Run ID: ERR4819456
Sample name:
Date: 01-04-2023 16:07:07
Number of reads: 382430
Percentage reads mapped: 29.22
Strain: lineage4.8
Drug-resistance: Other
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
lineage4.8 | Euro-American (mainly T) | T1;T2;T3;T5 | RD219 | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|---|---|---|---|---|
rrs | 1472644 | n.799C>T | non_coding_transcript_exon_variant | 0.25 | streptomycin |
rrs | 1472733 | n.888G>A | non_coding_transcript_exon_variant | 0.77 | streptomycin |
rrs | 1473247 | n.1402C>A | non_coding_transcript_exon_variant | 0.39 | kanamycin, capreomycin, aminoglycosides, amikacin |
rrs | 1473329 | n.1484G>T | non_coding_transcript_exon_variant | 0.38 | kanamycin, capreomycin, aminoglycosides, amikacin |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 |
rpoB | 761084 | c.1278C>A | synonymous_variant | 0.29 |
rpoB | 761088 | c.1282_1283delAGinsTC | synonymous_variant | 0.29 |
rpoB | 761097 | c.1291_1293delAGCinsTCG | synonymous_variant | 0.29 |
rpoB | 761102 | c.1296A>G | synonymous_variant | 0.33 |
rpoB | 762011 | c.2205G>C | synonymous_variant | 0.15 |
rpoB | 762024 | p.Val740Ile | missense_variant | 0.13 |
rpoB | 762029 | c.2223C>G | synonymous_variant | 0.12 |
rpoB | 762051 | p.His749Tyr | missense_variant | 0.12 |
rpoB | 762057 | p.Ile751Val | missense_variant | 0.12 |
rpoB | 762062 | c.2256T>C | synonymous_variant | 0.12 |
rpoB | 762065 | c.2259T>C | synonymous_variant | 0.12 |
rpoB | 762071 | p.Asp755Glu | missense_variant | 0.12 |
rpoB | 762080 | c.2274G>C | synonymous_variant | 0.2 |
rpoB | 762085 | p.Ala760Glu | missense_variant | 0.21 |
rpoB | 762089 | c.2283G>A | synonymous_variant | 0.21 |
rpoB | 762110 | c.2304G>C | synonymous_variant | 0.17 |
rpoB | 762134 | c.2328C>A | synonymous_variant | 0.18 |
rpoB | 762143 | c.2337T>C | synonymous_variant | 0.18 |
rpoB | 762149 | c.2343G>C | synonymous_variant | 0.17 |
rpoB | 762156 | p.Val784Ile | missense_variant | 0.18 |
rpoB | 762167 | c.2361T>C | synonymous_variant | 0.18 |
rpoB | 762194 | c.2388G>C | synonymous_variant | 0.12 |
rpoB | 762200 | c.2394C>T | synonymous_variant | 0.18 |
rpoB | 762212 | c.2406G>C | synonymous_variant | 0.21 |
rpoB | 762218 | c.2412T>C | synonymous_variant | 0.27 |
rpoB | 762233 | c.2427G>C | synonymous_variant | 0.19 |
rpoB | 762234 | p.Pro810Ser | missense_variant | 0.19 |
rpoB | 762239 | c.2433G>A | synonymous_variant | 0.2 |
rpoB | 762245 | c.2439G>C | synonymous_variant | 0.19 |
rpoB | 762254 | c.2448T>C | synonymous_variant | 0.2 |
rpoB | 762293 | c.2487T>C | synonymous_variant | 0.29 |
rpoB | 762879 | p.Met1025Leu | missense_variant | 0.29 |
rpoC | 762902 | c.-468C>T | upstream_gene_variant | 0.36 |
rpoC | 762911 | c.-459C>T | upstream_gene_variant | 0.46 |
rpoC | 762917 | c.-453C>T | upstream_gene_variant | 0.4 |
rpoC | 762920 | c.-450C>T | upstream_gene_variant | 0.4 |
rpoC | 762929 | c.-441G>T | upstream_gene_variant | 0.38 |
rpoC | 762944 | c.-426C>T | upstream_gene_variant | 0.31 |
rpoC | 762956 | c.-414G>T | upstream_gene_variant | 0.36 |
rpoC | 762962 | c.-408C>T | upstream_gene_variant | 0.33 |
rpoC | 762983 | c.-387C>T | upstream_gene_variant | 0.31 |
rpoC | 762989 | c.-381G>C | upstream_gene_variant | 0.25 |
rpoB | 763038 | p.Thr1078Ala | missense_variant | 0.29 |
rpoC | 763043 | c.-327G>C | upstream_gene_variant | 0.33 |
rpoC | 763053 | c.-317T>C | upstream_gene_variant | 0.36 |
rpoC | 763070 | c.-300T>C | upstream_gene_variant | 0.36 |
rpoB | 763077 | p.Val1091Ser | missense_variant | 0.4 |
rpoC | 763103 | c.-267G>C | upstream_gene_variant | 0.36 |
rpoC | 763115 | c.-255T>C | upstream_gene_variant | 0.33 |
rpoB | 763119 | p.Asn1105Asp | missense_variant | 0.31 |
rpoC | 763127 | c.-243G>C | upstream_gene_variant | 0.33 |
rpoC | 763133 | c.-237G>C | upstream_gene_variant | 0.2 |
rpoC | 763699 | c.330G>T | synonymous_variant | 0.33 |
rpoC | 763708 | c.339G>C | synonymous_variant | 0.33 |
rpoC | 763714 | c.345G>C | synonymous_variant | 0.4 |
rpoC | 763717 | c.348T>C | synonymous_variant | 0.4 |
rpoC | 763718 | p.Leu117Val | missense_variant | 0.33 |
rpoC | 763723 | c.354G>C | synonymous_variant | 0.33 |
rpoC | 763724 | p.Asp119Asn | missense_variant | 0.33 |
rpoC | 763729 | c.360G>C | synonymous_variant | 0.33 |
rpoC | 763732 | c.363C>G | synonymous_variant | 0.33 |
rpoC | 763735 | c.366G>C | synonymous_variant | 0.33 |
rpoC | 763744 | c.375G>C | synonymous_variant | 0.33 |
rpoC | 763751 | p.Ile128Val | missense_variant | 0.33 |
rpoC | 764512 | c.1143G>C | synonymous_variant | 0.22 |
rpoC | 764521 | c.1152T>C | synonymous_variant | 0.27 |
rpoC | 764530 | c.1161C>T | synonymous_variant | 0.36 |
rpoC | 764536 | c.1167G>C | synonymous_variant | 0.36 |
rpoC | 764543 | p.Thr392Ala | missense_variant | 0.33 |
rpoC | 764548 | c.1179G>C | synonymous_variant | 0.33 |
rpoC | 764573 | p.Leu402Ile | missense_variant | 0.23 |
rpoC | 764578 | c.1209C>G | synonymous_variant | 0.23 |
rpoC | 764581 | c.1212T>C | synonymous_variant | 0.21 |
rpoC | 764582 | p.Leu405Met | missense_variant | 0.23 |
rpoC | 764602 | c.1233C>T | synonymous_variant | 0.19 |
rpoC | 764605 | c.1236G>T | synonymous_variant | 0.19 |
rpoC | 764611 | c.1242G>T | synonymous_variant | 0.2 |
rpoC | 764692 | c.1323C>T | synonymous_variant | 0.2 |
rpoC | 764706 | p.Leu446Gln | missense_variant | 0.33 |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 |
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 |
rpsL | 781796 | p.Met79Ile | missense_variant | 0.17 |
rpsL | 781802 | c.243G>C | synonymous_variant | 0.17 |
rpsL | 781805 | c.246G>T | synonymous_variant | 0.15 |
rpsL | 781811 | c.252C>T | synonymous_variant | 0.15 |
rpsL | 781814 | c.255C>T | synonymous_variant | 0.17 |
rpsL | 781817 | c.258G>T | synonymous_variant | 0.17 |
rpsL | 781832 | c.273T>C | synonymous_variant | 0.17 |
rpsL | 781835 | c.276T>C | synonymous_variant | 0.17 |
rpsL | 781841 | c.282C>T | synonymous_variant | 0.17 |
rpsL | 781845 | p.Lys96Arg | missense_variant | 0.17 |
rpsL | 781851 | p.Ile98Val | missense_variant | 0.18 |
rpsL | 781868 | c.309T>C | synonymous_variant | 0.18 |
fbiC | 1303522 | c.594delG | frameshift_variant | 0.4 |
fbiC | 1303747 | p.Thr273Ala | missense_variant | 1.0 |
Rv1258c | 1406839 | p.Val168Ile | missense_variant | 0.17 |
embR | 1416314 | p.Arg345Gln | missense_variant | 0.29 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
rrs | 1472102 | n.257G>A | non_coding_transcript_exon_variant | 0.2 |
rrs | 1472106 | n.261G>A | non_coding_transcript_exon_variant | 0.31 |
rrs | 1472108 | n.263C>T | non_coding_transcript_exon_variant | 0.57 |
rrs | 1472112 | n.267C>T | non_coding_transcript_exon_variant | 0.36 |
rrs | 1472113 | n.268T>C | non_coding_transcript_exon_variant | 0.36 |
rrs | 1472122 | n.277G>T | non_coding_transcript_exon_variant | 0.36 |
rrs | 1472123 | n.278A>T | non_coding_transcript_exon_variant | 0.36 |
rrs | 1472124 | n.279C>T | non_coding_transcript_exon_variant | 0.36 |
rrs | 1472150 | n.305T>A | non_coding_transcript_exon_variant | 0.97 |
rrs | 1472155 | n.310C>T | non_coding_transcript_exon_variant | 0.36 |
rrs | 1472160 | n.315C>T | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472172 | n.327T>C | non_coding_transcript_exon_variant | 0.65 |
rrs | 1472225 | n.380C>A | non_coding_transcript_exon_variant | 0.36 |
rrs | 1472251 | n.406G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472258 | n.413A>G | non_coding_transcript_exon_variant | 0.31 |
rrs | 1472259 | n.414C>A | non_coding_transcript_exon_variant | 0.35 |
rrs | 1472338 | n.493A>G | non_coding_transcript_exon_variant | 0.75 |
rrs | 1472344 | n.499C>T | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472379 | n.534T>C | non_coding_transcript_exon_variant | 0.75 |
rrs | 1472400 | n.555C>T | non_coding_transcript_exon_variant | 0.75 |
rrs | 1472412 | n.567A>G | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472416 | n.571C>T | non_coding_transcript_exon_variant | 0.75 |
rrs | 1472422 | n.577T>C | non_coding_transcript_exon_variant | 0.75 |
rrs | 1472462 | n.617T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472464 | n.619A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472473 | n.628G>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472474 | n.629C>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472476 | n.631A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472484 | n.639A>T | non_coding_transcript_exon_variant | 0.43 |
rrs | 1472489 | n.644A>T | non_coding_transcript_exon_variant | 0.3 |
rrs | 1472494 | n.649A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472496 | n.651T>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472496 | n.651T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472498 | n.653C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472507 | n.662C>G | non_coding_transcript_exon_variant | 0.47 |
rrs | 1472513 | n.668T>C | non_coding_transcript_exon_variant | 0.26 |
rrs | 1472517 | n.672T>A | non_coding_transcript_exon_variant | 0.46 |
rrs | 1472518 | n.673G>T | non_coding_transcript_exon_variant | 0.46 |
rrs | 1472530 | n.685G>A | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472537 | n.692C>T | non_coding_transcript_exon_variant | 0.65 |
rrs | 1472544 | n.699C>A | non_coding_transcript_exon_variant | 0.69 |
rrs | 1472545 | n.700A>T | non_coding_transcript_exon_variant | 0.69 |
rrs | 1472549 | n.704G>A | non_coding_transcript_exon_variant | 0.15 |
rrs | 1472558 | n.713G>A | non_coding_transcript_exon_variant | 0.12 |
rrs | 1472566 | n.721G>A | non_coding_transcript_exon_variant | 0.65 |
rrs | 1472569 | n.724G>A | non_coding_transcript_exon_variant | 0.11 |
rrs | 1472571 | n.726G>C | non_coding_transcript_exon_variant | 0.75 |
rrs | 1472579 | n.734G>T | non_coding_transcript_exon_variant | 0.62 |
rrs | 1472580 | n.735C>T | non_coding_transcript_exon_variant | 0.22 |
rrs | 1472581 | n.736A>T | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472584 | n.739A>T | non_coding_transcript_exon_variant | 0.14 |
rrs | 1472597 | n.752G>A | non_coding_transcript_exon_variant | 0.13 |
rrs | 1472598 | n.753A>C | non_coding_transcript_exon_variant | 0.72 |
rrs | 1472599 | n.754G>T | non_coding_transcript_exon_variant | 0.72 |
rrs | 1472607 | n.762G>A | non_coding_transcript_exon_variant | 0.13 |
rrs | 1472612 | n.767G>T | non_coding_transcript_exon_variant | 0.13 |
rrs | 1472616 | n.771G>A | non_coding_transcript_exon_variant | 0.73 |
rrs | 1472655 | n.810G>A | non_coding_transcript_exon_variant | 0.83 |
rrs | 1472655 | n.810G>T | non_coding_transcript_exon_variant | 0.86 |
rrs | 1472658 | n.813G>A | non_coding_transcript_exon_variant | 0.38 |
rrs | 1472660 | n.815T>C | non_coding_transcript_exon_variant | 0.52 |
rrs | 1472661 | n.816A>G | non_coding_transcript_exon_variant | 0.35 |
rrs | 1472670 | n.825G>T | non_coding_transcript_exon_variant | 0.39 |
rrs | 1472673 | n.828T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472675 | n.830T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472677 | n.832C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472681 | n.837_838delTT | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472687 | n.842_843insC | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472690 | n.845C>A | non_coding_transcript_exon_variant | 0.89 |
rrs | 1472697 | n.852T>C | non_coding_transcript_exon_variant | 0.65 |
rrs | 1472713 | n.868T>C | non_coding_transcript_exon_variant | 0.77 |
rrs | 1472714 | n.869A>G | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472716 | n.871C>T | non_coding_transcript_exon_variant | 0.75 |
rrs | 1472742 | n.897C>T | non_coding_transcript_exon_variant | 0.76 |
rrs | 1472744 | n.899A>G | non_coding_transcript_exon_variant | 0.76 |
rrs | 1472755 | n.910G>A | non_coding_transcript_exon_variant | 0.16 |
rrs | 1472767 | n.922G>A | non_coding_transcript_exon_variant | 0.12 |
rrs | 1472781 | n.936C>T | non_coding_transcript_exon_variant | 0.75 |
rrs | 1472790 | n.945T>C | non_coding_transcript_exon_variant | 0.26 |
rrs | 1472793 | n.948A>T | non_coding_transcript_exon_variant | 0.74 |
rrs | 1472803 | n.958T>A | non_coding_transcript_exon_variant | 0.74 |
rrs | 1472824 | n.979T>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472825 | n.980G>A | non_coding_transcript_exon_variant | 0.24 |
rrs | 1472827 | n.982G>T | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472828 | n.983T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472895 | n.1050C>T | non_coding_transcript_exon_variant | 0.95 |
rrs | 1472952 | n.1107T>C | non_coding_transcript_exon_variant | 0.65 |
rrs | 1472954 | n.1109T>C | non_coding_transcript_exon_variant | 0.32 |
rrs | 1472955 | n.1110C>T | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472956 | n.1111T>C | non_coding_transcript_exon_variant | 0.98 |
rrs | 1472957 | n.1112C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472973 | n.1128A>G | non_coding_transcript_exon_variant | 0.95 |
rrs | 1472973 | n.1128A>T | non_coding_transcript_exon_variant | 0.98 |
rrs | 1472987 | n.1142G>A | non_coding_transcript_exon_variant | 0.66 |
rrs | 1472989 | n.1144G>A | non_coding_transcript_exon_variant | 0.63 |
rrs | 1472990 | n.1145A>G | non_coding_transcript_exon_variant | 0.96 |
rrs | 1472992 | n.1147A>G | non_coding_transcript_exon_variant | 0.3 |
rrs | 1473005 | n.1160C>T | non_coding_transcript_exon_variant | 0.27 |
rrs | 1473035 | n.1190G>A | non_coding_transcript_exon_variant | 0.98 |
rrs | 1473055 | n.1210C>T | non_coding_transcript_exon_variant | 0.96 |
rrs | 1473056 | n.1211A>T | non_coding_transcript_exon_variant | 0.98 |
rrs | 1473066 | n.1221A>G | non_coding_transcript_exon_variant | 0.98 |
rrs | 1473080 | n.1235C>T | non_coding_transcript_exon_variant | 0.23 |
rrs | 1473081 | n.1236C>T | non_coding_transcript_exon_variant | 0.24 |
rrs | 1473088 | n.1243A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473093 | n.1248C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473100 | n.1255G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473102 | n.1257C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473110 | n.1265T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473115 | n.1270G>T | non_coding_transcript_exon_variant | 0.64 |
rrs | 1473121 | n.1276T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473123 | n.1278A>T | non_coding_transcript_exon_variant | 0.35 |
rrs | 1473130 | n.1285G>A | non_coding_transcript_exon_variant | 0.39 |
rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 0.98 |
rrs | 1473161 | n.1316A>C | non_coding_transcript_exon_variant | 0.1 |
rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 0.97 |
rrs | 1473172 | n.1327T>G | non_coding_transcript_exon_variant | 0.41 |
rrs | 1473173 | n.1328C>T | non_coding_transcript_exon_variant | 0.41 |
rrs | 1473177 | n.1332G>A | non_coding_transcript_exon_variant | 0.15 |
rrs | 1473192 | n.1347A>G | non_coding_transcript_exon_variant | 0.21 |
rrs | 1473199 | n.1356delA | non_coding_transcript_exon_variant | 0.2 |
rrs | 1473205 | n.1360T>C | non_coding_transcript_exon_variant | 0.21 |
rrs | 1473221 | n.1376C>T | non_coding_transcript_exon_variant | 0.37 |
rrs | 1473252 | n.1407T>C | non_coding_transcript_exon_variant | 0.97 |
rrs | 1473259 | n.1414C>T | non_coding_transcript_exon_variant | 0.97 |
rrs | 1473270 | n.1425G>A | non_coding_transcript_exon_variant | 0.38 |
rrs | 1473276 | n.1431A>C | non_coding_transcript_exon_variant | 0.94 |
rrs | 1473276 | n.1431A>G | non_coding_transcript_exon_variant | 0.93 |
rrs | 1473277 | n.1432G>A | non_coding_transcript_exon_variant | 0.52 |
rrs | 1473291 | n.1446G>C | non_coding_transcript_exon_variant | 0.45 |
rrs | 1473294 | n.1449A>G | non_coding_transcript_exon_variant | 0.5 |
rrs | 1473300 | n.1455C>T | non_coding_transcript_exon_variant | 0.48 |
rrs | 1473301 | n.1456T>C | non_coding_transcript_exon_variant | 0.91 |
rrs | 1473301 | n.1456T>G | non_coding_transcript_exon_variant | 0.91 |
rrs | 1473305 | n.1460G>T | non_coding_transcript_exon_variant | 0.48 |
rrs | 1473316 | n.1471C>T | non_coding_transcript_exon_variant | 0.95 |
rrl | 1474164 | n.507C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474171 | n.514C>T | non_coding_transcript_exon_variant | 0.25 |
rrl | 1474181 | n.524C>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474184 | n.527C>T | non_coding_transcript_exon_variant | 0.86 |
rrl | 1474185 | n.528G>A | non_coding_transcript_exon_variant | 0.56 |
rrl | 1474186 | n.529A>G | non_coding_transcript_exon_variant | 0.33 |
rrl | 1474197 | n.540C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474199 | n.542G>C | non_coding_transcript_exon_variant | 0.86 |
rrl | 1474200 | n.545delT | non_coding_transcript_exon_variant | 0.86 |
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.88 |
rrl | 1474252 | n.595T>A | non_coding_transcript_exon_variant | 0.29 |
rrl | 1474269 | n.612C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1475883 | n.2226A>C | non_coding_transcript_exon_variant | 0.75 |
rrl | 1475884 | n.2227A>G | non_coding_transcript_exon_variant | 0.6 |
rrl | 1476130 | n.2473G>A | non_coding_transcript_exon_variant | 0.43 |
rrl | 1476131 | n.2474C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476164 | n.2507A>G | non_coding_transcript_exon_variant | 0.45 |
rrl | 1476179 | n.2522C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476194 | n.2537A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476200 | n.2543A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476201 | n.2544C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476204 | n.2547C>T | non_coding_transcript_exon_variant | 0.46 |
rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 0.6 |
rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 0.6 |
rrl | 1476221 | n.2564T>C | non_coding_transcript_exon_variant | 0.22 |
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.88 |
rrl | 1476227 | n.2570C>T | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476245 | n.2588C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476250 | n.2593C>G | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476251 | n.2594T>C | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476252 | n.2595T>G | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476253 | n.2596A>G | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476256 | n.2599A>G | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476257 | n.2600G>C | non_coding_transcript_exon_variant | 0.43 |
rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 0.71 |
rrl | 1476337 | n.2680C>T | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476359 | n.2702C>G | non_coding_transcript_exon_variant | 0.88 |
rrl | 1476381 | n.2724G>C | non_coding_transcript_exon_variant | 0.91 |
rrl | 1476428 | n.2771C>T | non_coding_transcript_exon_variant | 0.97 |
rrl | 1476429 | n.2772A>C | non_coding_transcript_exon_variant | 0.96 |
rrl | 1476429 | n.2772A>T | non_coding_transcript_exon_variant | 0.92 |
rrl | 1476466 | n.2809C>T | non_coding_transcript_exon_variant | 0.68 |
rrl | 1476481 | n.2824T>C | non_coding_transcript_exon_variant | 0.82 |
rrl | 1476506 | n.2849T>C | non_coding_transcript_exon_variant | 0.58 |
rrl | 1476524 | n.2867C>T | non_coding_transcript_exon_variant | 0.25 |
rrl | 1476525 | n.2868A>G | non_coding_transcript_exon_variant | 0.25 |
rrl | 1476530 | n.2873C>T | non_coding_transcript_exon_variant | 0.22 |
rrl | 1476567 | n.2910C>T | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476584 | n.2927C>T | non_coding_transcript_exon_variant | 0.4 |
rrl | 1476585 | n.2928A>G | non_coding_transcript_exon_variant | 0.4 |
rrl | 1476594 | n.2937C>A | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476603 | n.2946G>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476607 | n.2950C>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476608 | n.2951C>G | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476614 | n.2957A>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476619 | n.2962C>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476628 | n.2971T>A | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476629 | n.2972C>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476630 | n.2973A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476661 | n.3004A>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476665 | n.3008T>G | non_coding_transcript_exon_variant | 0.33 |
rrl | 1476668 | n.3011C>T | non_coding_transcript_exon_variant | 0.33 |
rpsA | 1834216 | c.675C>T | synonymous_variant | 0.4 |
rpsA | 1834234 | c.693G>C | synonymous_variant | 0.29 |
rpsA | 1834240 | c.699T>C | synonymous_variant | 0.2 |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.22 |
rpsA | 1834261 | c.720A>G | synonymous_variant | 0.2 |
rpsA | 1834264 | c.723G>C | synonymous_variant | 0.2 |
rpsA | 1834294 | c.753G>C | synonymous_variant | 0.23 |
rpsA | 1834298 | p.Gln253Glu | missense_variant | 0.23 |
rpsA | 1834306 | c.765T>C | synonymous_variant | 0.18 |
rpsA | 1834307 | p.Asp256Gln | missense_variant | 0.18 |
rpsA | 1834312 | c.771G>A | synonymous_variant | 0.18 |
rpsA | 1834327 | c.786G>T | synonymous_variant | 0.2 |
rpsA | 1834345 | c.804C>T | synonymous_variant | 0.25 |
rpsA | 1834348 | c.807T>C | synonymous_variant | 0.29 |
rpsA | 1834354 | c.813G>C | synonymous_variant | 0.29 |
rpsA | 1834405 | c.864C>T | synonymous_variant | 0.33 |
rpsA | 1834411 | c.870T>C | synonymous_variant | 0.22 |
rpsA | 1834417 | c.876G>C | synonymous_variant | 0.22 |
rpsA | 1834423 | c.882G>C | synonymous_variant | 0.2 |
rpsA | 1834427 | p.Ile296Val | missense_variant | 0.2 |
tlyA | 1917972 | c.33A>G | synonymous_variant | 1.0 |
PPE35 | 2169460 | p.Gly385Ser | missense_variant | 0.25 |
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 |
kasA | 2518842 | p.Gly243Val | missense_variant | 0.11 |
clpC1 | 4038761 | c.1944C>A | synonymous_variant | 0.18 |
embA | 4242643 | c.-590C>T | upstream_gene_variant | 1.0 |
embA | 4243741 | c.510_511delTG | frameshift_variant | 0.14 |
embB | 4246151 | c.-363A>G | upstream_gene_variant | 1.0 |
ethA | 4326863 | p.Met204Thr | missense_variant | 0.15 |
whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 1.0 |
Rv3083 | 3448507 | c.5_*1408del | frameshift_variant&stop_lost&splice_region_variant | 1.0 |