lineage | Count |
---|---|
lineage4.9 | 29 |
La1.2 | 1 |
lineage4.6.5 | 2 |
lineage4.9.1 | 1 |
lineage4.3.2.1 | 1 |
lineage4.8 | 6 |
La1.4 | 1 |
lineage1.2.2.2 | 2 |
lineage1.2.1.2 | 1 |
5 | |
lineage3 | 5 |
lineage4 | 4 |
lineage4.1.2.1 | 2 |
lineage3.1.2.1 | 1 |
lineage4.3.3 | 4 |
lineage1.1.1 | 2 |
lineage1 | 1 |
lineage1.1.2 | 1 |
lineage4.4.1.1 | 2 |
lineage6.3.1 | 1 |
lineage4.3 | 1 |
lineage4.1.1.3.1 | 2 |
lineage4;lineage3 | 1 |
lineage4.8.2 | 1 |
lineage3.1.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage1.1.3.1 | 1 |
lineage4.7 | 1 |
lineage2.2.1 | 2 |
lineage4.2.2.2 | 1 |
La1.8.1 | 2 |
lineage4.3.4.1 | 1 |
lineage4.3.4 | 1 |
lineage4.4.1.2 | 1 |
spoligotype | Count |
---|---|
None | 89 |
ID | Drug resistance | Lineage | Country iso2 | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | SRR1172987 | HR-TB | lineage4.9 | None | ERR037504 | Other | lineage4.9.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR16278274 | Other | La1.4 | None | ERR4815517 | Other | lineage1.2.2.2 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4815310 | Other | None | ERR4815556 | RR-TB | lineage3 | None | ERR4815550 | Other | lineage4 | None | ERR4814976 | Other | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4815909 | Other | lineage4.8 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4817060 | RR-TB | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816322 | Other | lineage4.9 | None | ERR4817069 | RR-TB | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR4818831 | Other | lineage3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR4817584 | MDR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4820324 | Other | lineage4 | None | ERR4819217 | Other | lineage1.2.2.2 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4821409 | Other | lineage4.8 | None | ERR4819910 | Other | lineage4.9 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4820107 | RR-TB | None | ERR4821214 | RR-TB | None | ERR4821288 | Other | lineage4.7 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6046291 | Other | lineage3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046737 | Other | lineage4.9 | None | SRR6046541 | Other | lineage4.9 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR3283008 | Other | lineage4.9 | None | ERR10796634 | Other | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None |
---|