TB-Profiler
Home
Upload
SRA data
Rv0667
- c.3189G>T
Drug resistance types
233 Sensitive
71 RR-TB
169 HR-TB
87 MDR-TB
22 Pre-XDR-TB
2 XDR-TB
356 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
347
lineage4.8
50
lineage2.2.1
49
lineage4.1.2.1
30
29
M.canetti;lineage2.1;lineage4.9
26
lineage3
24
lineage2.1;lineage4.9
19
lineage4
13
La3;M.canetti;lineage2.1;lineage4.9
12
Showing 1 to 10 of 176 entries
Previous
1
2
3
4
5
…
18
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
940
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR188519
Other
lineage4.4.2
None
ERR036207
Other
lineage4.3;lineage4.9
None
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR067699
Sensitive
La1;lineage2;lineage4.9
None
ERR1023236
Other
lineage6.1.3
None
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1023509
Other
lineage4.9
None
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR1035122
Sensitive
lineage4.9
None
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
Showing 1 to 10 of 940 entries
Previous
1
2
3
4
5
…
94
Next