EBG00000313339 - n.2226A>T
Drug resistance types
92 Sensitive
66 RR-TB
40 HR-TB
65 MDR-TB
32 Pre-XDR-TB
1 XDR-TB
359 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.2 | 8 |
| lineage2.2.1 | 90 |
| lineage4.2.2 | 1 |
| lineage4.1.1.3 | 15 |
| lineage4.6.2.2 | 5 |
| lineage4.8 | 92 |
| lineage4.9 | 133 |
| lineage1.1.3.1 | 4 |
| La1.4 | 1 |
| lineage4.6.1.1 | 4 |
| lineage3 | 42 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage4.3.4.2.1 | 9 |
| lineage4.3.2.1 | 1 |
| lineage4.5 | 3 |
| lineage4.1.2.1 | 39 |
| La1.2 | 2 |
| lineage1.2.1.2 | 2 |
| lineage2.2.1.1 | 5 |
| lineage4.1.1.1 | 6 |
| lineage4.3.3 | 18 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage3.1.3 | 2 |
| lineage4.4.2 | 2 |
| lineage3;lineage4.2.2.2 | 1 |
| lineage4.4.1.1 | 14 |
| lineage1.2.1.2.1 | 1 |
| lineage4.8.1 | 4 |
| lineage1.2.2.2 | 3 |
| lineage3.1.1 | 6 |
| lineage3.1.2.1 | 5 |
| lineage4.8.2 | 1 |
| lineage3.1.1;lineage4 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.3.2 | 6 |
| lineage4.3.1.1 | 3 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.4.1.1.1 | 3 |
| lineage6.1.3 | 2 |
| lineage4.2.1 | 8 |
| lineage4.3.4.2 | 5 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage4.7 | 6 |
| lineage4.2.2.2 | 8 |
| lineage4.1.2 | 4 |
| lineage4.3 | 3 |
| lineage1.1.1.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 2 |
| lineage4.9.1 | 1 |
| lineage3.1;lineage4.6.1.1 | 1 |
| La1.8.1 | 7 |
| 2 | |
| lineage1.1.2 | 4 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage3.1 | 1 |
| lineage2.2.1;lineage4.8 | 2 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3.1.2.2 | 2 |
| lineage4.6.5 | 3 |
| lineage2.2.1.2 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.4.1.2 | 3 |
| lineage4.3.3;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.1 | 1 |
| lineage4 | 6 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.1.3 | 2 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage1.1.1 | 3 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| La1.6 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.2.1.1 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage6.1.2 | 1 |
| lineage4.6 | 1 |
| La1.3 | 1 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage3;lineage4 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage5 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage1.1.3.3 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 655 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR4818691 | Other | lineage4.8 | None | SAMN02585928 | Other | lineage4.1.1.3 | za | ERR4819383 | RR-TB | lineage4.9 | None | SRR18002906 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814617 | Other | lineage1.1.3.1 | None | SRR16278274 | Other | La1.4 | None | ERR2229147 | Other | lineage4.8 | None | SRR1173182 | Other | lineage4.6.1.1 | None | SRR7069074 | Other | lineage3 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR7070515 | Other | lineage1.1.3.1 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR473303 | Sensitive | lineage4.9 | None | SRR3675496 | Other | lineage4.1.1.3 | gb | SRR9971168 | Other | lineage4.3.2.1 | None | ERR10796566 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR978754 | RR-TB | lineage4.8 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR18002987 | Other | lineage2.2.1 | None | ERR4820891 | Sensitive | lineage4.9 | gb | ERR10796577 | Other | lineage4.9 | None | SRR6044993 | Other | lineage3 | None | SRR1723899 | Sensitive | lineage4.5 | cn | SRR18003023 | Other | lineage2.2.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR1173770 | Other | lineage4.9 | None | ERR10796635 | Other | lineage4.8 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR11342646 | HR-TB | lineage3 | None | ERR4769418 | Other | La1.2 | None | SRR7131297 | Other | lineage1.2.1.2 | None | ERR9786076 | Sensitive | lineage3 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | ERR10796632 | Other | lineage4.3.3 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR18002956 | Other | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19303907 | Other | lineage4.8 | None | SRR1181214 | Other | lineage4.9 | None | SRR6044952 | Other | lineage4.9 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4.9 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR4820503 | Sensitive | lineage2.2.1 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR19303805 | Sensitive | lineage4.8 | None | ERR2229733 | Other | lineage4.8 | dk | ERR4817948 | Other | lineage3 | gb | SRR5818694 | Other | lineage3;lineage4.2.2.2 | None | ERR6865446 | Other | lineage4.4.1.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | ERR978751 | Other | lineage4.8 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1180250 | Other | lineage4.9 | None | ERR978750 | RR-TB | lineage4.8 | None | SRR1735599 | Other | lineage1.2.2.2 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18715102 | MDR-TB | lineage2.2.1 | None | SRR6045159 | Other | lineage3.1.1 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | SRR1175052 | HR-TB | lineage4.9 | None | SRR7068941 | Other | lineage4.8.2 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | ERR4815784 | Other | lineage2.2.1 | gb | ERR10796562 | Other | lineage4.3.4.1 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR4972588 | MDR-TB | lineage4.3.2 | None | ERR2228910 | Other | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR7069347 | Other | lineage4.1.2.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR5865106 | MDR-TB | lineage4.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR978726 | RR-TB | lineage4.8 | None | SRR1173834 | Other | lineage4.6.1.1 | None | SRR6046208 | Other | lineage4.8 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR6046117 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | SRR7069518 | Other | lineage4.8 | None | ERR10796634 | Other | lineage4.7 | None | SRR7131237 | Other | lineage2.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | SRR19303784 | Other | lineage4.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR978752 | Other | lineage4.8 | None | SRR6044983 | Other | lineage3.1.1 | None | ERR4818050 | Sensitive | lineage4.6.2.2 | None | ERR176741 | Other | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | ERR10796581 | Other | lineage4.1.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR7070154 | Other | lineage4.4.1.1 | None | ERR10796553 | Other | lineage4.9 | None | SRR18002980 | Other | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR4819324 | Other | lineage4.8 | gb | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR1173565 | MDR-TB | lineage3.1;lineage4.6.1.1 | None | ERR2514351 | Sensitive | lineage3 | gb | SRR3675527 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR6045384 | Other | lineage4.1.2.1 | None | ERR10796598 | Other | lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR6045621 | Other | lineage4.1.1.3 | None | ERR9117760 | HR-TB | lineage4.3 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR19303899 | Other | lineage3 | None | SRR8600288 | Other | La1.8.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR7070144 | Other | lineage4.8 | None | ERR5865953 | MDR-TB | lineage2.2.1 | None | SRR6046087 | Sensitive | lineage4.9 | None | SRR5007182 | MDR-TB | lineage3 | None | ERR4817069 | RR-TB | None | SRR7070134 | Other | lineage3.1.1 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR6044769 | Sensitive | lineage1.1.2 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR7069760 | Other | lineage3 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR867521 | MDR-TB | lineage2.2.1 | None | SRR1173281 | Other | lineage3 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | ERR4817070 | Other | lineage1.1.2 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR7069391 | Other | lineage4.9 | None | ERR017781 | Other | lineage3 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR12062551 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR7069839 | Other | lineage4.8 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6045778 | Other | lineage3.1 | None | SRR6045986 | Other | lineage3 | None | ERR978727 | Other | lineage4.8 | None | SRR6046141 | Other | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR10796591 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR2600561 | Other | lineage2.2.1;lineage4.8 | None | ERR4796577 | HR-TB | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4816322 | Other | lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR1140716 | Other | lineage3 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816868 | Other | lineage4.4.1.1 | None | SRR9971223 | Other | lineage2.2.1 | None | ERR10796560 | Other | lineage4.9 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR22249686 | HR-TB | lineage2.2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR11342680 | Other | lineage4.8 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR4820290 | Other | lineage3 | None | SRR7069473 | Other | lineage4.1.1.2 | None | SRR7069377 | Other | lineage3 | None | SRR7236399 | Other | La1.8.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR10796565 | Other | lineage4.9 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR22048550 | Other | lineage1.1.3.1 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | SRR1180345 | Other | lineage4.9 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR2600562 | MDR-TB | lineage2.2.1;lineage4.8 | None | ERR4819198 | Other | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR4816800 | Other | lineage4.8 | gb | ERR1750931 | Sensitive | lineage4.1.2.1 | za | ERR4814994 | HR-TB | lineage2.2.1 | gb | SRR19303820 | RR-TB | lineage4.8 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR3675513 | Other | lineage4.8 | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR4817735 | Other | lineage4.8 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR4586795 | Other | La1.8.1 | None | ERR019855 | Other | lineage3 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6046210 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR6045957 | Other | lineage4.9 | None | SRR18213721 | Other | lineage4.8 | None | SRR7617847 | Other | La1.8.1 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR7131123 | Other | lineage4.8 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR7131161 | Other | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR1665404 | Pre-XDR-TB | lineage2.2.1 | None | SRR7069675 | Other | lineage3 | None | SRR7851312 | Other | La1.2 | None | ERR2513259 | Other | lineage3 | None | ERR4814763 | Other | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR1173421 | Other | lineage4.9 | None | ERR867575 | Other | lineage4.9 | None | SRR7070446 | Other | lineage3 | None | SRR6045480 | Sensitive | lineage4.1.1.1 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR3675225 | Other | lineage2.2.1.2 | None | ERR4816569 | Sensitive | lineage4.3.3 | gb | SRR7131196 | Other | lineage4.8 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR19304115 | Other | lineage4.1.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR4817434 | Other | lineage3 | None | SRR6397579 | Other | lineage4.4.1.2 | ca | SRR7131121 | Other | lineage4.3.3 | None | SRR7131147 | Other | lineage4.1.2.1 | None | ERR2228838 | Other | lineage4.8 | None | ERR2179662 | Sensitive | lineage4.5 | cn | ERR6359066 | HR-TB | lineage4.9 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR978762 | Other | lineage4.8 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | ERR270777 | HR-TB | lineage4.1.2 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR978748 | Other | lineage4.8 | None | SRR19303949 | Other | lineage4.3.3 | None | ERR10796615 | Other | lineage4.3.3;lineage4.9 | None | SRR3675389 | Other | lineage4.9 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR4816852 | Other | lineage4.9 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR3957925 | Sensitive | lineage4.3.2 | None | ERR4769419 | Sensitive | lineage4.9 | None | ERR978735 | Other | lineage4.8 | None | SAMN02567682 | Other | lineage4.6.1.1 | ug | ERR4819011 | Other | lineage3.1.2.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR7070153 | Sensitive | lineage4.1.2.1 | None | SRR1181130 | Other | lineage4.1.1.3 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR7131234 | Other | lineage4.9 | None | ERR4815502 | Other | lineage4.1 | None | SRR6046737 | Other | lineage4.9 | None | DRR034348 | Other | lineage2.2.1 | None | SRR1173833 | Other | lineage4.9 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR736831 | Other | lineage4.9 | None | ERR4819166 | Other | lineage3 | gb | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4816232 | Other | lineage4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR6046442 | Other | lineage3 | None | ERR6359070 | Sensitive | lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR10869285 | Pre-XDR-TB | lineage2.2.2 | None | SRR5818684 | Other | lineage4.2.2.2 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | SRR6044815 | Other | lineage4.9 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR978694 | Other | lineage4.8 | None | SRR7496523 | Other | lineage4.7 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR7131233 | MDR-TB | lineage4.3.3 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR2228810 | Other | lineage4.8;lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821286 | Other | lineage4.8 | None | SRR6045832 | Other | lineage4.9 | None | ERR1163055 | MDR-TB | lineage4.8 | None | ERR3275190 | Other | lineage3 | nl | ERR4798823 | HR-TB | lineage4 | None | ERR4818904 | Other | lineage4.8 | None | ERR4819314 | Other | lineage1.1.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR4820151 | Other | lineage4.8 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR978761 | Other | lineage4.8 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR1184012 | Other | lineage4.1.1.3 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4816702 | Other | lineage4.6.2.2 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR6046815 | Other | lineage3 | None | ERR2229760 | Sensitive | lineage4.8 | dk | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR4820720 | Other | lineage4.1.2.1 | None | SRR3675265 | Other | lineage4 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR2229436 | Other | lineage4.8 | None | SRR3675565 | Other | lineage4 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR978756 | Other | lineage4.8 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR5007163 | Other | lineage3;lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | SRR7070320 | Other | lineage4.8 | None | SRR7131068 | Other | lineage4.8 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR6046497 | Sensitive | lineage4.9 | None | SRR22048474 | RR-TB | lineage4.8 | None | ERR4818272 | Other | lineage4.3.2 | None | SRR7069946 | Other | lineage4.8 | None | SRR21661648 | Other | lineage2.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4819002 | HR-TB | lineage4.8 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR7070251 | Sensitive | lineage4.1.1.3.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR5153833 | Other | lineage2.2.1 | None | SRR6045603 | Other | lineage4.1.1.3 | None | ERR2446509 | Other | lineage3 | nl | SRR7070521 | Other | lineage4.2.1.1 | None | SRR7069687 | Other | lineage4.1.1.3.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR9786276 | Sensitive | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR1180195 | Sensitive | lineage4.1.1.3 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR19304094 | Other | lineage6.1.2 | None | ERR1063855 | Other | lineage4.9 | None | SRR5007186 | Sensitive | lineage4.6 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR7069082 | Other | lineage4.1.2.1 | None | SRR18003044 | MDR-TB | lineage2.2.1 | None | SRR15276982 | XDR-TB | lineage3 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR7070293 | Other | lineage4.8 | None | ERR4769495 | Other | La1.3 | None | ERR176605 | HR-TB | lineage4.3.4.2.1 | mw | ERR6197034 | Sensitive | lineage4.9 | None | ERR2228890 | Other | lineage4.8;lineage4.9 | None | ERR2229204 | Other | lineage4.8 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR3675582 | Other | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR19303876 | Other | lineage4.7 | None | SRR7236134 | Other | La1.8.1 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR867572 | Other | lineage4.9 | None | SAMEA3450033 | Other | lineage4.8 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR18002948 | Other | lineage2.2.1 | None | ERR4820030 | Other | lineage4.9 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | ERR9117805 | Other | lineage4.3.2 | None | SRR6397815 | Other | lineage4.4.1.1 | None | DRR184629 | Other | lineage2.2.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR18003051 | Other | lineage2.2.1 | None | SRR18911555 | Other | lineage4.1.2.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR2229541 | Other | lineage4.8 | None | SRR6045928 | Other | lineage4.9 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR10796593 | Other | lineage4.3 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | ERR2229366 | Other | lineage4.8 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4814976 | Other | lineage4.9 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR4817189 | Other | lineage4.7 | None | ERR4819641 | Other | lineage4.6.2.2 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR978747 | Other | lineage4.8 | None | ERR2228899 | Other | lineage4.8 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR10614047 | Sensitive | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR6045944 | Other | lineage4.1.2.1 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR911929 | Other | lineage4.8 | None | SRR19303985 | Sensitive | lineage4.8 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796618 | Other | lineage4.3.4.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR6045553 | Other | lineage4.1.2.1;lineage4.9 | None | SRR6045613 | Other | lineage3.1.3 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR18002997 | Other | lineage2.2.1 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR4819191 | Other | lineage4.6.2.2 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR2229540 | Sensitive | lineage4.8 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR6152980 | HR-TB | lineage4.8 | ca | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR19304104 | Other | lineage4.8 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4816967 | Other | lineage5 | None | ERR978693 | Other | lineage4.8 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4819876 | Other | lineage4.3.4.2.1 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR911930 | Other | lineage4.8 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR18002945 | Other | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR3675509 | Other | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR3014599 | Pre-XDR-TB | lineage4.1.2.1 | tn | SRR6045178 | Other | lineage3 | None | SRR7070266 | Other | lineage1.1.2 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR7070087 | Other | lineage4.8.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | ERR4816270 | Other | lineage4.1.2.1 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR18003049 | Other | lineage2.2.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR11349195 | MDR-TB | lineage4.4.1.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR16058249 | Sensitive | lineage4.2.2.2 | None | ERR4816470 | HR-TB | lineage3 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR7069193 | Other | lineage4.3.1.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR7070479 | Other | lineage4.1.2 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | ERR4822150 | Other | lineage4.8 | gb | SRR11342688 | Other | lineage4.2.2.2 | None | SRR6044841 | Other | lineage4.9 | None | ERR2228815 | Other | lineage4.8 | None | ERR978760 | RR-TB | lineage4.8 | None | ERR4816831 | Other | lineage4.1.2.1 | None | SRR19303917 | Sensitive | lineage2.2.1 | None | SRR6046802 | Other | lineage4.9 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR3276144 | Other | lineage3 | nl | SRR6045496 | Other | lineage6.1.3 | None | ERR4816571 | Sensitive | lineage1.1.2 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR7131032 | Other | lineage2.2.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR19303960 | Sensitive | lineage4.4.1.2 | None | SRR6257067 | HR-TB | lineage4.2.1 | None | ERR323037 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR11465488 | Sensitive | lineage4.1.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4820193 | Other | lineage3 | None | SRR19303815 | Other | lineage4.8 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | ERR4769493 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR1002691 | HR-TB | lineage4.2.1 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR2228900 | Other | lineage4.8 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | ERR867566 | Other | lineage4.9 | None | SRR6397642 | Other | lineage4.4.1.1 | None | ERR4818831 | Other | lineage3 | None | SRR7236330 | Other | La1.8.1 | None | SRR6044904 | Other | lineage3 | None | SRR6045295 | Other | lineage4.7 | None | ERR4178161 | Other | lineage4.4.1.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR1175512 | Sensitive | lineage4.9 | None |
|---|
