Rv0668 - c.165T>C


Drug resistance types
50 Sensitive 89 RR-TB 34 HR-TB 54 MDR-TB 29 Pre-XDR-TB 0 XDR-TB 99 Other
lineage Counts
lineage Count
lineage3.1.2.1 2
lineage3 24
lineage6 1
lineage1 1
lineage4.9 114
lineage4.8 29
lineage4.4.1.1 3
lineage4.1.2.1 11
lineage4.1.1.3.1 3
lineage4.3.3 6
lineage4.8.2 1
lineage1.2.2.2 1
lineage4.3.4.2.1 8
lineage2.2.1 38
lineage4 20
lineage4.3.4.2 2
lineage3.1.1 3
lineage1.1.3.1 3
10
La3 1
lineage4.1.1 2
lineage4.1.1.3 4
lineage3.1.2 2
lineage4.2.2.2 1
lineage4.6.2.2 2
lineage4.1.2.1.1 1
lineage4.1 1
lineage4.1.2 1
lineage4.3.4.1 1
lineage5.1.4 1
lineage4.3 1
lineage4.3.2.1 3
lineage4.7 2
lineage4.2.1 7
lineage4.8.1 1
lineage4.6.1.1 1
lineage4.9;lineage4.3.4 1
La1.8.1 3
La1.7.X-unk4 1
La1.2 1
La1.3 2
lineage4.9;La1.3 1
lineage2.2.2 4
lineage1.1.2 1
lineage4.5;lineage2.2.1 1
lineage4.6.5 2
lineage1.1.1.1 1
lineage4.6.1.2 5
lineage4.4.1.1;lineage4.1.2.1 1
La1.6 1
lineage4.4.1.1.1 2
lineage4.8;lineage4.3.3 1
lineage4.9;lineage2.2 1
lineage2.2 1
lineage2 1
lineage4.2.2.1 2
La1.4 1
lineage4.4 1
lineage2.2.1.1 1
lineage1.2.1.2 1
lineage1.2.2 1
lineage5 1
lineage3.1 1
lineage4.5 2
lineage4;lineage2 1
spoligotype Counts
spoligotype Count
None 355
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4819011 Other lineage3.1.2.1 None
ERR4819017 RR-TB lineage3 None
ERR4818787 MDR-TB lineage6 None
ERR4818126 RR-TB lineage1 None
ERR4818149 Other lineage4.9 None
SAMEA3501063 RR-TB lineage4.8 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4818393 RR-TB lineage3 None
ERR4818904 Other lineage4.8 None
ERR4818507 RR-TB lineage4.1.2.1 None
SRR5007168 RR-TB lineage4.9 None
ERR2509886 RR-TB lineage3 None
ERR4818536 Other lineage4.9 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007165 MDR-TB lineage3 None
ERR4818583 Other lineage4.3.3 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007169 RR-TB lineage4.8.2 None
ERR4819217 Other lineage1.2.2.2 None
SRR5007170 RR-TB lineage4.9 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR4817584 MDR-TB lineage3 None
ERR4818624 Other lineage4.3.4.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR2513682 Sensitive lineage3 None
SAMEA3501067 RR-TB lineage4.8 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4819198 Other lineage2.2.1 None
ERR4820266 RR-TB lineage3 None
ERR4820284 Other lineage4.9 None
ERR4819357 Other lineage4.9 None
ERR4819462 Other lineage4 None
ERR4819383 RR-TB lineage4.9 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4820746 RR-TB lineage3 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR4819863 RR-TB lineage4.9 None
ERR4819772 RR-TB lineage1.1.3.1 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR4819933 Other lineage4.9 None
ERR4819876 HR-TB lineage4.3.4.2.1 None
ERR4819910 Other lineage4.9 None
SAMEA3501070 RR-TB lineage4.8 None
ERR4820833 HR-TB None
ERR4820192 Other La3 None
ERR4820030 Other lineage4.9 None
ERR4820107 RR-TB None
ERR4821796 Other lineage4.1.1 None
ERR4821811 RR-TB lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
ERR4821057 HR-TB lineage4 None
ERR4821704 MDR-TB lineage4.3.3 None
SAMEA3501046 RR-TB lineage4.8 None
ERR4821119 Other lineage4.4.1.1 None
SRR6046117 RR-TB lineage4.9 None
ERR2660499 Sensitive lineage4.1.1.3 None
ERR4821172 RR-TB lineage4.9 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4822104 RR-TB lineage3 None
ERR4821550 Other lineage2.2.1 None
ERR4822261 RR-TB lineage2.2.1 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6046141 Other lineage4.9 None
SRR6045683 Other lineage3.1.2 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6045832 HR-TB lineage4.9 None
SRR6046737 Other lineage4.9 None
SRR6046385 Other lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
SRR6044952 RR-TB lineage4.9 None
SRR6045263 Sensitive lineage4.9 None
ERR502472 Other lineage4.6.2.2 None
ERR502470 RR-TB lineage4.9 None
ERR323037 HR-TB lineage4 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR4831529 Pre-XDR-TB lineage2.2.1 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
ERR4972574 MDR-TB lineage4.1.2.1.1 None
ERR502481 Pre-XDR-TB lineage4.9 None
SRR6982141 RR-TB lineage4.3.3 None
SRR6789624 MDR-TB lineage4.1 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR9970980 Other lineage4.1.2 None
ERR3275996 HR-TB lineage4.3.4.1 nl
ERR502507 Sensitive lineage5.1.4 None
ERR3275941 RR-TB lineage4.3 nl
ERR019855 Other lineage3 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7645899 RR-TB lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR7645927 Other lineage4.8 None
SRR7645928 RR-TB lineage4.7 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR9971046 MDR-TB lineage4.8 None
SRR9971065 RR-TB lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR7755655 Other lineage4.1.2.1 None
SRR7755657 Other lineage4.8 None
SRR9971113 Other lineage2.2.1 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR9971168 Other lineage4.3.2.1 None
DRR184629 Other lineage2.2.1 None
ERR017781 Other lineage3 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR7585400 MDR-TB lineage3 None
ERR10762275 MDR-TB lineage4.2.1 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1063855 Other lineage4 None
ERR036207 Other lineage4.9 None
ERR10796565 RR-TB lineage4.9 None
ERR10796566 Other lineage4.9;lineage4.3.4 None
ERR10762297 MDR-TB lineage4.2.1 None
ERR3283006 RR-TB lineage4.9 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR3283021 HR-TB None
ERR3283008 Other lineage4.9 None
ERR3283013 MDR-TB lineage4 None
ERR3797060 Other La1.8.1 None
ERR3283033 Sensitive lineage4.9 None
ERR3283046 MDR-TB lineage4.9 None
ERR3797047 HR-TB lineage4 None
ERR3797062 RR-TB lineage4.9 None
ERR3283053 Other lineage4.9 None
ERR3439265 Other lineage4.9 None
ERR3439489 RR-TB La1.8.1 None
ERR3445487 Other La1.7.X-unk4 None
ERR3797065 MDR-TB lineage4 None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR4188213 HR-TB La1.8.1 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR473367 Sensitive lineage4.9 None
ERR473303 Sensitive lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769419 Other lineage4.9 None
ERR4769418 Other La1.2 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769442 HR-TB lineage4 None
ERR4769436 Other La1.3 None
ERR4769495 Other La1.3 None
ERR4769444 HR-TB lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769554 RR-TB lineage4.9 None
ERR4769508 RR-TB lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
ERR4796351 MDR-TB lineage4.9 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4800222 Sensitive lineage1.1.2 None
ERR4808964 RR-TB lineage2.2.1 None
ERR6052110 Pre-XDR-TB lineage2.2.2 None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR6052085 Pre-XDR-TB lineage2.2.2 None
ERR5979454 Pre-XDR-TB lineage3 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6358951 HR-TB lineage4 None
ERR6197035 Other lineage4.7 None
ERR6359069 Other lineage4.9 None
ERR6359066 HR-TB lineage4 None
ERR6359070 Other lineage4.9 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR736837 Other lineage4.9 None
ERR7801175 RR-TB lineage4.6.5 None
ERR9029360 MDR-TB lineage2.2.1 None
ERR6359074 HR-TB lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR736816 Other lineage4.9 None
ERR736831 HR-TB lineage4.9 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR7801176 RR-TB lineage4.6.5 None
SRR023487 RR-TB lineage2.2.1 None
ERR9786076 Sensitive lineage3 None
ERR9992784 Pre-XDR-TB lineage2.2.2 None
SRR10315567 Other lineage2.2.1 None
SRR10315558 Sensitive lineage2.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1049672 Other lineage3 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR11342634 MDR-TB lineage4.8 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR10993951 RR-TB La1.6 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1062928 RR-TB lineage4 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR1173170 Other lineage4.9 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR1173139 Sensitive lineage4.9 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1140736 RR-TB None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1172717 Other lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR1173310 MDR-TB None
SRR1173281 RR-TB lineage3 None
SRR1173385 Sensitive lineage4.9 None
SRR1173421 RR-TB lineage4.9 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
SRR1173515 HR-TB lineage4.9 None
SRR1173833 Other lineage4.9 None
SRR1173719 HR-TB lineage3 None
SRR1173740 Other None
SRR1173770 Other lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180444 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181214 Other lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181368 Other lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1183054 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR1196545 HR-TB lineage4.9 None
SRR16156188 HR-TB lineage4.9 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR15315797 RR-TB lineage2.2.1 None
SRR16149126 MDR-TB lineage4.2.2.1 None
SRR16149129 MDR-TB lineage4.2.2.1 None
SRR16156775 Other lineage4.9 None
SRR16156697 MDR-TB lineage2.2.1 None
SRR16156804 RR-TB lineage4.9 None
SRR16157123 Other lineage4.9 None
SRR16156832 RR-TB None
SRR16278274 Other La1.4 None
SRR16627752 RR-TB lineage4.4 None
SRR1735596 RR-TB lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR20969475 Other lineage1.2.1.2 None
SRR19303820 RR-TB lineage4.8 None
ERR4815310 Other None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR22424765 MDR-TB lineage4 None
SAMEA3501065 RR-TB lineage4.8 None
ERR4815225 RR-TB lineage1.2.2 None
SRR22424851 MDR-TB lineage4.3.3 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR176780 Sensitive lineage4.9 None
ERR4815471 Other lineage4.9 None
ERR4814356 Pre-XDR-TB lineage3.1.2 None
ERR4814617 Other lineage1.1.3.1 None
ERR4814623 Other lineage4.8 None
ERR4814681 Other lineage2.2.1 None
ERR4813263 MDR-TB lineage4.8 None
ERR4814709 Other lineage4.1.1 None
ERR4812763 Other lineage2.2.1 None
SRR3675230 RR-TB lineage3 None
ERR4815534 Other lineage4 None
SAMEA3501015 Other lineage4.8 None
ERR4815550 Other lineage4 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4815572 Other lineage4.1.2.1 None
ERR2228965 Other lineage4.8 None
ERR4815556 RR-TB lineage3 None
ERR4815079 RR-TB lineage3 None
ERR4816964 Other lineage4.9 None
ERR4816982 Other lineage4 None
ERR4815944 HR-TB lineage4.1.2.1 None
ERR4816967 RR-TB lineage5 None
ERR4816991 Sensitive lineage4.9 None
ERR4817069 RR-TB None
SRR3675552 RR-TB lineage4.9 None
ERR4816322 Other lineage4.9 None
ERR2229147 Other lineage4.8 None
ERR2027257 Other lineage4.1.2.1 None
ERR2027290 RR-TB lineage3.1 None
ERR4816548 MDR-TB lineage4.5 None
ERR2229233 Sensitive lineage4 None
ERR4816417 Other lineage4.9 None
ERR2229198 MDR-TB lineage4.8 None
ERR2229204 Other lineage4.8 None
ERR4816610 RR-TB lineage4.3.3 None
ERR216965 HR-TB lineage4.9 None
ERR2229234 RR-TB lineage4.8 None
ERR4816756 RR-TB None
ERR2229791 RR-TB lineage4.9 None
ERR2229366 Other lineage4.8 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR4816729 Sensitive lineage4.9 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4816762 Other lineage4;lineage2 None
ERR4816755 Other lineage4.1.1.3 None
ERR4816852 Other lineage4.9 None
ERR2229442 HR-TB lineage4.8 None
ERR2229801 Other lineage4 None
ERR2228813 Other lineage4.8 None
ERR2228810 RR-TB lineage4 None
SRR4033462 Sensitive lineage4.3.2.1 None
ERR2228815 RR-TB lineage4.8 None
ERR4817453 Sensitive lineage4 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR2228838 RR-TB lineage4.8 None
ERR2228890 Other lineage4 None
ERR4818710 Sensitive lineage4.9 None
ERR2228899 RR-TB lineage4.8 None
ERR4815816 Other lineage4.5 gb
ERR2228900 RR-TB lineage4.8 None
ERR4817310 Other lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2 None