rpoC | 762917 | c.-453C>G | upstream_gene_variant | 1.0 |
rpoC | 762929 | c.-441G>C | upstream_gene_variant | 1.0 |
rpoC | 762938 | c.-432G>C | upstream_gene_variant | 0.9 |
rpoC | 762959 | c.-411G>C | upstream_gene_variant | 0.94 |
rpoC | 762962 | c.-408C>T | upstream_gene_variant | 0.94 |
rpoC | 762971 | c.-399G>A | upstream_gene_variant | 1.0 |
rpoC | 762983 | c.-387C>T | upstream_gene_variant | 0.95 |
rpoC | 762989 | c.-381G>C | upstream_gene_variant | 1.0 |
rpoC | 762995 | c.-375G>T | upstream_gene_variant | 1.0 |
rpoB | 763002 | c.3197dupA | frameshift_variant | 1.0 |
rpoB | 763006 | c.3201delC | frameshift_variant | 1.0 |
rpoC | 763031 | c.-339T>C | upstream_gene_variant | 1.0 |
rpoC | 763040 | c.-330C>G | upstream_gene_variant | 1.0 |
rpoC | 763049 | c.-321G>A | upstream_gene_variant | 1.0 |
rpoC | 763052 | c.-318G>C | upstream_gene_variant | 1.0 |
rpoC | 763053 | c.-317T>C | upstream_gene_variant | 1.0 |
rpoC | 763064 | c.-306G>A | upstream_gene_variant | 1.0 |
rpoC | 763070 | c.-300T>C | upstream_gene_variant | 1.0 |
rpoB | 763074 | p.Thr1090Val | missense_variant | 1.0 |
rpoB | 763077 | p.Val1091Ile | missense_variant | 1.0 |
rpoC | 763085 | c.-285C>T | upstream_gene_variant | 1.0 |
rpoC | 763100 | c.-270G>A | upstream_gene_variant | 0.88 |
rpoC | 763103 | c.-267G>C | upstream_gene_variant | 0.87 |
rpoC | 763109 | c.-261C>G | upstream_gene_variant | 0.86 |
rpoC | 763115 | c.-255T>C | upstream_gene_variant | 1.0 |
rpoB | 763118 | p.Glu1104Asp | missense_variant | 0.82 |
rpoC | 763127 | c.-243G>C | upstream_gene_variant | 0.75 |
rpoB | 763130 | p.Glu1108Asp | missense_variant | 0.75 |
rpoC | 763136 | c.-234C>A | upstream_gene_variant | 1.0 |
rpoC | 763139 | c.-231C>T | upstream_gene_variant | 0.75 |
rpoC | 763142 | c.-228C>G | upstream_gene_variant | 0.75 |
rpoC | 763148 | c.-222G>C | upstream_gene_variant | 1.0 |
rpoC | 763158 | c.-212C>T | upstream_gene_variant | 1.0 |
rpoC | 763169 | c.-201A>G | upstream_gene_variant | 1.0 |
rpoC | 763456 | c.87A>G | synonymous_variant | 1.0 |
rpoC | 763462 | c.93G>C | synonymous_variant | 1.0 |
rpoC | 763468 | c.99G>C | synonymous_variant | 1.0 |
rpoC | 763483 | c.114G>C | synonymous_variant | 1.0 |
rpoC | 763486 | c.117T>C | synonymous_variant | 1.0 |
rpoC | 763489 | c.120G>A | synonymous_variant | 1.0 |
rpoC | 763492 | c.123G>C | synonymous_variant | 1.0 |
rpoC | 763516 | c.147G>A | synonymous_variant | 1.0 |
rpoC | 763517 | p.Lys50Arg | missense_variant | 1.0 |
rpoC | 763531 | c.162G>A | synonymous_variant | 1.0 |
rpoC | 763534 | c.165T>C | synonymous_variant | 1.0 |
rpoC | 763549 | c.180C>T | synonymous_variant | 1.0 |
rpoC | 763550 | p.Tyr61Ala | missense_variant | 1.0 |
rpoC | 763558 | c.189C>T | synonymous_variant | 1.0 |
rpoC | 763561 | c.192G>A | synonymous_variant | 1.0 |
rpoC | 763570 | c.201G>A | synonymous_variant | 1.0 |
rpoC | 763573 | c.204G>C | synonymous_variant | 1.0 |
rpoC | 763578 | p.Phe70Tyr | missense_variant | 1.0 |
rpoC | 763589 | p.Ile74Val | missense_variant | 1.0 |
rpoC | 763594 | c.225C>T | synonymous_variant | 1.0 |
rpoC | 763597 | c.228G>A | synonymous_variant | 1.0 |
rpoC | 763603 | c.234C>T | synonymous_variant | 1.0 |
rpoC | 763609 | c.240C>G | synonymous_variant | 1.0 |
rpoC | 763612 | c.243G>A | synonymous_variant | 1.0 |
rpoC | 763619 | p.Arg84Lys | missense_variant | 1.0 |
rpoC | 763622 | p.Ala85Ser | missense_variant | 1.0 |
rpoC | 763630 | c.261G>C | synonymous_variant | 1.0 |
rpoC | 763633 | c.264T>C | synonymous_variant | 1.0 |
rpoC | 763642 | c.273G>C | synonymous_variant | 1.0 |
rpoC | 763660 | c.291T>G | synonymous_variant | 1.0 |
rpoC | 763696 | c.327T>C | synonymous_variant | 1.0 |
rpoC | 763702 | c.333C>G | synonymous_variant | 0.29 |
rpoC | 763705 | c.336G>A | synonymous_variant | 0.71 |
rpoC | 763708 | c.339G>C | synonymous_variant | 1.0 |
rpoC | 763714 | c.345G>C | synonymous_variant | 0.29 |
rpoC | 763717 | c.348T>C | synonymous_variant | 1.0 |
rpoC | 763723 | c.354G>C | synonymous_variant | 0.29 |
rpoC | 763729 | c.360G>C | synonymous_variant | 0.6 |
rpoC | 763732 | c.363C>G | synonymous_variant | 1.0 |
rpoC | 763735 | c.366G>C | synonymous_variant | 0.4 |
rpoC | 763738 | c.369G>A | synonymous_variant | 0.6 |
rpoC | 763741 | c.372C>T | synonymous_variant | 0.6 |
rpoC | 763744 | c.375G>C | synonymous_variant | 0.4 |
rpoC | 763747 | c.378G>A | synonymous_variant | 0.6 |
rpoC | 763765 | c.396T>C | synonymous_variant | 1.0 |
rpoC | 763768 | c.399C>G | synonymous_variant | 1.0 |
rpoC | 763769 | p.Tyr134Asn | missense_variant | 1.0 |
rpoC | 763772 | p.Val135Ile | missense_variant | 1.0 |
rpoC | 763786 | c.417C>G | synonymous_variant | 1.0 |
rpoC | 764605 | c.1236G>C | synonymous_variant | 1.0 |
rpoC | 764611 | c.1242G>T | synonymous_variant | 1.0 |
rpoC | 764623 | c.1254C>G | synonymous_variant | 1.0 |
rpoC | 764626 | c.1257C>T | synonymous_variant | 1.0 |
rpoC | 764644 | c.1275G>C | synonymous_variant | 1.0 |
rpoC | 764650 | c.1281G>T | synonymous_variant | 1.0 |
rpoC | 764656 | c.1287C>G | synonymous_variant | 1.0 |
rpoC | 764659 | c.1290C>T | synonymous_variant | 1.0 |
rpoC | 764660 | p.Val431Ile | missense_variant | 1.0 |
rpoC | 764675 | c.1306_1308delCTCinsTTG | synonymous_variant | 1.0 |
rpoC | 764680 | c.1311G>A | synonymous_variant | 1.0 |
rpoC | 764701 | c.1332C>G | synonymous_variant | 1.0 |
rpoC | 764707 | c.1338G>C | synonymous_variant | 1.0 |
rpoC | 764714 | c.1345C>T | synonymous_variant | 1.0 |
rpoC | 764731 | c.1362G>A | synonymous_variant | 1.0 |
rpoC | 764737 | c.1368G>C | synonymous_variant | 1.0 |
rpoC | 764746 | c.1377G>C | synonymous_variant | 1.0 |
rpoC | 766288 | c.2919C>T | synonymous_variant | 1.0 |
rpoC | 766309 | c.2940G>A | synonymous_variant | 1.0 |
rpoC | 766312 | c.2943T>C | synonymous_variant | 1.0 |
rpoC | 766328 | p.Lys987Gln | missense_variant | 1.0 |
rpoC | 766331 | p.Leu988Lys | missense_variant | 1.0 |
rpoC | 766336 | c.2967C>G | synonymous_variant | 1.0 |
rpoC | 766345 | c.2976T>A | synonymous_variant | 1.0 |
rpoC | 766357 | c.2988C>T | synonymous_variant | 1.0 |
rpoC | 766363 | c.2994G>T | synonymous_variant | 1.0 |
rpoC | 766369 | c.3000C>G | synonymous_variant | 1.0 |
rpoC | 766378 | c.3009C>T | synonymous_variant | 1.0 |
rpoC | 766381 | c.3012C>T | synonymous_variant | 1.0 |
rpoC | 766384 | c.3015A>G | synonymous_variant | 1.0 |
rpoC | 766387 | c.3018C>T | synonymous_variant | 1.0 |
rpoC | 766390 | c.3021C>T | synonymous_variant | 1.0 |
rpoC | 766393 | c.3024C>G | synonymous_variant | 1.0 |
rpoC | 766408 | c.3039C>T | synonymous_variant | 1.0 |
rpoC | 766411 | c.3042C>G | synonymous_variant | 1.0 |
rpoC | 766420 | c.3051G>A | synonymous_variant | 1.0 |
rpoC | 766426 | c.3057C>T | synonymous_variant | 1.0 |
rpoC | 767035 | c.3666G>C | synonymous_variant | 1.0 |
rpoC | 767062 | c.3693C>T | synonymous_variant | 1.0 |
rpoC | 767065 | c.3696G>C | synonymous_variant | 1.0 |
rpoC | 767087 | p.Cys1240Lys | missense_variant | 1.0 |
rpoC | 767092 | c.3723C>G | synonymous_variant | 1.0 |
rpoC | 767093 | c.3724_3725delAGinsTC | synonymous_variant | 1.0 |
rpoC | 767106 | p.Asn1246Ile | missense_variant | 1.0 |
rpoC | 767119 | c.3750A>G | synonymous_variant | 1.0 |
rpoC | 767134 | c.3765C>T | synonymous_variant | 1.0 |
rpoC | 767140 | c.3771G>C | synonymous_variant | 1.0 |
rpoC | 767143 | c.3774C>T | synonymous_variant | 1.0 |
rpsL | 781766 | c.207C>T | synonymous_variant | 1.0 |
rpsL | 781793 | c.234G>C | synonymous_variant | 1.0 |
rpsL | 781802 | c.243G>C | synonymous_variant | 1.0 |
rpsL | 781805 | c.246G>T | synonymous_variant | 1.0 |
rpsL | 781811 | c.252C>T | synonymous_variant | 1.0 |
rpsL | 781817 | c.258G>T | synonymous_variant | 1.0 |
rplC | 800672 | c.-137G>T | upstream_gene_variant | 1.0 |
rplC | 800693 | c.-116A>G | upstream_gene_variant | 1.0 |
rplC | 800702 | c.-107G>C | upstream_gene_variant | 0.83 |
rplC | 800703 | c.-106T>C | upstream_gene_variant | 1.0 |
rplC | 800720 | c.-89T>C | upstream_gene_variant | 1.0 |
rplC | 800726 | c.-83G>C | upstream_gene_variant | 0.8 |
rplC | 800744 | c.-65G>A | upstream_gene_variant | 1.0 |
rplC | 800747 | c.-62C>T | upstream_gene_variant | 1.0 |
rplC | 800768 | c.-41C>A | upstream_gene_variant | 1.0 |
rplC | 800780 | c.-29C>G | upstream_gene_variant | 1.0 |
rplC | 800786 | c.-23C>T | upstream_gene_variant | 1.0 |
fbiC | 1304784 | c.1854T>C | synonymous_variant | 1.0 |
fbiC | 1304787 | c.1857T>C | synonymous_variant | 1.0 |
fbiC | 1304790 | c.1860C>G | synonymous_variant | 1.0 |
fbiC | 1304808 | c.1878C>G | synonymous_variant | 1.0 |
fbiC | 1304811 | c.1881C>G | synonymous_variant | 1.0 |
fbiC | 1304817 | c.1887T>C | synonymous_variant | 1.0 |
fbiC | 1304829 | c.1899T>C | synonymous_variant | 1.0 |
fbiC | 1304832 | c.1902C>G | synonymous_variant | 1.0 |
fbiC | 1304853 | c.1923C>G | synonymous_variant | 1.0 |
fbiC | 1304856 | c.1926C>G | synonymous_variant | 1.0 |
fbiC | 1304872 | c.1942_1944delAGCinsTCG | synonymous_variant | 1.0 |
fbiC | 1304877 | c.1947T>C | synonymous_variant | 1.0 |
fbiC | 1304878 | c.1948_1950delCGCinsAGG | synonymous_variant | 1.0 |
fbiC | 1304893 | p.Gly655Ser | missense_variant | 1.0 |
rrs | 1471922 | n.78delT | non_coding_transcript_exon_variant | 1.0 |
rrs | 1471925 | n.80T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1471928 | n.83T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1471936 | n.91A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1471979 | n.134T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1471980 | n.135G>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1471981 | n.136C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1471986 | n.141C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472017 | n.172C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472150 | n.305T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472151 | n.306C>A | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472160 | n.315C>T | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472203 | n.358G>A | non_coding_transcript_exon_variant | 0.4 |
rrs | 1472344 | n.499C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472426 | n.581T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472435 | n.590T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472436 | n.591G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472439 | n.594C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472446 | n.601T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472448 | n.603T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472450 | n.605A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472451 | n.606C>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472461 | n.616G>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472462 | n.617T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472464 | n.619A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472466 | n.621C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472467 | n.622G>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472468 | n.623T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472471 | n.626G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472474 | n.629C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472484 | n.639_640insT | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472489 | n.644A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472498 | n.653C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472530 | n.685G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472537 | n.692C>T | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472545 | n.700A>T | non_coding_transcript_exon_variant | 0.25 |
rrs | 1472566 | n.721G>A | non_coding_transcript_exon_variant | 0.4 |
rrs | 1472579 | n.734G>T | non_coding_transcript_exon_variant | 0.31 |
rrs | 1472581 | n.736A>T | non_coding_transcript_exon_variant | 0.56 |
rrs | 1472598 | n.753A>C | non_coding_transcript_exon_variant | 0.28 |
rrs | 1472607 | n.762G>A | non_coding_transcript_exon_variant | 0.63 |
rrs | 1472612 | n.767G>T | non_coding_transcript_exon_variant | 0.4 |
rrs | 1472655 | n.810G>A | non_coding_transcript_exon_variant | 0.41 |
rrs | 1472660 | n.815T>C | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472661 | n.816A>G | non_coding_transcript_exon_variant | 0.74 |
rrs | 1472673 | n.828T>G | non_coding_transcript_exon_variant | 0.3 |
rrs | 1472675 | n.830T>C | non_coding_transcript_exon_variant | 0.35 |
rrs | 1472697 | n.852T>C | non_coding_transcript_exon_variant | 0.28 |
rrs | 1472713 | n.868T>C | non_coding_transcript_exon_variant | 0.68 |
rrs | 1472714 | n.869A>G | non_coding_transcript_exon_variant | 0.57 |
rrs | 1472790 | n.945T>C | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472824 | n.979T>A | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472825 | n.980G>A | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472828 | n.983T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472884 | n.1039G>T | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472895 | n.1050C>T | non_coding_transcript_exon_variant | 0.75 |
rrs | 1472955 | n.1111T>C | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472958 | n.1113A>G | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472974 | n.1129A>T | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472977 | n.1133dupT | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472988 | n.1143T>C | non_coding_transcript_exon_variant | 0.56 |
rrs | 1472990 | n.1145A>G | non_coding_transcript_exon_variant | 0.92 |
rrs | 1472996 | n.1151T>C | non_coding_transcript_exon_variant | 0.29 |
rrs | 1473005 | n.1160C>T | non_coding_transcript_exon_variant | 0.71 |
rrs | 1473035 | n.1190G>A | non_coding_transcript_exon_variant | 0.8 |
rrs | 1473066 | n.1221A>G | non_coding_transcript_exon_variant | 0.36 |
rrs | 1473081 | n.1236C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473088 | n.1243A>G | non_coding_transcript_exon_variant | 0.6 |
rrs | 1473089 | n.1244A>C | non_coding_transcript_exon_variant | 0.4 |
rrs | 1473091 | n.1246G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473093 | n.1248C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473100 | n.1255G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473110 | n.1265T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473112 | n.1267A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473115 | n.1270G>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473120 | n.1275C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473121 | n.1276T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473122 | n.1277T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473123 | n.1278A>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473130 | n.1285G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473148 | n.1303G>A | non_coding_transcript_exon_variant | 0.71 |
rrs | 1473163 | n.1318C>T | non_coding_transcript_exon_variant | 0.71 |
rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473202 | n.1357C>T | non_coding_transcript_exon_variant | 0.62 |
rrs | 1473252 | n.1407T>C | non_coding_transcript_exon_variant | 0.42 |
rrs | 1473259 | n.1414C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473270 | n.1425G>A | non_coding_transcript_exon_variant | 0.42 |
rrs | 1473276 | n.1431A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473292 | n.1447G>T | non_coding_transcript_exon_variant | 0.62 |
rrs | 1473293 | n.1448G>T | non_coding_transcript_exon_variant | 0.62 |
rrs | 1473301 | n.1456T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473305 | n.1460G>T | non_coding_transcript_exon_variant | 0.38 |
rrs | 1473316 | n.1471C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474351 | n.694G>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474353 | n.696A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474355 | n.698A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474356 | n.699T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474362 | n.705A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474487 | n.830G>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474495 | n.838G>A | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474496 | n.839C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474497 | n.840G>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474506 | n.849C>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474507 | n.850G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474508 | n.851C>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474517 | n.860C>G | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474527 | n.870T>G | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474537 | n.880G>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474542 | n.885A>C | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474552 | n.895C>T | non_coding_transcript_exon_variant | 0.83 |
rrl | 1474584 | n.927C>T | non_coding_transcript_exon_variant | 0.38 |
rrl | 1474615 | n.958A>G | non_coding_transcript_exon_variant | 0.33 |
rrl | 1474677 | n.1020A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474709 | n.1052G>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474734 | n.1077G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474749 | n.1092C>T | non_coding_transcript_exon_variant | 0.43 |
rrl | 1474760 | n.1103A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474777 | n.1120T>C | non_coding_transcript_exon_variant | 0.22 |
rrl | 1474779 | n.1122G>A | non_coding_transcript_exon_variant | 0.43 |
rrl | 1474782 | n.1125G>A | non_coding_transcript_exon_variant | 0.43 |
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474798 | n.1141C>T | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474803 | n.1146G>A | non_coding_transcript_exon_variant | 0.58 |
rrl | 1474812 | n.1155G>A | non_coding_transcript_exon_variant | 0.58 |
rrl | 1474823 | n.1166C>G | non_coding_transcript_exon_variant | 0.83 |
rrl | 1474824 | n.1167A>G | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474825 | n.1168G>A | non_coding_transcript_exon_variant | 0.58 |
rrl | 1474830 | n.1173A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474864 | n.1207C>T | non_coding_transcript_exon_variant | 0.79 |
rrl | 1474896 | n.1239A>G | non_coding_transcript_exon_variant | 0.64 |
rrl | 1474901 | n.1244A>G | non_coding_transcript_exon_variant | 0.78 |
rrl | 1474913 | n.1256T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474921 | n.1264C>T | non_coding_transcript_exon_variant | 0.78 |
rrl | 1474928 | n.1271C>T | non_coding_transcript_exon_variant | 0.71 |
rrl | 1474932 | n.1275C>T | non_coding_transcript_exon_variant | 0.71 |
rrl | 1474933 | n.1276A>G | non_coding_transcript_exon_variant | 0.71 |
rrl | 1475696 | n.2039T>A | non_coding_transcript_exon_variant | 0.75 |
rrl | 1475703 | n.2046A>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1475707 | n.2050T>G | non_coding_transcript_exon_variant | 0.6 |
rrl | 1475713 | n.2056C>T | non_coding_transcript_exon_variant | 0.43 |
rrl | 1475715 | n.2058G>C | non_coding_transcript_exon_variant | 0.43 |
rrl | 1475735 | n.2078T>C | non_coding_transcript_exon_variant | 0.33 |
rrl | 1475751 | n.2094C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1475753 | n.2096C>T | non_coding_transcript_exon_variant | 0.43 |
rrl | 1475756 | n.2099T>C | non_coding_transcript_exon_variant | 0.57 |
rrl | 1475758 | n.2101A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475768 | n.2111G>T | non_coding_transcript_exon_variant | 0.43 |
rrl | 1475769 | n.2112T>C | non_coding_transcript_exon_variant | 0.86 |
rrl | 1475777 | n.2120A>T | non_coding_transcript_exon_variant | 0.57 |
rrl | 1475783 | n.2126T>C | non_coding_transcript_exon_variant | 0.38 |
rrl | 1475791 | n.2134A>G | non_coding_transcript_exon_variant | 0.3 |
rrl | 1475869 | n.2212C>A | non_coding_transcript_exon_variant | 0.36 |
rrl | 1475881 | n.2224T>C | non_coding_transcript_exon_variant | 0.64 |
rrl | 1475883 | n.2226A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475884 | n.2227A>G | non_coding_transcript_exon_variant | 0.64 |
rrl | 1475897 | n.2240T>C | non_coding_transcript_exon_variant | 0.53 |
rrl | 1475898 | n.2241A>G | non_coding_transcript_exon_variant | 0.53 |
rrl | 1475899 | n.2242G>A | non_coding_transcript_exon_variant | 0.53 |
rrl | 1475900 | n.2243A>G | non_coding_transcript_exon_variant | 0.71 |
rrl | 1475902 | n.2245T>C | non_coding_transcript_exon_variant | 0.47 |
rrl | 1475916 | n.2259C>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475937 | n.2280A>T | non_coding_transcript_exon_variant | 0.38 |
rrl | 1475943 | n.2286G>A | non_coding_transcript_exon_variant | 0.53 |
rrl | 1475952 | n.2295A>G | non_coding_transcript_exon_variant | 0.41 |
rrl | 1475970 | n.2313C>T | non_coding_transcript_exon_variant | 0.38 |
rrl | 1475975 | n.2318C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475977 | n.2320A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475978 | n.2321C>T | non_coding_transcript_exon_variant | 0.4 |
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475993 | n.2336C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475997 | n.2340A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476001 | n.2344T>C | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476030 | n.2373A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476032 | n.2375C>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476033 | n.2376T>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476034 | n.2377C>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476035 | n.2378G>C | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476040 | n.2383C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476044 | n.2387T>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476045 | n.2388G>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476046 | n.2389G>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476047 | n.2390G>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476049 | n.2392C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476060 | n.2403T>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476085 | n.2428G>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476091 | n.2434_2435insC | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476099 | n.2442A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476100 | n.2443A>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476103 | n.2446C>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476105 | n.2450delA | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476110 | n.2453G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476113 | n.2456T>G | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476115 | n.2458T>C | non_coding_transcript_exon_variant | 0.33 |
rrl | 1476130 | n.2473G>A | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476131 | n.2474C>T | non_coding_transcript_exon_variant | 0.7 |
rrl | 1476141 | n.2484A>G | non_coding_transcript_exon_variant | 0.45 |
rrl | 1476153 | n.2496T>C | non_coding_transcript_exon_variant | 0.45 |
rrl | 1476160 | n.2503T>C | non_coding_transcript_exon_variant | 0.3 |
rrl | 1476164 | n.2507A>G | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476165 | n.2508T>A | non_coding_transcript_exon_variant | 0.43 |
rrl | 1476187 | n.2530T>C | non_coding_transcript_exon_variant | 0.3 |
rrl | 1476194 | n.2537A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476200 | n.2543A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476201 | n.2544C>T | non_coding_transcript_exon_variant | 0.62 |
rrl | 1476207 | n.2550T>C | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476212 | n.2555T>C | non_coding_transcript_exon_variant | 0.33 |
rrl | 1476214 | n.2557G>C | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.6 |
rrl | 1476225 | n.2568T>G | non_coding_transcript_exon_variant | 0.4 |
rrl | 1476229 | n.2572C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476245 | n.2588C>T | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476250 | n.2593C>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476251 | n.2594T>C | non_coding_transcript_exon_variant | 0.57 |
rrl | 1476252 | n.2595T>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476256 | n.2599A>G | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476257 | n.2600G>C | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476280 | n.2623A>C | non_coding_transcript_exon_variant | 0.71 |
rrl | 1476293 | n.2636C>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476294 | n.2637A>G | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476295 | n.2638C>G | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476296 | n.2639C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476297 | n.2640C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476301 | n.2644A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476302 | n.2645G>A | non_coding_transcript_exon_variant | 0.6 |
rrl | 1476307 | n.2650A>T | non_coding_transcript_exon_variant | 0.4 |
rrl | 1476309 | n.2652G>C | non_coding_transcript_exon_variant | 0.4 |
rrl | 1476311 | n.2654G>C | non_coding_transcript_exon_variant | 0.6 |
rrl | 1476312 | n.2655T>C | non_coding_transcript_exon_variant | 0.6 |
rrl | 1476313 | n.2656G>A | non_coding_transcript_exon_variant | 0.6 |
rrl | 1476332 | n.2675G>C | non_coding_transcript_exon_variant | 0.62 |
rrl | 1476338 | n.2681C>T | non_coding_transcript_exon_variant | 0.78 |
rrl | 1476353 | n.2696G>T | non_coding_transcript_exon_variant | 0.72 |
rrl | 1476358 | n.2701T>C | non_coding_transcript_exon_variant | 0.72 |
rrl | 1476369 | n.2712C>T | non_coding_transcript_exon_variant | 0.71 |
rrl | 1476372 | n.2715T>C | non_coding_transcript_exon_variant | 0.71 |
rrl | 1476382 | n.2725A>G | non_coding_transcript_exon_variant | 0.7 |
rrl | 1476383 | n.2726T>A | non_coding_transcript_exon_variant | 0.7 |
rrl | 1476425 | n.2768G>T | non_coding_transcript_exon_variant | 0.68 |
rrl | 1476428 | n.2771C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476429 | n.2772A>C | non_coding_transcript_exon_variant | 0.89 |
rrl | 1476481 | n.2824T>C | non_coding_transcript_exon_variant | 0.88 |
rrl | 1476506 | n.2849T>C | non_coding_transcript_exon_variant | 0.71 |
rrl | 1476515 | n.2858C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476530 | n.2873C>T | non_coding_transcript_exon_variant | 0.36 |
rrl | 1476536 | n.2879G>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476539 | n.2882A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476540 | n.2883C>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476547 | n.2890C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476572 | n.2915G>C | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476573 | n.2916A>T | non_coding_transcript_exon_variant | 0.6 |
rrl | 1476584 | n.2927C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476585 | n.2928A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476594 | n.2937C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476597 | n.2940G>T | non_coding_transcript_exon_variant | 0.67 |
rpsA | 1834189 | c.648G>C | synonymous_variant | 1.0 |
rpsA | 1834195 | c.654G>C | synonymous_variant | 1.0 |
rpsA | 1834213 | c.672G>A | synonymous_variant | 1.0 |
rpsA | 1834225 | c.684C>T | synonymous_variant | 1.0 |
rpsA | 1834231 | c.690T>C | synonymous_variant | 1.0 |
rpsA | 1834234 | c.693G>A | synonymous_variant | 1.0 |
rpsA | 1834246 | c.705G>T | synonymous_variant | 1.0 |
rpsA | 1834249 | c.708T>C | synonymous_variant | 1.0 |
rpsA | 1834261 | c.720A>G | synonymous_variant | 1.0 |
rpsA | 1834264 | c.723G>C | synonymous_variant | 1.0 |
rpsA | 1834294 | c.753G>C | synonymous_variant | 1.0 |
rpsA | 1834298 | p.Gln253Ala | missense_variant | 1.0 |
rpsA | 1834306 | c.765T>C | synonymous_variant | 1.0 |
rpsA | 1834327 | c.786G>C | synonymous_variant | 1.0 |
rpsA | 1834333 | c.792C>T | synonymous_variant | 1.0 |
rpsA | 1834345 | c.804C>T | synonymous_variant | 1.0 |
rpsA | 1834348 | c.807T>C | synonymous_variant | 1.0 |
rpsA | 1834351 | c.810G>A | synonymous_variant | 1.0 |
rpsA | 1834354 | c.813G>C | synonymous_variant | 1.0 |
rpsA | 1834357 | c.816T>C | synonymous_variant | 1.0 |
rpsA | 1834360 | c.819G>C | synonymous_variant | 1.0 |
rpsA | 1834361 | c.820T>C | synonymous_variant | 1.0 |
rpsA | 1834366 | c.825A>G | synonymous_variant | 1.0 |
rpsA | 1834375 | c.834G>C | synonymous_variant | 1.0 |
rpsA | 1834378 | c.837T>C | synonymous_variant | 1.0 |
rpsA | 1834387 | c.846C>T | synonymous_variant | 1.0 |
rpsA | 1834451 | c.910T>C | synonymous_variant | 1.0 |
rpsA | 1834468 | c.927A>G | synonymous_variant | 1.0 |
rpsA | 1834480 | c.939C>T | synonymous_variant | 1.0 |
rpsA | 1834483 | c.942G>A | synonymous_variant | 1.0 |
rpsA | 1834498 | c.957C>T | synonymous_variant | 1.0 |
rpsA | 1834504 | c.963G>C | synonymous_variant | 1.0 |
embC | 4241567 | p.Ile569Val | missense_variant | 1.0 |
embC | 4241572 | c.1710C>G | synonymous_variant | 1.0 |
embC | 4241578 | c.1716G>C | synonymous_variant | 1.0 |
embC | 4241584 | c.1722T>C | synonymous_variant | 1.0 |
embC | 4241587 | c.1725C>G | synonymous_variant | 1.0 |
embC | 4241591 | p.Leu577Val | missense_variant | 1.0 |
embC | 4241611 | c.1749G>C | synonymous_variant | 1.0 |
embC | 4241614 | c.1752A>C | synonymous_variant | 1.0 |
embC | 4241626 | c.1764T>C | synonymous_variant | 1.0 |