EBG00000313339 - n.2259C>G
Drug resistance types
93 Sensitive
47 RR-TB
33 HR-TB
96 MDR-TB
44 Pre-XDR-TB
1 XDR-TB
404 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.2.2 | 7 |
| lineage1.1.1 | 2 |
| La1.3 | 3 |
| lineage3 | 65 |
| lineage4.4.1.1.1 | 5 |
| lineage4.4.1.1 | 21 |
| lineage4.1.2.1 | 44 |
| lineage3;lineage4 | 2 |
| lineage4.8.2 | 4 |
| lineage3.1.3 | 3 |
| lineage4.1.2 | 8 |
| lineage4.3.3 | 24 |
| lineage4.1.1.1 | 7 |
| lineage3.1.2.2 | 4 |
| lineage4.1.1.3 | 16 |
| lineage2.2.1 | 118 |
| lineage2.2.1.1 | 8 |
| lineage4.2.2 | 2 |
| lineage4.9.1 | 1 |
| lineage3.1;lineage4.6.1.1 | 1 |
| lineage4.8 | 52 |
| lineage4.9 | 89 |
| lineage4.1 | 1 |
| lineage2.2.2 | 9 |
| lineage1.2.2.2 | 10 |
| lineage4.2.2.2 | 12 |
| La1.2 | 2 |
| lineage1.2.1.2 | 2 |
| lineage4.2.1 | 20 |
| lineage4.1.3 | 1 |
| lineage4.3.4.2 | 6 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage3.1.2.1 | 3 |
| lineage1.1.2 | 10 |
| lineage4.3.2 | 6 |
| lineage3.1.2 | 2 |
| lineage4 | 6 |
| lineage4.8.1 | 5 |
| lineage1.2.1.1 | 2 |
| lineage6.2.3 | 2 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.1.1.2 | 1 |
| La1.8.1 | 10 |
| lineage1.1.3.1 | 5 |
| lineage2.2.1;lineage4.8 | 2 |
| lineage6.1.3 | 2 |
| lineage4.3.2.1 | 5 |
| La1.4 | 1 |
| lineage3.1.1 | 11 |
| 2 | |
| lineage4.1;lineage4.9 | 1 |
| lineage4.5 | 4 |
| lineage4.7 | 7 |
| lineage4.1.1.3.1 | 4 |
| lineage4.4 | 2 |
| lineage3.1 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.1.1 | 7 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.4.2 | 2 |
| lineage4.3.4.2.1 | 4 |
| lineage4.3.4;lineage4.9 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.3.4.1 | 8 |
| M.canetti;lineage4.9 | 1 |
| lineage4.4.1.2 | 3 |
| lineage5.1.1 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage1.1.3.3 | 1 |
| lineage3.1.2.1;lineage4 | 1 |
| lineage1.2.1.2.1 | 4 |
| lineage4.6.1.1 | 1 |
| lineage4.2.1.1;lineage4.8 | 1 |
| lineage4.1.2.1;lineage4.9 | 2 |
| lineage3;lineage4.2.2.2 | 1 |
| lineage4.6 | 3 |
| lineage3.1.1;lineage4 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage6.1.2 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage2.2.1.2 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage4.3 | 2 |
| lineage4.8.2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage1.2.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.2.1.1 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.6.5 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 718 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7069648 | Other | lineage4.6.2.2 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4769480 | Other | La1.3 | None | SRR14179705 | Pre-XDR-TB | lineage3 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR7070350 | Sensitive | lineage4.4.1.1 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR1172065 | Pre-XDR-TB | lineage3 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR6044957 | Sensitive | lineage4.8.2 | None | SRR7068998 | Sensitive | lineage3.1.3 | None | ERR10796554 | Sensitive | lineage4.1.2 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR11349153 | RR-TB | lineage4.1.1.1 | None | SRR6045017 | Other | lineage3.1.2.2 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR18002988 | MDR-TB | lineage2.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18003052 | Other | lineage2.2.1.1 | None | SRR10315472 | MDR-TB | lineage2.2.1 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR037504 | Other | lineage4.9.1 | None | SRR18002906 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173565 | MDR-TB | lineage3.1;lineage4.6.1.1 | None | SRR22048484 | Sensitive | lineage4.8 | None | SRR3675527 | Other | lineage4.9 | None | SRR9971032 | RR-TB | lineage2.2.1 | None | SRR6045384 | Other | lineage4.1.2.1 | None | ERR10796598 | Other | lineage4.9 | None | SRR7069258 | HR-TB | lineage3 | None | ERR4815502 | Other | lineage4.1 | None | SRR6046737 | Other | lineage4.9 | None | SRR3675496 | Other | lineage4.1.1.3 | gb | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR6197022 | Other | lineage4.9 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | SRR7070548 | Other | lineage4.1.2.1 | None | ERR10796576 | Sensitive | lineage4.9 | None | ERR10796577 | Other | lineage4.9 | None | SRR12420587 | MDR-TB | lineage2.2.1 | None | SRR6044993 | Other | lineage3 | None | SRR7070144 | Other | lineage4.8 | None | SRR7068927 | Other | lineage1.2.2.2 | None | SRR10869285 | Pre-XDR-TB | lineage2.2.2 | None | SRR5818684 | Other | lineage4.2.2.2 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR10796635 | Other | lineage4.8 | None | SRR11342646 | HR-TB | lineage3 | None | ERR4769418 | Other | La1.2 | None | SRR7131297 | Other | lineage1.2.1.2 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342692 | MDR-TB | lineage2.2.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR7069249 | Sensitive | lineage3 | None | SRR7069472 | HR-TB | lineage3 | None | SRR7070256 | Other | lineage4.2.1 | None | SRR18002956 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19303907 | Other | lineage4.8 | None | SRR5818610 | Other | lineage3 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR10796599 | Other | lineage4.8 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR7131233 | MDR-TB | lineage4.3.3 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR867544 | Other | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR7069314 | Other | lineage3 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046739 | Other | lineage1.1.2 | None | SRR5163959 | Other | lineage4.9 | None | ERR10796561 | Other | lineage4.3.2 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR9971017 | HR-TB | lineage2.2.1 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR10796560 | Other | lineage4.9 | None | ERR4818261 | Other | lineage1.1.2 | None | SRR3675261 | Other | lineage1.2.1.1 | None | SRR1735599 | Other | lineage1.2.2.2 | None | SRR7068912 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR10796630 | Other | lineage6.2.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR5007165 | Other | lineage3 | None | ERR4820290 | Other | lineage3 | None | SRR7069473 | Other | lineage4.1.1.2 | None | SRR7069377 | Other | lineage3 | None | SRR7236399 | Other | La1.8.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR10796565 | Other | lineage4.9 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR7070223 | HR-TB | lineage3 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR9971222 | RR-TB | lineage2.2.1.1 | None | SRR22048550 | Other | lineage1.1.3.1 | None | ERR2984782 | Pre-XDR-TB | lineage4.3.3 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR2600562 | MDR-TB | lineage2.2.1;lineage4.8 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR2229760 | Sensitive | lineage4.8 | dk | ERR4816800 | Other | lineage4.8 | gb | SRR1238559 | Other | lineage4.9 | None | SRR6045485 | Other | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR2693227 | Sensitive | lineage4.9 | None | SRR3675513 | Other | lineage4.8 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR7070315 | Other | lineage4.8 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | SRR6045957 | Other | lineage4.9 | None | SRR7070461 | Other | lineage3 | None | SRR7070609 | Other | lineage4.2.2.2 | None | SRR7131123 | Other | lineage4.8 | None | ERR2600609 | Other | lineage4.8 | None | SRR6046117 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR3806588 | Other | lineage6.1.3 | None | SRR7070320 | Other | lineage4.8 | None | SRR7131068 | Other | lineage4.8 | None | SRR7851312 | Other | La1.2 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR7755642 | MDR-TB | lineage4.2.1 | None | ERR2513259 | Other | lineage3 | None | SRR18003038 | Other | lineage2.2.1 | None | ERR867575 | Other | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR6045158 | Other | lineage4.9 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796568 | Other | lineage4.9 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR9971144 | RR-TB | lineage2.2.1 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR16058249 | Sensitive | lineage4.2.2.2 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR7070154 | Other | lineage4.4.1.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR5818677 | Sensitive | lineage1.1.2 | dj | ERR4818128 | Other | lineage4.1.2.1 | None | ERR3283051 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR7069074 | Other | lineage3 | None | SRR7070515 | Other | lineage1.1.3.1 | None | SRR7070602 | Other | lineage4.2.1 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR9971029 | MDR-TB | lineage2.2.2 | None | ERR4821054 | Sensitive | lineage3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR18002987 | Other | lineage2.2.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR8600288 | Other | La1.8.1 | None | SRR6045743 | Other | lineage3 | None | SRR7070327 | Other | lineage1.1.3.1 | None | SRR6153150 | Other | lineage3.1.1 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817069 | RR-TB | None | SRR7070134 | Other | lineage3.1.1 | None | SRR6044769 | Sensitive | lineage1.1.2 | None | SRR6046291 | Other | lineage3 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR6046508 | Sensitive | lineage3.1.2.2 | gb | SRR9971122 | MDR-TB | lineage4.8 | None | SRR6045222 | Other | lineage4.1.2.1 | None | SRR6044815 | Other | lineage4.9 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR4821718 | Sensitive | lineage4.2.2.2 | gb | SRR19303924 | Other | lineage4.1.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR21713567 | Sensitive | lineage4.5 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR7070458 | Sensitive | lineage3 | None | SRR7496523 | Other | lineage4.7 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR7069839 | Other | lineage4.8 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6044787 | Sensitive | lineage4.4 | None | SRR6045778 | Other | lineage3.1 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4.9 | None | SRR7068876 | Other | lineage4.8 | None | ERR10796591 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18213736 | Other | lineage3 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR2600561 | Other | lineage2.2.1;lineage4.8 | None | ERR4796577 | HR-TB | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4816322 | Other | lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | ERR2446580 | Sensitive | lineage3.1.1 | nl | SRR11567803 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | SRR7069033 | Sensitive | lineage4.2.1 | None | SRR6045445 | Other | lineage4.3.1.1 | None | ERR3283046 | Sensitive | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR6045321 | Other | lineage1.1.3.1 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR5818572 | Sensitive | lineage4.2.2.2 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR4972588 | MDR-TB | lineage4.3.2 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR1184012 | Other | lineage4.1.1.3 | None | SRR7069347 | Other | lineage4.1.2.1 | None | ERR3275321 | Sensitive | lineage3.1.1 | nl | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR6046815 | Other | lineage3 | None | ERR4820742 | Sensitive | lineage4.3.4.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR19303819 | Other | lineage4.6.2.2 | None | ERR4820130 | Sensitive | lineage3 | None | ERR4816403 | Other | lineage6.2.3 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR5865106 | MDR-TB | lineage4.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR10796575 | Other | lineage4.3.4;lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR7131183 | MDR-TB | lineage2.2.1 | None | SRR6046210 | Other | lineage4.9 | None | SRR6045614 | Other | lineage4.8 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR7069954 | Other | lineage1.2.2.2 | None | SRR3675552 | Other | lineage4.9 | None | SRR5007163 | Other | lineage3;lineage4.9 | None | SRR7068873 | Other | lineage4.8 | None | ERR10796571 | Other | lineage4.9 | None | SRR7069518 | Other | lineage4.8 | None | ERR10796634 | Other | lineage4.7 | None | SRR7131237 | Other | lineage2.2.1 | None | SRR7070592 | Sensitive | lineage4.8 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR7645973 | Other | lineage4.3.4.1 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | SRR19303784 | Other | lineage4.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR867555 | Other | lineage3 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR3283043 | Other | lineage4.9 | None | SRR1183080 | Other | lineage4.9 | None | SRR6045295 | Other | lineage4.7 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | ERR2514215 | Other | lineage2.2.1 | gb | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | ERR10796553 | Other | lineage4.9 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR4815065 | Sensitive | lineage4.1.2.1 | gb | ERR4769419 | Sensitive | lineage4.9 | None | SAMN02585928 | Other | lineage4.1.1.3 | za | ERR502517 | Other | lineage5.1.1 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | SRR7070153 | Sensitive | lineage4.1.2.1 | None | SRR1181130 | Other | lineage4.1.1.3 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6046679 | Sensitive | lineage3 | gb | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR6046159 | Other | lineage4.8.2 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR7646014 | MDR-TB | lineage4.2.1 | None | SRR1175304 | HR-TB | lineage4.3.3 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | SRR7069959 | Other | lineage4.5 | None | ERR867573 | Other | lineage4.9 | None | SRR19304035 | Other | lineage4.1.2.1 | None | SRR7068863 | Sensitive | lineage4.6.2.2 | None | ERR10796566 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR19303899 | Other | lineage3 | None | SRR6046442 | Other | lineage3 | None | SRR11349159 | MDR-TB | lineage2.2.2 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR4821288 | Other | lineage4.7 | None | SRR7131275 | Other | lineage4.1.2.1 | None | SRR19241806 | Sensitive | lineage4.1.2.1 | None | SRR3675282 | Other | lineage3.1.2.1;lineage4 | None | SRR5007182 | MDR-TB | lineage3 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR11342695 | MDR-TB | lineage4.8 | None | SRR6153151 | Sensitive | lineage1.2.1.2.1 | ca | SRR7068971 | Sensitive | lineage3 | None | SRR7069760 | Other | lineage3 | None | ERR3283008 | Other | lineage4.9 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR1198990 | Other | lineage4.6.1.1 | ug | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4821007 | Other | lineage1.2.2.2 | None | ERR867521 | MDR-TB | lineage2.2.1 | None | SRR1173281 | Other | lineage3 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR6785282 | Other | lineage4.3.3 | None | ERR2027252 | Other | lineage4.2.1.1;lineage4.8 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR5007170 | Other | lineage4.9 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR6045726 | Other | lineage3 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | ERR4814697 | Sensitive | lineage4.4.1.1 | None | ERR9811805 | MDR-TB | lineage4.8 | None | SRR12062551 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR6044952 | Other | lineage4.9 | None | SRR6398013 | Sensitive | lineage4.1.2 | ca | SRR7645924 | Pre-XDR-TB | lineage4.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR6046173 | Sensitive | lineage3 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR7069189 | HR-TB | lineage4.1.2.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR2600613 | Sensitive | lineage4.8 | None | SRR6045986 | Other | lineage3 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | ERR4817915 | Other | lineage4.9 | None | SRR7069441 | Sensitive | lineage4.8 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | SRR7645974 | Other | lineage4.3.4.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR5818694 | Other | lineage3;lineage4.2.2.2 | None | ERR3077969 | Other | La1.3 | None | ERR3275190 | Other | lineage3 | nl | ERR4814690 | Sensitive | lineage2.2.1 | None | SRR7645928 | Other | lineage4.7 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR6044936 | Other | lineage4.6 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR7068875 | Other | lineage3.1.2.2 | None | SRR7068941 | Other | lineage4.8.2 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR10796622 | Other | lineage4.8 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971200 | MDR-TB | lineage4.3.2 | None | SRR10315547 | Sensitive | lineage2.2.1 | None | SRR6046113 | Sensitive | lineage4.1.1.3 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR7070553 | Other | lineage3 | None | SRR6046839 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675565 | Other | lineage4 | None | SRR3675227 | Sensitive | lineage4.9 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR7617847 | Other | La1.8.1 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR7069784 | Other | lineage1.2.2.2 | None | SRR7131161 | Other | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR7070080 | Pre-XDR-TB | lineage3 | None | SRR7069675 | Other | lineage3 | None | SRR6044983 | Other | lineage3.1.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR867569 | Other | lineage4.9 | None | SRR7070446 | Other | lineage3 | None | SRR6045480 | Sensitive | lineage4.1.1.1 | None | SRR19303985 | Sensitive | lineage4.8 | None | ERR5908124 | Other | lineage4.8 | None | SRR7070369 | Other | lineage1.2.2.2 | None | SRR6046818 | Other | lineage4.2.1 | gb | ERR4816569 | Sensitive | lineage4.3.3 | gb | SRR7131196 | Other | lineage4.8 | None | SRR7131028 | Other | lineage4.8 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR171143 | Sensitive | lineage4.9 | za | SRR6045553 | Other | lineage4.1.2.1;lineage4.9 | None | SRR6045613 | Other | lineage3.1.3 | None | ERR2446509 | Other | lineage3 | nl | SRR19303796 | Other | lineage4.3.3 | None | SRR7069687 | Other | lineage4.1.1.3.1 | None | SRR18002997 | Other | lineage2.2.1 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR11349184 | MDR-TB | lineage2.2.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR6045763 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796615 | Other | lineage4.3.3;lineage4.9 | None | ERR4819784 | Other | lineage4.1.2.1 | None | SRR22048478 | Sensitive | lineage4.3.4.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | ERR10796624 | Other | lineage4.8 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4816470 | HR-TB | lineage3 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | SRR7069193 | Other | lineage4.3.1.1 | None | SRR7496471 | Sensitive | lineage4 | None | SRR6855774 | Other | lineage2.2.1 | None | ERR9117699 | Other | lineage4.1.2.1 | None | SRR7070230 | Other | lineage2.2.1.2 | None | SRR7070479 | Other | lineage4.1.2 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | ERR4822150 | Other | lineage4.8 | gb | SRR11342688 | Other | lineage4.2.2.2 | None | SRR6044841 | Other | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR12062547 | HR-TB | lineage2.2.1 | None | ERR867572 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR3675509 | Other | lineage4.9 | None | SRR7069669 | Other | lineage3.1.1 | None | SRR6398010 | Sensitive | lineage4.2.1 | ca | ERR10796596 | Other | lineage4.9 | None | ERR3014599 | Pre-XDR-TB | lineage4.1.2.1 | tn | ERR3276144 | Other | lineage3 | nl | SRR6045496 | Other | lineage6.1.3 | None | ERR4816571 | Sensitive | lineage1.1.2 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR7131032 | Other | lineage2.2.1 | None | SRR7069137 | Other | lineage4.8 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR9117788 | Other | lineage3 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR7131145 | Other | lineage4.1.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR6045928 | Other | lineage4.9 | None | ERR10796582 | Other | lineage4.3.4.1 | None | SRR7069664 | Other | lineage4.1.2 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR10796593 | Other | lineage4.3 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR18213726 | Other | lineage3 | None | ERR4819528 | RR-TB | lineage3 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR2600422 | MDR-TB | lineage2.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4816184 | Other | lineage4.1.2.1 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11349195 | MDR-TB | lineage4.4.1.1 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR7236330 | Other | La1.8.1 | None | SRR7070571 | Sensitive | lineage3 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR10796581 | Other | lineage4.1.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4818272 | Other | lineage4.3.2 | None | SRR7069946 | Other | lineage4.8 | None | SRR11349194 | MDR-TB | lineage4.3.3 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR19304115 | Other | lineage4.1.2.1 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR867574 | Other | lineage4.9 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR5153833 | Other | lineage2.2.1 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR9907785 | RR-TB | lineage4.3.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR6044857 | Other | lineage4.8.1 | gb | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR19304094 | Other | lineage6.1.2 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR5007186 | Sensitive | lineage4.6 | None | SRR18714882 | MDR-TB | lineage2.2.1 | None | SRR7069082 | Other | lineage4.1.2.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4818126 | Other | lineage1.2.2 | None | SRR9971201 | MDR-TB | lineage4.4.1.1.1 | None | ERR10796573 | Other | lineage4.8 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18213680 | Sensitive | lineage3 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR3675389 | Other | lineage4.9 | None | ERR4821704 | Other | lineage4.3.3 | None | SRR6045056 | Other | lineage2.2.1 | gb | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR19304104 | Other | lineage4.8 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR3468613 | Other | La1.8.1 | None | ERR4819876 | Other | lineage4.3.4.2.1 | None | SRR3675582 | Other | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR6153166 | Other | lineage1.2.1.2.1 | ca | SRR19303876 | Other | lineage4.7 | None | SRR11349208 | MDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | ERR4796351 | Sensitive | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | SRR7070329 | Other | lineage3 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR6045125 | Other | lineage1.1.2 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR10796617 | Other | lineage4.3.4.1 | None | SRR18002948 | Other | lineage2.2.1 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | SRR7069030 | Other | lineage3 | None | ERR9117805 | Other | lineage4.3.2 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR7069957 | Sensitive | lineage4.1.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR10796580 | Other | lineage4 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR7069319 | Other | lineage4.5 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4814905 | Sensitive | lineage4.8 | gb | ERR4814976 | Other | lineage4.9 | None | SRR6046064 | Other | lineage3 | gb | ERR5311077 | Other | La1.8.1 | None | SRR19303815 | Other | lineage4.8 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | ERR4769493 | Other | lineage4.9 | None | ERR3468488 | Other | La1.8.1 | None | SRR6045705 | Other | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR867566 | Other | lineage4.9 | None | SRR7069858 | Other | lineage1.2.1.2.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR6046497 | Sensitive | lineage4.9 | None | SRR22048474 | RR-TB | lineage4.8 | None | SRR7070469 | Other | lineage4.3.1.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR4863405 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR7069013 | Other | lineage4.8 | None | ERR4817434 | Other | lineage3 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | SRR7070521 | Other | lineage4.2.1.1 | None | ERR6197042 | Other | lineage4.9 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4818726 | Other | lineage4.1.2.1 | None | SRR6046860 | Other | lineage4.4.1.1 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | SRR11349158 | Other | lineage4.3.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR11349175 | Other | lineage2.2.1 | None | SRR3675252 | Other | lineage1.1.2 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR4811708 | HR-TB | lineage4 | None | SRR3675291 | Sensitive | lineage4.6 | gb | SRR11349196 | MDR-TB | lineage2.2.1 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR19303949 | Other | lineage4.3.3 | None | SRR7131030 | Other | lineage4.1.2.1 | None | ERR4817628 | Sensitive | lineage4.8 | gb | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR7070293 | Other | lineage4.8 | None | ERR4816852 | Other | lineage4.9 | None | ERR3439265 | Sensitive | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4821811 | Sensitive | lineage4.9 | None | SRR6982141 | Other | lineage4.3.3 | None | SRR7069128 | Other | lineage1.2.1.2.1 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR11349209 | MDR-TB | lineage4.1.2.1 | None | SRR7131251 | Other | lineage2.2.1 | None | SRR11342689 | Other | lineage4.1.2.1 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6046246 | Other | lineage3 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | SRR19303917 | Sensitive | lineage2.2.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | SRR18003035 | Other | La1.8.1 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045178 | Other | lineage3 | None | SRR7070176 | Other | lineage3 | None | SRR7070266 | Other | lineage1.1.2 | None | SRR6046376 | Other | lineage3 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR7069251 | Other | lineage3 | None | SRR7131004 | Other | lineage4.6.2.2 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR7645895 | Other | lineage2.2.1 | None | SRR7755652 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR19303960 | Sensitive | lineage4.4.1.2 | None | SRR6257067 | HR-TB | lineage4.2.1 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | ERR11465626 | Sensitive | lineage4.3.4.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4819641 | Other | lineage4.6.2.2 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR2027230 | Other | lineage4.2.2.2 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | SRR7131232 | Pre-XDR-TB | lineage2.2.1 | None | SRR1002691 | HR-TB | lineage4.2.1 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None |
|---|
