ERR4815425
|
Other
|
lineage4.5
|
gb
|
ERR10796615
|
Other
|
lineage4.3.3;lineage4.9
|
None
|
ERR4819533
|
Other
|
lineage1.1.2
|
None
|
SRR18002954
|
Other
|
lineage2.2.1
|
None
|
SRR19303818
|
Other
|
lineage4.3.4.2
|
None
|
ERR4819784
|
Other
|
lineage4.1.2.1
|
None
|
ERR4817628
|
Sensitive
|
lineage4.8
|
gb
|
ERR4817047
|
Sensitive
|
lineage4.2.2.1
|
gb
|
SRR3675461
|
RR-TB
|
lineage4.9
|
None
|
ERR4816604
|
Sensitive
|
lineage4.1.2
|
None
|
SRR11342660
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR867554
|
Other
|
lineage4.3.4.1
|
None
|
SRR6152980
|
HR-TB
|
lineage4.8
|
ca
|
SRR7070293
|
Other
|
lineage4.8
|
None
|
SRR5485526
|
RR-TB
|
lineage4.9
|
None
|
ERR4817464
|
Sensitive
|
lineage3.1.1
|
None
|
ERR4821704
|
Other
|
lineage4.3.3
|
None
|
SRR6046482
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
SRR19304104
|
Other
|
lineage4.8
|
None
|
ERR4819706
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR5087846
|
Other
|
La1.8.1
|
None
|
ERR4816852
|
Other
|
lineage4.9
|
None
|
ERR4816967
|
Other
|
lineage5
|
None
|
ERR4816548
|
HR-TB
|
lineage4.5
|
None
|
ERR4819192
|
Other
|
lineage3
|
None
|
ERR4819522
|
Other
|
lineage4.2.1
|
gb
|
ERR4821811
|
Sensitive
|
lineage4.9
|
None
|
ERR4819368
|
Sensitive
|
lineage4.8
|
gb
|
ERR4821796
|
Other
|
lineage4.1.1.1
|
None
|
SRR7645901
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4798769
|
Other
|
lineage1.1.3.3
|
None
|
SRR7069193
|
Other
|
lineage4.3.1.1
|
None
|
ERR2228890
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR4819041
|
Sensitive
|
lineage4.3.3
|
gb
|
ERR4819096
|
Other
|
lineage4.4.1.1
|
None
|
ERR10796572
|
Other
|
lineage4.3.4.1;lineage4.9
|
None
|
ERR4816667
|
Other
|
lineage2.2.2
|
None
|
ERR4816283
|
Other
|
lineage4.1.2.1
|
None
|
SRR6153166
|
Other
|
lineage1.2.1.2.1
|
ca
|
ERR9117699
|
Other
|
lineage4.1.2.1
|
None
|
ERR4811035
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.5
|
None
|
SRR11342689
|
Other
|
lineage4.1.2.1
|
None
|
SRR11349208
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2027290
|
Other
|
lineage3.1.2.1;lineage4.9
|
None
|
SRR18002903
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6046246
|
Other
|
lineage3
|
None
|
SRR6789624
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR978760
|
RR-TB
|
lineage4.8
|
None
|
SRR7070329
|
Other
|
lineage3
|
None
|
ERR9896153
|
RR-TB
|
lineage4.4.1.1
|
None
|
ERR4815816
|
Other
|
lineage4.5
|
gb
|
ERR4812763
|
Other
|
lineage2.2.1
|
None
|
ERR4816831
|
Other
|
lineage4.1.2.1
|
None
|
SRR18002985
|
HR-TB
|
lineage2.2.1
|
None
|
SRR7069669
|
Other
|
lineage3.1.1
|
None
|
ERR10796596
|
Other
|
lineage4.9
|
None
|
ERR2512849
|
Other
|
lineage1.1.3.1
|
None
|
ERR4814681
|
Other
|
lineage2.2.1
|
None
|
ERR4821334
|
Other
|
lineage4.1.3
|
None
|
ERR4820941
|
HR-TB
|
lineage3
|
gb
|
SRR5818464
|
Other
|
lineage4.9
|
None
|
ERR4818401
|
HR-TB
|
lineage2.2.1
|
gb
|
SRR6046359
|
Other
|
lineage4.7
|
None
|
ERR867541
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR2513682
|
Sensitive
|
lineage3
|
None
|
ERR171142
|
Other
|
lineage3.1.1;lineage4.9
|
None
|
ERR4596902
|
MDR-TB
|
lineage3
|
None
|
ERR5987263
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7070419
|
Other
|
lineage3
|
None
|
ERR10796593
|
Other
|
lineage4.3
|
None
|
SRR11342698
|
RR-TB
|
lineage4.4.1.1
|
None
|
ERR978767
|
RR-TB
|
lineage4.8
|
None
|
ERR4829039
|
RR-TB
|
lineage4.3.1
|
None
|
SRR18002909
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4814905
|
Sensitive
|
lineage4.8
|
gb
|
ERR4814976
|
Other
|
lineage4.9
|
None
|
ERR4815334
|
Other
|
lineage3.1.1
|
None
|
ERR4815467
|
Other
|
lineage3
|
None
|
ERR4819528
|
RR-TB
|
lineage3
|
None
|
ERR4817189
|
Other
|
lineage4.7
|
None
|
ERR4820188
|
Other
|
lineage3
|
gb
|
SRR19303815
|
Other
|
lineage4.8
|
None
|
SRR11349203
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR4820265
|
Other
|
lineage4.1.2.1
|
None
|
SRR6046848
|
Other
|
lineage4.6.5
|
None
|
ERR2446154
|
Sensitive
|
lineage4.4.1.1
|
nl
|
ERR2600422
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR978747
|
Other
|
lineage4.8
|
None
|
SAMN02380982
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4816184
|
Other
|
lineage4.1.2.1
|
None
|
ERR1023509
|
Other
|
lineage4.9
|
None
|
ERR10796631
|
Other
|
lineage4.3.4.2;lineage4.9
|
None
|
ERR2228900
|
Other
|
lineage4.8
|
None
|
SRR5007168
|
Other
|
lineage4.8.2;lineage4.9
|
None
|
SRR7069571
|
Other
|
lineage3
|
None
|
ERR4820410
|
RR-TB
|
lineage3.1.1
|
None
|
ERR126597
|
HR-TB
|
lineage4.4.1.2
|
None
|
ERR4817554
|
Other
|
lineage1.1.1
|
None
|
ERR3445487
|
Other
|
La1.7.X-unk4
|
None
|
ERR4817584
|
Other
|
lineage3;lineage4.9
|
None
|
DRR185000
|
Other
|
lineage1.1.1.1
|
None
|
ERR9285979
|
RR-TB
|
lineage3.1.1
|
None
|
ERR4815301
|
Other
|
lineage4.4.2
|
None
|
ERR2886463
|
Sensitive
|
lineage2.2.1
|
None
|
SRR11342644
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR7131182
|
Other
|
lineage4.1.2.1
|
None
|
SRR14801652
|
HR-TB
|
lineage4.3.3
|
None
|
ERR3275615
|
Sensitive
|
lineage4.4.1.1
|
nl
|
ERR10796578
|
Other
|
lineage2.2.1
|
None
|
ERR911929
|
Other
|
lineage4.8
|
None
|
SRR18002875
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR18002961
|
Other
|
lineage2.2.1
|
None
|
SRR18002964
|
Other
|
lineage2.2.1
|
None
|
ERR10796553
|
Other
|
lineage4.9
|
None
|
SRR5485511
|
RR-TB
|
lineage4.9
|
None
|
SRR18003032
|
Other
|
lineage2.2.1
|
None
|
ERR4815065
|
Sensitive
|
lineage4.1.2.1
|
gb
|
ERR2514215
|
Other
|
lineage2.2.1
|
gb
|
ERR6197029
|
Other
|
lineage4.7
|
None
|
ERR978734_ERR978733_ERR978735
|
RR-TB
|
lineage4.8
|
None
|
ERR978746
|
RR-TB
|
lineage4.8
|
None
|
SRR11342676
|
HR-TB
|
lineage4.6.2.2
|
None
|
ERR4820397
|
Other
|
lineage4.9
|
None
|
ERR4817294
|
Other
|
lineage4.1.2
|
None
|
ERR4818407
|
Other
|
lineage4.3.2
|
None
|
ERR4817941
|
Other
|
lineage4.8
|
gb
|
ERR4818128
|
Other
|
lineage4.1.2.1
|
None
|
ERR502470
|
RR-TB
|
lineage4.9
|
None
|
ERR4820690
|
Sensitive
|
lineage4.1.1
|
gb
|
ERR2512443
|
Sensitive
|
lineage4.8
|
gb
|
ERR037504
|
Other
|
lineage4.9.1
|
None
|
ERR502517
|
Other
|
lineage5.1.1
|
None
|
ERR2513924
|
Sensitive
|
lineage4.8
|
None
|
ERR4816510
|
Other
|
lineage4.1.2.1
|
None
|
ERR2229147
|
Other
|
lineage4.8
|
None
|
ERR978726_ERR978727
|
RR-TB
|
lineage4.8
|
None
|
SRR7070181
|
Other
|
lineage3
|
None
|
SRR1062871
|
RR-TB
|
lineage4.3.4.2.1
|
None
|
ERR2514702
|
Sensitive
|
lineage4.1.2.1
|
gb
|
SRR18002998
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR7131122
|
Other
|
lineage2.2.1
|
None
|
SRR7131195
|
Other
|
lineage2.2.1
|
None
|
ERR867573
|
Other
|
lineage4.9
|
None
|
ERR4821222
|
Other
|
lineage4.3.2.1
|
None
|
ERR4815815
|
Sensitive
|
lineage4.9
|
None
|
SRR1062918
|
Other
|
lineage3
|
None
|
ERR9117760
|
HR-TB
|
lineage4.3
|
None
|
SAMEA3501070
|
RR-TB
|
lineage4.8
|
None
|
ERR4818507
|
Other
|
lineage4.1.2.1
|
None
|
SRR18002987
|
Other
|
lineage2.2.1
|
None
|
ERR4816093
|
Other
|
lineage1.1.3
|
None
|
ERR4820891
|
Sensitive
|
lineage4.9
|
gb
|
SAMEA3501046
|
RR-TB
|
lineage4.8
|
None
|
SRR7070144
|
Other
|
lineage4.8
|
None
|
ERR4821761
|
Other
|
lineage3
|
gb
|
ERR4818763
|
Other
|
lineage3
|
gb
|
SRR7131275
|
Other
|
lineage4.1.2.1
|
None
|
SAMEA3501067
|
RR-TB
|
lineage4.8
|
None
|
SRR1049582
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR10869285
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR7585400
|
MDR-TB
|
lineage3
|
None
|
SRR7645971
|
Other
|
lineage2.2.1
|
None
|
SRR11342695
|
MDR-TB
|
lineage4.8
|
None
|
SRR5485525
|
RR-TB
|
lineage4.9
|
None
|
SRR9971046
|
MDR-TB
|
lineage4.8
|
None
|
ERR10796635
|
Other
|
lineage4.8
|
None
|
SRR1049559
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4816422
|
Sensitive
|
lineage4.1.1.1
|
gb
|
SRR18003024
|
RR-TB
|
lineage2.2.1
|
None
|
SRR7131297
|
Other
|
lineage1.2.1.2
|
None
|
SRR7755649
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR978734
|
RR-TB
|
lineage4.8
|
None
|
SRR12062533
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR9971372
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2513160
|
Pre-XDR-TB
|
lineage3
|
gb
|
SRR19303907
|
Other
|
lineage4.8
|
None
|
SRR7070195
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR1049726
|
Other
|
lineage4.1.2.1;lineage4.4.1.1
|
None
|
SRR6044952
|
Other
|
lineage4.9
|
None
|
SRR6045909
|
Other
|
lineage4.8.1
|
None
|
SRR18911231
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR7069839
|
Other
|
lineage4.8
|
None
|
SRR7646018
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR10315486
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3675389
|
Other
|
lineage4.9
|
None
|
SRR6046020
|
Other
|
lineage3
|
None
|
ERR978693
|
Other
|
lineage4.8
|
None
|
ERR3468613
|
Other
|
La1.8.1
|
None
|
SRR16156188
|
Sensitive
|
lineage4.9
|
None
|
SRR6982141
|
Other
|
lineage4.3.3
|
None
|
ERR4769517
|
Other
|
La1.3
|
None
|
SRR5818630
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4821417
|
Other
|
lineage1.1.3.1
|
None
|
ERR2512606
|
HR-TB
|
lineage3
|
None
|
SAMN02380990
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6359069
|
Sensitive
|
lineage4.9
|
None
|
ERR2512423
|
Other
|
lineage4.1.1.3
|
None
|
ERR4817382
|
Sensitive
|
lineage4.9
|
gb
|
SRR3675582
|
Other
|
lineage4.9
|
None
|
ERR502473
|
RR-TB
|
lineage4.9
|
None
|
ERR4814841
|
Other
|
lineage4.1
|
None
|
ERR736820
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR1184308
|
Sensitive
|
lineage4.9
|
None
|
SRR7070479
|
Other
|
lineage4.1.2
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR6046484
|
Other
|
lineage1.2.2.2
|
None
|
ERR4822150
|
Other
|
lineage4.8
|
gb
|
SRR11342688
|
Other
|
lineage4.2.2.2
|
None
|
SRR12708411
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR867540
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11342653
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18003007
|
MDR-TB
|
lineage4.5
|
None
|
ERR4818583
|
Other
|
lineage4.3.3
|
None
|
SAMEA3450033
|
Other
|
lineage4.8
|
None
|
ERR4821879
|
Other
|
lineage4.6.1.1
|
None
|
SRR18003046
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR20969542
|
Other
|
lineage4.4.2
|
None
|
SRR6045125
|
Other
|
lineage1.1.2
|
None
|
ERR4821245
|
Other
|
lineage4.1.2.1
|
None
|
ERR4814639
|
HR-TB
|
lineage4.9
|
None
|
ERR10796617
|
Other
|
lineage4.3.4.1
|
None
|
ERR2514645
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR18002948
|
Other
|
lineage2.2.1
|
None
|
SRR18002967
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675509
|
Other
|
lineage4.9
|
None
|
SRR7069030
|
Other
|
lineage3
|
None
|
ERR4814714
|
Other
|
lineage3
|
None
|
ERR4820478
|
Sensitive
|
lineage3.1.3
|
None
|
SRR6397815
|
Other
|
lineage4.4.1.1
|
None
|
DRR184629
|
Other
|
lineage2.2.1
|
None
|
ERR4769436
|
Other
|
La1.3
|
None
|
SRR6367397
|
Other
|
lineage4.1.2.1
|
None
|
SRR5341267
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR11342643
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR10796558
|
Sensitive
|
lineage4.3.4.1;lineage4.9
|
None
|
SRR6045928
|
Other
|
lineage4.9
|
None
|
ERR2514430
|
Other
|
lineage3.1.2;lineage4.1.1.3.1
|
None
|
SRR5485510
|
RR-TB
|
lineage4.9
|
None
|
SRR18002881
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4815909
|
Other
|
lineage4.8
|
None
|
ERR4818173
|
Other
|
lineage2.2.1
|
None
|
ERR4829337
|
Sensitive
|
lineage4.8
|
None
|
ERR978766
|
RR-TB
|
lineage4.8
|
None
|
SRR7535047
|
RR-TB
|
lineage4.6.1.1
|
None
|
ERR4819265
|
HR-TB
|
lineage4.3.4.1
|
None
|
ERR2027230
|
Other
|
lineage4.2.2.2
|
None
|
ERR2027255
|
HR-TB
|
lineage4.4.1.1
|
None
|
ERR4814496
|
Sensitive
|
lineage4.1.2
|
None
|
ERR4817907
|
Sensitive
|
lineage3
|
gb
|
ERR9119120
|
Other
|
lineage4.8
|
None
|
ERR867522
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4822176
|
Other
|
lineage4.1.1.2
|
None
|
SRR11342638
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR3675449
|
Other
|
M.canetti;lineage4.9
|
None
|
ERR4819640
|
RR-TB
|
lineage4.6.2.2
|
None
|
ERR4820075
|
Other
|
lineage4.1.2.1
|
None
|
ERR10796554
|
Sensitive
|
lineage4.1.2
|
None
|
SRR18002994
|
MDR-TB
|
lineage4.2.2
|
None
|
SRR7070154
|
Other
|
lineage4.4.1.1
|
None
|
ERR4818785
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR752012
|
HR-TB
|
lineage1.1.1.1
|
None
|
ERR978735
|
Other
|
lineage4.8
|
None
|
DRR188816
|
Sensitive
|
lineage4.2.2
|
None
|
SRR1062928
|
Other
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR4820833
|
Other
|
lineage3;lineage4.9
|
None
|
ERR4818671
|
Other
|
lineage4.8
|
gb
|
ERR4819864
|
RR-TB
|
lineage1.1.3.1
|
None
|
ERR4821958
|
Other
|
lineage4.3.3
|
gb
|
SRR6046463
|
Other
|
lineage4.4.1.1
|
None
|
ERR4815104
|
Sensitive
|
lineage4.8
|
None
|
ERR867571
|
Other
|
lineage4.9
|
None
|
ERR4821488
|
Sensitive
|
lineage4.1.3
|
None
|
ERR1023502
|
MDR-TB
|
lineage2;lineage4
|
None
|
ERR2515032
|
Other
|
lineage3
|
None
|
SRR6045384
|
Other
|
lineage4.1.2.1
|
None
|
SRR1238558
|
Other
|
lineage4.9
|
None
|
ERR323048
|
Sensitive
|
lineage4.9
|
None
|
ERR10796598
|
Other
|
lineage4.9
|
None
|
ERR4821572
|
Sensitive
|
lineage2.1
|
None
|
ERR2510804
|
Other
|
lineage2.2.1
|
None
|
SRR9971246
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR867525
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR9971029
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR11465490
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4814767
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4819863
|
RR-TB
|
lineage4.9
|
None
|
ERR978754
|
RR-TB
|
lineage4.8
|
None
|
ERR4814896
|
Other
|
lineage2.2.1.1
|
None
|
ERR4821360
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR6046442
|
Other
|
lineage3
|
None
|
SRR7070157
|
Other
|
lineage4.1.1.3.1
|
None
|
SRR6153150
|
Other
|
lineage3.1.1
|
None
|
SRR18003023
|
Other
|
lineage2.2.1
|
None
|
ERR10762297
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR18002872
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7070134
|
Other
|
lineage3.1.1
|
None
|
ERR978757
|
RR-TB
|
lineage4.8
|
None
|
SRR11349207
|
RR-TB
|
lineage2.2.1
|
None
|
SRR6046291
|
Other
|
lineage3
|
None
|
SRR6046766
|
Other
|
lineage3.1.1
|
None
|
ERR4817060
|
Other
|
|
None
|
SRR7068971
|
Sensitive
|
lineage3
|
None
|
SRR9971122
|
MDR-TB
|
lineage4.8
|
None
|
SRR9971197
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR9971333
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4814554
|
Sensitive
|
lineage4.1
|
None
|
ERR4818065
|
Other
|
lineage4.1.2.1
|
None
|
SRR11342646
|
HR-TB
|
lineage3
|
None
|
ERR4820907
|
Other
|
lineage4.1.2.1
|
gb
|
ERR4821007
|
Other
|
lineage1.2.2.2
|
None
|
SRR5341365
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR10796555
|
Other
|
lineage4.1.2.1
|
None
|
ERR10796629
|
Other
|
lineage4.1;lineage4.9
|
None
|
ERR2514514
|
Other
|
lineage3
|
gb
|
ERR4809049
|
Sensitive
|
lineage4.1.2
|
za
|
SRR10321138
|
Other
|
La3
|
None
|
SRR11342671
|
RR-TB
|
lineage4.1.3
|
None
|
SRR11342673
|
RR-TB
|
lineage4.3.4.2
|
None
|
SRR5007170
|
Other
|
lineage4.9
|
None
|
SRR5818672
|
Other
|
lineage1.2.2.2
|
None
|
ERR017781
|
Other
|
lineage3
|
None
|
ERR4811101
|
Other
|
lineage4.4.2
|
None
|
ERR4818003
|
Other
|
lineage1.2.1.2.1
|
gb
|
ERR4819980
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4820019
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR978694
|
Other
|
lineage4.8
|
None
|
ERR9811805
|
MDR-TB
|
lineage4.8
|
None
|
SRR11342693
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR4769530
|
RR-TB
|
lineage4.9
|
None
|
SRR18002887
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR18002981
|
Other
|
lineage2.2.1
|
None
|
ERR4820777
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4821154
|
Sensitive
|
lineage2.2.1
|
gb
|
ERR867544
|
Other
|
lineage4.9
|
None
|
ERR867570
|
RR-TB
|
lineage4.9
|
None
|
ERR10796592
|
Other
|
lineage4.9
|
None
|
SRR1049725
|
Other
|
lineage4.1.2.1;lineage4.4.1
|
None
|
SRR6046701
|
Other
|
lineage3.1.2.2
|
None
|
ERR4817398
|
Other
|
lineage3.1.1
|
None
|
ERR4818897
|
Other
|
lineage4.1.2.1
|
gb
|
SRR7069441
|
Sensitive
|
lineage4.8
|
None
|
SRR5818386
|
Other
|
lineage4.9
|
None
|
SRR6045516
|
Other
|
lineage3.1.1
|
None
|
SRR22424787
|
Sensitive
|
lineage4.9
|
None
|
ERR4821769
|
Other
|
lineage4.1.2.1
|
None
|
ERR4972567
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4818570
|
Other
|
lineage4.3.3
|
None
|
ERR2515077
|
Sensitive
|
lineage3
|
gb
|
ERR4816425
|
Other
|
lineage2.2.2
|
None
|
ERR2514834
|
Sensitive
|
lineage4.7
|
None
|
ERR502478
|
RR-TB
|
lineage4.9
|
None
|
SRR6044841
|
Other
|
lineage4.9
|
None
|
SRR18003047
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2514181
|
Other
|
lineage1.2.1.2.1
|
None
|
ERR10796595
|
Other
|
lineage4.9
|
None
|
ERR867572
|
Other
|
lineage4.9
|
None
|
SRR11342636
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR867523
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR12062542
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18003012
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4818432
|
HR-TB
|
lineage4.5
|
gb
|
SRR5818449
|
MDR-TB
|
lineage4.9
|
None
|
SRR6045496
|
Other
|
lineage6.1.3
|
None
|
ERR4821127
|
HR-TB
|
lineage4.6.2.2
|
gb
|
SRR6046177
|
Other
|
lineage3.1.2
|
None
|
SRR7069137
|
Other
|
lineage4.8
|
None
|
SRR6046376
|
Other
|
lineage3
|
None
|
SRR7069251
|
Other
|
lineage3
|
None
|
ERR9117788
|
Other
|
lineage3
|
None
|
SRR6046668
|
Sensitive
|
lineage1.1.2
|
gb
|
SRR7131145
|
Other
|
lineage4.1.2.1
|
None
|
SRR5007193
|
RR-TB
|
lineage4.1.1.3.1
|
None
|
SRR7755652
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.2.1
|
None
|
ERR4817730
|
Sensitive
|
lineage4.2.1.1
|
gb
|
SRR5818429
|
Sensitive
|
lineage4.9
|
None
|
SRR5818448
|
Other
|
lineage4.9
|
None
|
ERR10796583
|
Other
|
lineage2.2.1
|
None
|
ERR3276170
|
Other
|
lineage4.1.2.1
|
nl
|
SRR7069319
|
Other
|
lineage4.5
|
None
|
SRR6045290
|
RR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR18213726
|
Other
|
lineage3
|
None
|
ERR4815394
|
Sensitive
|
lineage4.2.1
|
None
|
ERR2513056
|
HR-TB
|
lineage4.1.2.1
|
gb
|
ERR2514279
|
Sensitive
|
lineage3
|
gb
|
ERR5311077
|
Other
|
La1.8.1
|
None
|
ERR4818988
|
Other
|
lineage1.2.2
|
None
|
ERR978767_ERR978765_ERR978766
|
RR-TB
|
lineage4.8
|
None
|
ERR2228899
|
Other
|
lineage4.8
|
None
|
ERR3468488
|
Other
|
La1.8.1
|
None
|
SRR18002873
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.2.2;lineage4.4.2
|
None
|
SRR11342685
|
HR-TB
|
lineage4.4.1.1
|
None
|
ERR4819546
|
HR-TB
|
lineage3
|
None
|
ERR4821746
|
Sensitive
|
lineage4.4.1.1
|
gb
|
SRR7236330
|
Other
|
La1.8.1
|
None
|
SRR7070571
|
Sensitive
|
lineage3
|
None
|
SRR11342696
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR6044904
|
Other
|
lineage3
|
None
|
SRR1180446
|
Other
|
lineage4.9
|
None
|
ERR10796552
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR5485603
|
Other
|
lineage4.9
|
None
|
SRR18002935
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4820484
|
Sensitive
|
lineage4.8
|
None
|
SRR1173740
|
Other
|
lineage3;lineage4
|
None
|
ERR4818522
|
Other
|
lineage3
|
None
|
ERR4814748
|
Other
|
lineage4.8
|
None
|
ERR10796568
|
Other
|
lineage4.9
|
None
|
SRR11349153
|
RR-TB
|
lineage4.1.1.1
|
None
|
ERR4821679
|
Other
|
lineage4.3.3
|
None
|
SRR18002980
|
Other
|
lineage2.2.1
|
None
|
ERR4821341
|
Other
|
lineage4.3.4.1
|
None
|
SRR11342647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR18002988
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18002999
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4819324
|
Other
|
lineage4.8
|
gb
|
ERR4818691
|
Other
|
lineage4.8
|
None
|
ERR4819011
|
Other
|
lineage3.1.2.1
|
None
|
ERR2228965
|
Other
|
lineage4.8
|
None
|
SRR3675527
|
Other
|
lineage4.9
|
None
|
SRR5485522
|
RR-TB
|
lineage4.9
|
None
|
ERR2509886
|
Other
|
lineage3
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
SRR6982246
|
Sensitive
|
lineage4.1.2;lineage4.9
|
None
|
SRR7069074
|
Other
|
lineage3
|
None
|
SRR6045422
|
Other
|
lineage4.3.1.1
|
None
|
SRR7645972
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR18002908
|
Other
|
lineage2.2.1
|
None
|
SRR6046159
|
Other
|
lineage4.8.2
|
None
|
SRR6045887
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR5709926
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4815502
|
Other
|
lineage4.1
|
None
|
SRR6046737
|
Other
|
lineage4.9
|
None
|
SRR7069027
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4829277
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4821492
|
HR-TB
|
lineage3
|
None
|
SRR9971168
|
Other
|
lineage4.3.2.1
|
None
|
ERR4817917
|
Other
|
lineage2.2.1
|
None
|
ERR10796566
|
Other
|
lineage4.9
|
None
|
SRR11342655
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4820586
|
Other
|
lineage3
|
gb
|
ERR5979454
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4819491
|
Other
|
lineage4.1.2.1
|
None
|
SRR11342664
|
MDR-TB
|
lineage2.2.2
|
None
|
SAMEA3501052
|
RR-TB
|
lineage4.8
|
None
|
SRR7070548
|
Other
|
lineage4.1.2.1
|
None
|
ERR4822034
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR19303899
|
Other
|
lineage3
|
None
|
ERR10796576
|
Sensitive
|
lineage4.9
|
None
|
ERR10796636
|
Other
|
lineage4.1.2.1
|
None
|
ERR10796577
|
Other
|
lineage4.9
|
None
|
ERR6359070
|
Sensitive
|
lineage4.9
|
None
|
SRR1735598
|
RR-TB
|
lineage4.9
|
None
|
ERR4821288
|
Other
|
lineage4.7
|
None
|
ERR4817069
|
RR-TB
|
|
None
|
ERR2514692
|
Other
|
|
None
|
SRR1173770
|
Other
|
lineage4.9
|
None
|
ERR2514565
|
Sensitive
|
lineage3.1.2.1
|
gb
|
ERR4818851
|
RR-TB
|
lineage4.4.1.1
|
None
|
ERR867521
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1173281
|
Other
|
lineage3
|
None
|
ERR4815452
|
Other
|
lineage4.3.3
|
None
|
ERR4818977
|
Other
|
lineage4.1.2.1
|
None
|
ERR4819615
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR4820746
|
Other
|
lineage3
|
None
|
ERR4820748
|
Other
|
lineage3
|
None
|
ERR4820846
|
RR-TB
|
lineage4.6.2.2
|
gb
|
SRR1181256
|
Other
|
lineage4.9
|
None
|
SRR18003002
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR19325518
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1140724
|
Other
|
lineage2.2.1
|
None
|
SRR18002956
|
Other
|
lineage2.2.1
|
None
|
SRR18003045
|
Other
|
lineage2.2.1
|
None
|
ERR10796599
|
Other
|
lineage4.8
|
None
|
ERR10796597
|
Other
|
lineage4.3.3
|
None
|
SRR11462861
|
Other
|
La1.8.1
|
None
|
ERR2513405
|
Other
|
lineage2.2.1
|
None
|
SRR12708406
|
HR-TB
|
lineage2.2.1;lineage4.9
|
None
|
ERR4815268
|
Sensitive
|
lineage4.8
|
None
|
SRR22424778
|
RR-TB
|
lineage2.2.1.1
|
None
|
SRR6046343
|
Other
|
lineage2.2.1
|
None
|
SRR7069158
|
Other
|
lineage3
|
None
|
SRR7131287
|
Other
|
lineage2.2.1.1
|
None
|
ERR10796627
|
Other
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR6045986
|
Other
|
lineage3
|
None
|
ERR978727
|
Other
|
lineage4.8
|
None
|
SRR10315693
|
RR-TB
|
lineage4.1.2
|
None
|
ERR4815362
|
Sensitive
|
lineage1.1.2
|
None
|
ERR4815471
|
Sensitive
|
lineage4.9
|
None
|
ERR4815811
|
Other
|
lineage4.2.1.1
|
None
|
ERR4816745
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7069097
|
Other
|
lineage3.1.2.1
|
None
|
ERR2514261
|
Other
|
lineage3
|
None
|
ERR11465830
|
Sensitive
|
lineage4.9
|
None
|
ERR10796561
|
Other
|
lineage4.3.2
|
None
|
ERR10796591
|
Other
|
lineage4.9
|
None
|
SRR18002947
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18213736
|
Other
|
lineage3
|
None
|
ERR978751
|
Other
|
lineage4.8
|
None
|
ERR4819314
|
Other
|
lineage1.1.1
|
None
|
SAMEA3501063
|
RR-TB
|
lineage4.8
|
None
|
ERR2514655
|
Sensitive
|
lineage3
|
None
|
SRR12062493
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
ERR2027291
|
Sensitive
|
lineage3.1.3
|
None
|
ERR4024582
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1049560
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4820151
|
Other
|
lineage4.8
|
None
|
SRR7755657
|
Other
|
lineage4.8
|
None
|
SRR1049675
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6044936
|
Other
|
lineage4.6
|
None
|
ERR2514173
|
Other
|
lineage4.5
|
gb
|
ERR2514801
|
Other
|
lineage1.1.3.2
|
gb
|
ERR4829835
|
HR-TB
|
lineage4.8
|
it
|
ERR4815780
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4820968
|
Sensitive
|
lineage4.1.2.1
|
gb
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
SRR5485513
|
RR-TB
|
lineage4.9
|
None
|
ERR978755
|
RR-TB
|
lineage4.8
|
None
|
ERR4816866
|
Other
|
lineage2.2.1
|
None
|
ERR10796562
|
Other
|
lineage4.3.4.1
|
None
|
ERR4820290
|
Other
|
lineage3
|
None
|
ERR978761
|
Other
|
lineage4.8
|
None
|
SRR15315797
|
RR-TB
|
lineage2.2.1
|
None
|
ERR911929_ERR911930
|
Other
|
lineage4.8
|
None
|
ERR2027209
|
MDR-TB
|
lineage1.2.1.1
|
None
|
ERR10796565
|
Other
|
lineage4.9
|
None
|
SRR18003004
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR18003009
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR867527
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7070223
|
HR-TB
|
lineage3
|
None
|
ERR978765
|
RR-TB
|
lineage4.8
|
None
|
SRR18002891
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR9971200
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR10315556
|
Sensitive
|
lineage2.2.1
|
None
|
SRR7069931
|
Other
|
lineage4.2.2.2
|
None
|
ERR4816310
|
HR-TB
|
lineage4.6.1.2
|
None
|
SRR11342649
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4814362
|
Other
|
lineage4.8
|
None
|
ERR4815792
|
Other
|
lineage4.1.2.1
|
None
|
ERR4819017
|
Other
|
lineage3
|
None
|
ERR4816462
|
Other
|
lineage4.1.2.1
|
None
|
ERR4819518
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR502474
|
RR-TB
|
lineage4.9
|
None
|
SRR6046839
|
Other
|
lineage4.9
|
None
|
ERR4829816
|
RR-TB
|
lineage4.4.1.1
|
None
|
SRR1062919
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675265
|
Other
|
lineage4
|
None
|
SRR1140753
|
RR-TB
|
lineage4.3.4.2.1
|
None
|
SRR22424765
|
HR-TB
|
lineage4.8
|
None
|
SRR18913750
|
Other
|
lineage2.2.1
|
None
|
ERR9119733
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8774355
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10796564
|
Other
|
lineage4.3.3
|
None
|
ERR978726
|
RR-TB
|
lineage4.8
|
None
|
SRR7755655
|
Other
|
lineage4.1.2.1
|
None
|
ERR4818393
|
RR-TB
|
lineage3;lineage4
|
None
|
ERR4816717
|
RR-TB
|
lineage3.1.2.1
|
None
|
SRR6045957
|
Other
|
lineage4.9
|
None
|
ERR4818530
|
Sensitive
|
lineage2.2.1
|
gb
|
ERR6866241
|
Other
|
lineage4.3.2
|
None
|
ERR4814415
|
Other
|
lineage3.1.1
|
None
|
ERR4815994
|
Sensitive
|
lineage3
|
gb
|
ERR7801175
|
HR-TB
|
lineage4.6.5
|
None
|
SRR7131123
|
Other
|
lineage4.8
|
None
|
SAMEA3501073
|
RR-TB
|
lineage4.8
|
None
|
ERR4821172
|
RR-TB
|
lineage4.9
|
None
|
ERR4821408
|
Sensitive
|
lineage4.1.2
|
None
|
SRR7645899
|
Other
|
lineage2.2.1
|
None
|
SRR7069835
|
Other
|
lineage2.2.1
|
None
|
ERR10796633
|
Other
|
lineage4.3.4.2
|
None
|
ERR4829208
|
Other
|
lineage4.8
|
None
|
SRR7069784
|
Other
|
lineage1.2.2.2
|
None
|
SRR7070080
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4817834
|
Sensitive
|
lineage1.1.2
|
gb
|
SRR7645973
|
Other
|
lineage4.3.4.1
|
None
|
SRR10315707
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR978752
|
Other
|
lineage4.8
|
None
|
SRR6044983
|
Other
|
lineage3.1.1
|
None
|
ERR4817526
|
Other
|
lineage4.4.1.1
|
gb
|
ERR10796559
|
Other
|
lineage4.9
|
None
|
ERR4818050
|
Sensitive
|
lineage4.6.2.2
|
None
|
SRR5818435
|
Sensitive
|
lineage4.9
|
None
|
ERR867569
|
Other
|
lineage4.9
|
None
|
ERR10796581
|
Other
|
lineage4.1.2
|
None
|
SRR11342642
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2027257
|
Other
|
lineage4.1.2.1
|
None
|
ERR4815898
|
Other
|
lineage3
|
None
|
ERR5908124
|
Other
|
lineage4.8
|
None
|
ERR3275941
|
RR-TB
|
lineage4.3
|
nl
|
ERR4863405
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.1.2.1
|
None
|
SRR11342682
|
Other
|
lineage4.1.2
|
None
|
SRR6045613
|
Other
|
lineage3.1.3
|
None
|
SRR7755645
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7070521
|
Other
|
lineage4.2.1.1
|
None
|
ERR4814952
|
Sensitive
|
lineage3
|
None
|
ERR4816964
|
Sensitive
|
lineage4.9
|
None
|
ERR270777
|
HR-TB
|
lineage4.1.2
|
None
|
SRR19304094
|
Other
|
lineage6.1.2
|
None
|
SRR3675230
|
Other
|
lineage3;lineage4
|
None
|
SRR11342651
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR978755_ERR978756_ERR978754_ERR978757
|
RR-TB
|
lineage4.8
|
None
|
ERR4819636
|
Other
|
lineage3.1.2
|
None
|
SRR1062880
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR2513904
|
Other
|
lineage3.1.2.2
|
gb
|
ERR6197043
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4820328
|
Other
|
lineage3
|
gb
|
SRR6044873
|
Other
|
lineage4.1.1.3.1
|
None
|
SRR6045778
|
Other
|
lineage3.1
|
None
|
SRR023487
|
RR-TB
|
lineage2.2.1
|
None
|
SRR1140736
|
Other
|
lineage4.1.2.1
|
None
|
SRR19304057
|
Sensitive
|
lineage4.4.1.2
|
None
|
ERR4798823
|
HR-TB
|
lineage4
|
None
|
ERR4816322
|
Other
|
lineage4.9
|
None
|
ERR4816968
|
Other
|
lineage4.2.1
|
gb
|
ERR4817964
|
RR-TB
|
lineage4.1.2.1
|
gb
|
ERR4818265
|
Other
|
lineage4.1.2.1
|
None
|
ERR4818825
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR1049674
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1173170
|
Other
|
lineage4.9
|
None
|
SRR11342662
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR1140712
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4816086
|
Sensitive
|
lineage4.2.2.2
|
None
|
ERR4816690
|
Other
|
|
None
|
ERR4816762
|
Sensitive
|
lineage4.9
|
None
|
ERR4816856
|
Other
|
lineage4.1.2.1
|
None
|
ERR4816868
|
Other
|
lineage4.4.1.1
|
None
|
ERR10796560
|
Other
|
lineage4.9
|
None
|
ERR978750
|
RR-TB
|
lineage4.8
|
None
|
ERR4820026
|
Other
|
lineage3
|
None
|
SRR7131149
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR7645906
|
Other
|
lineage2.2.1
|
None
|
SRR5007204
|
Other
|
lineage4.1.2.1
|
None
|
SRR6045159
|
Other
|
lineage3.1.1
|
None
|
SRR11342680
|
Other
|
lineage4.8
|
None
|
SRR6045424
|
Other
|
lineage1.1.2
|
None
|
SRR6045359
|
Sensitive
|
lineage4.9
|
None
|
SRR22048536
|
Other
|
lineage4.3.3
|
None
|
SRR7068875
|
Other
|
lineage3.1.2.2
|
None
|
ERR978733
|
RR-TB
|
lineage4.8
|
None
|
SRR7068941
|
Other
|
lineage4.8.2
|
None
|
ERR4818104
|
Sensitive
|
lineage4.1.2
|
gb
|
SRR6046275
|
Other
|
lineage3.1.1;lineage4
|
None
|
ERR4818646
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4816549
|
Other
|
lineage2.2.1
|
None
|
SRR7069922
|
Other
|
lineage2.2.1
|
None
|
ERR2228910
|
Other
|
lineage4.8
|
None
|
ERR978746_ERR978747_ERR978748
|
RR-TB
|
lineage4.8
|
None
|
ERR9117812
|
Other
|
lineage4.3.1.1
|
None
|
ERR4822261
|
RR-TB
|
lineage2.2.1
|
None
|
SRR5818414
|
Other
|
lineage4.9
|
None
|
SRR6046113
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR5818395
|
Sensitive
|
lineage4.9
|
None
|
SRR11342658
|
RR-TB
|
lineage4.1.2
|
None
|
SRR11342668
|
Pre-XDR-TB
|
lineage4.8.1
|
None
|
SRR11349191
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4821331
|
HR-TB
|
lineage4.8
|
None
|
ERR4818663
|
Other
|
lineage3
|
None
|
ERR867568
|
Other
|
lineage2.2.1;lineage4
|
None
|
ERR4819766
|
Other
|
lineage4.4.1.1
|
None
|
ERR4819772
|
Other
|
lineage1.1.3.1
|
None
|
ERR4819948
|
Other
|
lineage4.4.1.1
|
None
|
SRR11342640
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2513401
|
HR-TB
|
lineage3
|
None
|
SRR18002941
|
RR-TB
|
lineage2.2.1
|
None
|
SRR1238559
|
Other
|
lineage4.9
|
None
|
ERR4816800
|
Other
|
lineage4.8
|
gb
|
ERR4815143
|
HR-TB
|
lineage4.2.2.2
|
None
|
SRR19303820
|
RR-TB
|
lineage4.8
|
None
|
ERR2515055
|
Sensitive
|
lineage3
|
None
|
SRR21727760
|
Other
|
lineage2.2.1
|
None
|
SRR7070553
|
Other
|
lineage3
|
None
|
ERR978694_ERR978693
|
Other
|
lineage4.8
|
None
|
ERR4820720
|
Other
|
lineage4.1.2.1
|
None
|
SRR6046852
|
MDR-TB
|
lineage3
|
None
|
SRR18002974
|
Other
|
lineage2.2.1
|
None
|
SRR3675565
|
Other
|
lineage4
|
None
|
ERR6197023
|
MDR-TB
|
lineage4.3.4.2;lineage4.7
|
None
|
ERR751345
|
Other
|
lineage5.1.1
|
None
|
ERR10796594
|
Other
|
lineage4.9
|
None
|
ERR10796640
|
Other
|
lineage4.1.2.1
|
None
|
ERR9117827
|
Other
|
lineage1.2.2.2
|
None
|
ERR4818498
|
Other
|
lineage3.1.2.1
|
gb
|
SRR18002933
|
Other
|
lineage2.2.1
|
None
|
ERR10796628
|
Other
|
lineage4.3.3
|
None
|
ERR2513830
|
RR-TB
|
lineage4.8
|
None
|
SRR6045071
|
Other
|
lineage4.3.1.1
|
None
|
SRR7131183
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6046616
|
Other
|
lineage4.3.1.1
|
None
|
SRR6045843
|
Other
|
lineage4.2.2.2
|
None
|
SRR6982239
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR4819456
|
Other
|
lineage4.8
|
None
|
SRR6046210
|
Other
|
lineage4.9
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
ERR4821917
|
Sensitive
|
lineage1.1.3.2
|
gb
|
SRR7131229
|
Other
|
lineage4.1.2.1
|
None
|
SRR6045664
|
Other
|
lineage4.2.1
|
None
|
ERR10796626
|
Other
|
lineage4.1.2.1
|
None
|
ERR2513508
|
Sensitive
|
lineage3
|
gb
|
SRR7070461
|
Other
|
lineage3
|
None
|
ERR2600609
|
Other
|
lineage4.8
|
None
|
SRR7068873
|
Other
|
lineage4.8
|
None
|
SRR6046117
|
Other
|
lineage4.9
|
None
|
ERR10796571
|
Other
|
lineage4.9
|
None
|
ERR10796589
|
Other
|
lineage4.9
|
None
|
ERR3806588
|
Other
|
lineage6.1.3
|
None
|
SRR7070320
|
Other
|
lineage4.8
|
None
|
ERR2513681
|
Other
|
lineage1.1.2
|
None
|
ERR4815923
|
Sensitive
|
lineage4.8
|
None
|
SRR11349172
|
RR-TB
|
lineage4.3.2.1
|
None
|
ERR4814763
|
Other
|
lineage2.2.1
|
None
|
ERR11465776
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR18003038
|
Other
|
lineage2.2.1
|
None
|
SRR1173421
|
Other
|
lineage4.9
|
None
|
ERR867575
|
Other
|
lineage4.9
|
None
|
SRR7070469
|
Other
|
lineage4.3.1.1
|
None
|
ERR867555
|
Other
|
lineage3
|
None
|
SRR7070446
|
Other
|
lineage3
|
None
|
ERR4815709
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4818259
|
RR-TB
|
lineage4.1.1.1
|
None
|
ERR4818287
|
RR-TB
|
lineage4.5
|
gb
|
ERR4820959
|
Other
|
lineage4.1.2.1
|
None
|
SRR7069946
|
Other
|
lineage4.8
|
None
|
ERR4819002
|
HR-TB
|
lineage4.8
|
None
|
SRR18002963
|
Other
|
lineage2.2.1
|
None
|
ERR10796620
|
Other
|
lineage4.1.1.1
|
None
|
ERR067712
|
Sensitive
|
lineage4.9
|
None
|
ERR867574
|
Other
|
lineage4.9
|
None
|
SRR7131152
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6045603
|
Other
|
lineage4.1.1.3
|
None
|
ERR978761_ERR978762_ERR978760
|
RR-TB
|
lineage4.8
|
None
|
SRR19303796
|
Other
|
lineage4.3.3
|
None
|
ERR4596904
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR4818726
|
Other
|
lineage4.1.2.1
|
None
|
ERR978762
|
Other
|
lineage4.8
|
None
|
SRR18002976
|
Other
|
lineage2.2.1
|
None
|
ERR2027232
|
Other
|
lineage4.3.4.2
|
None
|
SRR11342691
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5818647
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR4817134
|
HR-TB
|
lineage2.2.1
|
None
|
SRR16627752
|
RR-TB
|
lineage4.4
|
None
|
SRR5007186
|
Sensitive
|
lineage4.6
|
None
|
SRR11342686
|
MDR-TB
|
lineage4.8
|
None
|
ERR4811708
|
HR-TB
|
lineage4
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
ERR4815034
|
Sensitive
|
lineage4.1.2.1
|
gb
|
ERR10796563
|
Other
|
lineage4.3.3
|
None
|
SRR7069314
|
Other
|
lineage3
|
None
|
SRR18003030
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR323044
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR7765062
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR4821286
|
Other
|
lineage4.8
|
None
|
SRR6046273
|
Other
|
lineage3.1.2
|
None
|
SRR18002930
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4596944
|
MDR-TB
|
lineage3.1.1
|
None
|
SRR6045952
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4821214
|
Other
|
lineage1.2.1.2.1
|
None
|
SRR11349147
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR1140716
|
Other
|
lineage3
|
None
|
SRR10315465
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR7645928
|
Other
|
lineage4.7
|
None
|
ERR4815910
|
Other
|
lineage4.1.2.1
|
None
|
ERR4816009
|
Other
|
lineage1.1.2
|
None
|
ERR4819699
|
HR-TB
|
lineage4.6.2.2
|
gb
|
ERR4820324
|
Other
|
lineage4
|
None
|
ERR4821409
|
Other
|
lineage4.8
|
None
|
ERR176580
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4821812
|
Sensitive
|
lineage4.8
|
gb
|
SRR18002874
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4821020
|
Sensitive
|
lineage4.1.1.3.1
|
None
|
SRR6397733
|
Other
|
lineage4.4.1.2
|
None
|
ERR4808964
|
RR-TB
|
lineage2.2.1
|
None
|
SRR5007161
|
RR-TB
|
lineage4.1.1.3.1;lineage4.9
|
None
|
SRR5007165
|
Other
|
lineage3
|
None
|
ERR4818556
|
Sensitive
|
lineage3
|
None
|
SRR10315464
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR10993951
|
RR-TB
|
La1.6
|
None
|
SRR1181403
|
Other
|
lineage4.9
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
SRR18003015
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2513382
|
RR-TB
|
lineage4.1.1.3
|
None
|
ERR4821176
|
Other
|
lineage2.2.1
|
None
|
ERR4819357
|
Sensitive
|
lineage4.9
|
None
|
SRR7069347
|
Other
|
lineage4.1.2.1
|
None
|
SRR1049673
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR9971041
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR10315558
|
Sensitive
|
lineage2.2.1
|
None
|
SRR11342684
|
HR-TB
|
lineage4.4.1.1
|
None
|
ERR4816610
|
Other
|
lineage4.3.3
|
None
|
ERR10219876
|
Other
|
lineage4.3.4.2
|
None
|
ERR4816833
|
Other
|
lineage4.1.1.3
|
None
|
ERR4818624
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR4818753
|
Sensitive
|
lineage3
|
gb
|
ERR2600562
|
MDR-TB
|
lineage2.2.1;lineage4.8
|
None
|
SRR1180440
|
Other
|
lineage4.9
|
None
|
ERR4809333
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR18003013
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
SRR6046815
|
Other
|
lineage3
|
None
|
SRR18003042
|
Other
|
lineage2.2.1
|
None
|
ERR867524
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR6045485
|
Other
|
lineage4.9
|
None
|
SRR7645977
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR6046440
|
Other
|
lineage3.1.2.2
|
None
|
ERR502481
|
RR-TB
|
lineage4.9
|
None
|
SRR14801325
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR4816476
|
Other
|
lineage3.1.2.1
|
None
|
ERR4816300
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4819830
|
Other
|
lineage2.2.1
|
None
|
SRR6045464
|
Other
|
lineage4.1.1.3
|
None
|
ERR4816243
|
Sensitive
|
lineage3
|
None
|
ERR4818489
|
Other
|
lineage1.1.3.1
|
None
|
SRR7131236
|
Other
|
lineage4.3.4.2
|
None
|
SRR1735596
|
RR-TB
|
lineage4.9
|
None
|
ERR4586795
|
Other
|
La1.8.1
|
None
|
ERR019855
|
Other
|
lineage3
|
None
|
SRR18002995
|
Other
|
lineage4.4.2
|
None
|
ERR3283033
|
Sensitive
|
lineage4.9
|
None
|
ERR4769554
|
RR-TB
|
lineage4.9
|
None
|
SRR11342669
|
Other
|
lineage4.8
|
None
|
ERR978756
|
Other
|
lineage4.8
|
None
|
SRR22175249
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6044817
|
Other
|
lineage3
|
None
|
ERR4814745
|
Other
|
lineage4.6.5
|
None
|
SRR7069800
|
Other
|
lineage3.1.2.1
|
None
|
SRR18002876
|
MDR-TB
|
lineage2.2.1;lineage2.2.2
|
None
|
ERR4819307
|
Other
|
lineage4.3.2
|
None
|
SRR3675552
|
Other
|
lineage4.9
|
None
|
ERR4817667
|
HR-TB
|
lineage4.8
|
None
|
SRR5007163
|
Other
|
lineage3;lineage4.9
|
None
|
SRR7069518
|
Other
|
lineage4.8
|
None
|
ERR7801176
|
RR-TB
|
lineage4.6.5
|
None
|
ERR10796634
|
Other
|
lineage4.7
|
None
|
SRR1173385
|
Sensitive
|
lineage4.9
|
None
|
SRR18909918
|
Other
|
lineage2.2.1.1
|
None
|
ERR4457829
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR11342687
|
RR-TB
|
lineage4.2.2.2
|
None
|
ERR4820266
|
Sensitive
|
lineage3
|
None
|
SAMEA3501015
|
Other
|
lineage4.8
|
None
|
ERR867526
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR867538
|
Other
|
lineage4.2.2.2
|
None
|
ERR4820817
|
Other
|
lineage4.1.2.1
|
None
|
ERR9117740
|
Other
|
lineage3.1.1
|
None
|
SRR7070369
|
Other
|
lineage1.2.2.2
|
None
|
SRR11349194
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2512986
|
Other
|
lineage3
|
None
|
ERR4820736
|
Sensitive
|
lineage4.1.2.1
|
gb
|
SRR7131028
|
Other
|
lineage4.8
|
None
|
ERR4828879
|
HR-TB
|
lineage3
|
None
|
SRR6045267
|
RR-TB
|
lineage4.8
|
None
|
SRR5007169
|
RR-TB
|
lineage4.8.2
|
None
|
ERR4821310
|
Other
|
lineage5
|
None
|
SRR5818460
|
Other
|
lineage4.9
|
None
|
SRR6045553
|
Other
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR7070535
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR7131121
|
Other
|
lineage4.3.3
|
None
|
SRR7131147
|
Other
|
lineage4.1.2.1
|
None
|
ERR2228838
|
Other
|
lineage4.8
|
None
|
SRR7755688
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR4769508
|
RR-TB
|
lineage4.9
|
None
|
SRR7645927
|
Other
|
lineage4.8
|
None
|
SRR10315579
|
Other
|
lineage2.2.1.1
|
None
|
ERR2514550
|
MDR-TB
|
lineage3
|
gb
|
SRR3675267
|
Other
|
La1.7;lineage4.9
|
None
|
SRR16156751
|
Other
|
lineage4.9
|
None
|
SRR16156775
|
Other
|
lineage4.9
|
None
|
ERR867567
|
RR-TB
|
lineage3
|
None
|
ERR4818000
|
Sensitive
|
lineage3.1.1
|
gb
|
SAMEA3501065
|
RR-TB
|
lineage4.8
|
None
|
SRR18002984
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR5818399
|
Sensitive
|
lineage4.9
|
None
|
ERR978750_ERR978752_ERR978751
|
RR-TB
|
lineage4.8
|
None
|
SRR18002937
|
Other
|
lineage2.2.1
|
None
|
ERR2513743
|
Other
|
lineage4.1.2
|
None
|
ERR4818561
|
Sensitive
|
lineage4.9
|
None
|
SRR10315696
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR978748
|
Other
|
lineage4.8
|
None
|
SRR6046521
|
Other
|
lineage4.4.1.1
|
None
|
ERR4831863
|
HR-TB
|
lineage2.2.1.1
|
None
|
ERR4814874
|
Sensitive
|
lineage1.1.2
|
None
|
ERR4818126
|
Other
|
lineage1.2.2
|
None
|
ERR4814356
|
Other
|
lineage3.1.2
|
None
|