EBG00000313339 - n.2882A>G
Drug resistance types
94 Sensitive
74 RR-TB
53 HR-TB
88 MDR-TB
36 Pre-XDR-TB
1 XDR-TB
308 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.2.2 | 5 |
| lineage4.9 | 168 |
| lineage4.3.2.1 | 5 |
| lineage3.1.1;lineage4 | 1 |
| lineage2.2.1 | 102 |
| lineage3 | 41 |
| lineage4.4.1.1.1 | 6 |
| lineage4.8 | 47 |
| lineage4.1.1.3.1 | 4 |
| lineage4.1.2.1 | 27 |
| lineage4.6.2.2 | 3 |
| lineage4.3.3 | 21 |
| lineage4.4.1.1 | 13 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage3.1.1 | 10 |
| lineage4.3.4.2 | 4 |
| lineage4.5 | 4 |
| lineage4.1.2 | 6 |
| lineage4.3.2 | 3 |
| lineage4.2.1 | 13 |
| lineage3.1.2.2 | 1 |
| lineage4.6.1.2 | 5 |
| La1.8.1 | 6 |
| lineage4 | 4 |
| lineage3.1.2.1 | 6 |
| lineage4.1.1.3 | 13 |
| lineage1.1.3.2 | 1 |
| lineage4.2.1.1 | 2 |
| lineage1.1.1 | 3 |
| lineage4.1.1.1 | 7 |
| lineage4.3 | 3 |
| lineage4.8.1 | 6 |
| lineage4.8.2 | 1 |
| lineage4.3.4.2.1 | 11 |
| La1.3 | 8 |
| lineage2.2.1.1 | 5 |
| lineage4.4.2 | 3 |
| lineage4.3.1.1 | 6 |
| lineage2.2.2 | 9 |
| lineage4.7 | 5 |
| lineage4.3.4.1;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.6.3 | 2 |
| lineage2.2.1;lineage4.8 | 2 |
| lineage4.6 | 1 |
| lineage1.2.1.1 | 2 |
| lineage2.2.1;lineage4 | 2 |
| lineage6.1.3 | 1 |
| lineage4.1 | 2 |
| lineage4.3.4.1 | 3 |
| lineage2.2;lineage4.9 | 1 |
| lineage2.2.1;lineage4.9 | 4 |
| lineage6.1.2 | 1 |
| lineage4.4 | 1 |
| lineage1.2.2.2 | 2 |
| lineage1.2.2 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage5.1.1 | 1 |
| lineage3;lineage4 | 2 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| La1.6 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage3.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage2.2;lineage4 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.3 | 1 |
| lineage3.1 | 1 |
| lineage4.2.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| lineage4.6.1.1 | 1 |
| La1.7.X-unk4 | 1 |
| lineage1.2.1.2 | 1 |
| La1.2 | 2 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.1.4 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.6.5 | 1 |
| La1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 654 |
Geographic prevalence
Country level data for this variant is available for 35 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2027230 | Other | lineage4.2.2.2 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR2100532 | Sensitive | lineage3 | None | SRR1183281 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR1180410 | Sensitive | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR19303899 | Other | lineage3 | None | SRR6046442 | Other | lineage3 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR1183170 | Other | lineage4.9 | None | ERR4821761 | Other | lineage3 | gb | SRR6045359 | HR-TB | lineage4.9 | None | SRR1181358 | Other | lineage4.9 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR2514926 | Other | lineage4.6.2.2 | gb | SRR10315558 | RR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR7070320 | Other | lineage4.8 | None | SRR7070223 | HR-TB | lineage3 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR7070134 | Other | lineage3.1.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR7069319 | Other | lineage4.5 | None | ERR4769493 | Other | lineage4.9 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | SRR1183438 | Other | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR4816800 | Other | lineage4.8 | gb | SRR1180375 | Sensitive | lineage4.9 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR1181256 | Other | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | SRR7131123 | Other | lineage4.8 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR9786076 | Other | lineage3 | None | ERR3468613 | Other | La1.8.1 | None | ERR2514179 | Sensitive | lineage3.1.1 | gb | SRR18002974 | Other | lineage2.2.1 | None | SRR3675565 | Other | lineage4 | None | SRR13180204 | Other | lineage3 | None | SRR7069391 | Other | lineage4.9 | None | ERR2513830 | RR-TB | lineage4.8 | None | SRR1182958 | Other | lineage4.9 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | ERR4814362 | Other | lineage4.8 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR4821917 | Sensitive | lineage1.1.3.2 | gb | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR4797690 | Other | lineage3 | in | SRR7617847 | Other | La1.8.1 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | ERR176741 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR19303817 | Other | lineage2.2.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR1735596 | RR-TB | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR867574 | Other | lineage4.9 | None | SRR6045603 | Other | lineage4.1.1.3 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | SRR1180113 | Other | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR4819876 | Other | lineage4.3.4.2.1 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR4769514 | Other | La1.3 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7069193 | Other | lineage4.3.1.1 | None | SRR9971223 | Other | lineage2.2.1 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR7645928 | Other | lineage4.7 | None | SRR3675582 | Other | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR7131061 | Other | lineage2.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR19303876 | Other | lineage4.7 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR3675527 | Other | lineage4.9 | None | SRR18003007 | MDR-TB | lineage4.5 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR1183402 | Other | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4814639 | HR-TB | lineage4.9 | None | SRR6257067 | HR-TB | lineage4.2.1 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181214 | Other | lineage4.9 | None | ERR5311077 | Other | La1.8.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR1180503 | Other | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR6046729 | Other | lineage3 | None | SRR7070144 | Other | lineage4.8 | None | ERR10796632 | Other | lineage4.3.3 | None | SRR1183373 | Other | lineage4.9 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR11773809 | Pre-XDR-TB | lineage2.2.1 | None | ERR3275209 | Sensitive | lineage4.6.3 | nl | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR11591425 | RR-TB | lineage4.3.4.2 | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR6359074 | HR-TB | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | SRR6044952 | Other | lineage4.9 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181368 | Other | lineage4.9 | None | ERR2600561 | Other | lineage2.2.1;lineage4.8 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR6044936 | Other | lineage4.6 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR5818388 | Other | lineage4.9 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4819357 | Sensitive | lineage4.9 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR1181589 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | ERR4816964 | HR-TB | lineage4.9 | None | SRR1181490 | Other | lineage4.9 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR7911741 | MDR-TB | lineage2.2.1 | us | SRR6046291 | Other | lineage3 | None | ERR3797065 | RR-TB | lineage4.9 | None | DRR184903 | Sensitive | lineage2.2.2 | None | ERR4821519 | Other | lineage3 | gb | SRR7131147 | Other | lineage4.1.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR1180597 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR1140724 | Other | lineage2.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR3105762 | Sensitive | lineage4.1 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR1173385 | Sensitive | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR1002691 | HR-TB | lineage4.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR3077969 | Other | La1.3 | None | ERR2514943 | Sensitive | lineage4.8 | gb | SRR7070446 | Other | lineage3 | None | SRR1183684 | Other | lineage4.9 | None | SRR1182954 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR18002875 | MDR-TB | lineage2.2.2 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4816569 | Sensitive | lineage4.3.3 | gb | SRR7069314 | Other | lineage3 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR6046852 | MDR-TB | lineage3 | None | ERR4815561 | Sensitive | lineage4.1.1.1 | None | ERR4817434 | Other | lineage3 | None | ERR228175 | Sensitive | lineage3 | None | ERR2446509 | Other | lineage3 | nl | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR7070521 | Other | lineage4.2.1.1 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | SRR1175487 | Sensitive | lineage4.9 | None | ERR2851359 | Other | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR19304094 | Other | lineage6.1.2 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR4816868 | Other | lineage4.4.1.1 | None | SRR1180686 | Other | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | ERR10796640 | Other | lineage4.1.2.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4818988 | Other | lineage1.2.2 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR4816548 | HR-TB | lineage4.5 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR10796565 | Other | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR1183213 | Other | lineage4.9 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR10796592 | Other | lineage4.9 | None | ERR5866579 | MDR-TB | lineage2.2.1 | None | SRR6855695 | Sensitive | lineage4.8 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR4822150 | Other | lineage4.8 | gb | SRR11342688 | Other | lineage4.2.2.2 | None | SRR6044841 | Other | lineage4.9 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046020 | Other | lineage3 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR502517 | Other | lineage5.1.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | ERR3276144 | Other | lineage3 | nl | ERR4814976 | Other | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR10796617 | Other | lineage4.3.4.1 | None | SRR7069137 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR1183224 | Other | lineage4.9 | None | SRR7069074 | Other | lineage3 | None | ERR4817294 | Other | lineage4.1.2 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180578 | Other | lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR10796566 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR9117760 | HR-TB | lineage4.3 | None | SRR1180831 | Other | lineage4.9 | None | SRR1183520 | Other | lineage4.9 | None | ERR10796576 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR1182927 | Other | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4820290 | Other | lineage3 | None | SRR1180486 | Other | lineage4.9 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR10796635 | Other | lineage4.8 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR7070602 | Other | lineage4.2.1 | None | SRR9971200 | MDR-TB | lineage4.3.2 | None | ERR9786276 | Sensitive | lineage4.8 | None | SRR1180345 | Other | lineage4.9 | None | SRR1183181 | Sensitive | lineage4.9 | None | ERR2600562 | MDR-TB | lineage2.2.1;lineage4.8 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | SRR1180440 | Other | lineage4.9 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR4769408 | Other | La1.3 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR3675265 | Other | lineage4 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR11462861 | Other | La1.8.1 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR3283046 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | SRR3675552 | Other | lineage4.9 | None | SRR7070388 | Other | lineage3.1.2 | None | ERR5866580 | MDR-TB | lineage2.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR4818050 | Sensitive | lineage4.6.2.2 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR4769423 | Other | La1.3 | None | SRR7070469 | Other | lineage4.3.1.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR11342680 | Other | lineage4.8 | None | ERR10796634 | Other | lineage4.7 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR7070479 | Other | lineage4.1.2 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183190 | Other | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR7645927 | Other | lineage4.8 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR5163959 | Other | lineage4.9 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR6045778 | Other | lineage3.1 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4818126 | Other | lineage1.2.2 | None | SRR1181349 | Sensitive | lineage4 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR7070293 | Other | lineage4.8 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR19304104 | Other | lineage4.8 | None | SRR18002956 | Other | lineage2.2.1 | None | ERR4820723 | Other | lineage4.4.1.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR7069128 | Other | lineage1.2.1.2.1 | None | ERR4817398 | Other | lineage3.1.1 | None | SRR1183067 | Other | lineage4.9 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | SRR1182900 | Sensitive | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR18002997 | Other | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR1182878 | Other | lineage4.9 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR1181264 | Sensitive | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR6045159 | Other | lineage3.1.1 | None | ERR867572 | Other | lineage4.9 | None | ERR4814911 | Other | lineage4.3.3 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR3275190 | Other | lineage3 | nl | SRR6046210 | Other | lineage4.9 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1140716 | Other | lineage3 | None | ERR867544 | Other | lineage4.9 | None | SRR7070087 | Other | lineage4.8.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4818915 | Sensitive | lineage4.1.1.1 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR5007178 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR736831 | Other | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR4829337 | Sensitive | lineage4.8 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR867567 | RR-TB | lineage3 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR3675509 | Other | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR6044904 | Other | lineage3 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR1180024 | Other | lineage4.9 | None | SRR1183339 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1181592 | Other | lineage4.9 | None | SRR4033549 | Other | lineage2.2.2 | None | SRR11349153 | RR-TB | lineage4.1.1.1 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR1180569 | Sensitive | lineage4.9 | None | ERR2432997 | Other | lineage4.8 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR7131297 | Other | lineage1.2.1.2 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR1180087 | Other | lineage4.9 | None | SRR7068938 | Sensitive | lineage3.1.1 | None | SRR11349208 | MDR-TB | lineage2.2.1 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR18003045 | Other | lineage2.2.1 | None | ERR4769555 | Sensitive | La1.3 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR2514351 | Sensitive | lineage3 | gb | SRR7851312 | Other | La1.2 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1180446 | Other | lineage4.9 | None | ERR3275465 | Sensitive | lineage2.2.1 | nl | SRR6045384 | Other | lineage4.1.2.1 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR4815502 | Other | lineage4.1 | None | SRR6046737 | Other | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | SRR9971029 | MDR-TB | lineage2.2.2 | None | ERR4769495 | Other | La1.3 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4769436 | Other | La1.3 | None | ERR5979407 | Other | lineage3 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR5153833 | Other | lineage2.2.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | SRR7131121 | Other | lineage4.3.3 | None | ERR323037 | Other | lineage4.9 | None | ERR4819198 | Other | lineage2.2.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR1181299 | Other | lineage4.9 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1183548 | Other | lineage4.9 | None | ERR4769552 | Sensitive | La1.3 | None | ERR10796560 | Other | lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR18912069 | Other | lineage4.1.2.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR1181569 | Other | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR1173281 | Other | lineage3 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR1173170 | Other | lineage4.9 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR7069518 | Other | lineage4.8 | None | SRR1173719 | Other | lineage4.9 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | ERR4769418 | Other | La1.2 | None | ERR4818831 | Other | lineage3 | None | SRR7236330 | Other | La1.8.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR4769516 | Sensitive | lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR1183341 | Other | lineage4.9 | None | SRR7131145 | Other | lineage4.1.2.1 | None | ERR10796589 | Other | lineage4.9 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR1181147 | Other | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR18003023 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR15276982 | XDR-TB | lineage3 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR1180687 | Other | lineage4.9 | None | SRR3675261 | Other | lineage1.2.1.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR4814681 | Other | lineage2.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR867571 | Other | lineage4.9 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR7068912 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828962 | Sensitive | lineage4.1.4 | it | ERR867521 | MDR-TB | lineage2.2.1 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1184308 | RR-TB | lineage4.9 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | ERR9117812 | Other | lineage4.3.1.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR18213726 | Other | lineage3 | None | ERR4820193 | Other | lineage3 | None | SRR19303907 | Other | lineage4.8 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR1180647 | Other | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR7069946 | Other | lineage4.8 | None | ERR3468488 | Other | La1.8.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR2446445 | Sensitive | lineage2.2.1 | nl | ERR10796597 | Other | lineage4.3.3 | None | SRR1183531 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR1181422 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR4820075 | Other | lineage4.1.2.1 | None | SRR1183091 | Other | lineage4.9 | None | SRR6045133 | HR-TB | lineage4.5 | gb | SRR1180399 | Sensitive | lineage4.9 | None | SRR1183686 | Sensitive | lineage4.9 | None | ERR10796553 | Other | lineage4.9 | None | SRR1180047 | Other | lineage4.9 | None | SRR3675389 | Other | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7069839 | Other | lineage4.8 | None | SRR1183152 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR1181130 | Other | lineage4.1.1.3 | None | ERR10796593 | Other | lineage4.3 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None |
|---|
