EBG00000313325 - n.1455C>T
Drug resistance types
34 Sensitive
25 RR-TB
30 HR-TB
12 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
183 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.1.1 | 1 |
| lineage4.1.2.1 | 33 |
| lineage3 | 46 |
| lineage4.1 | 2 |
| lineage4.4.1.1 | 12 |
| lineage4.1.3 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.6.2.2 | 11 |
| lineage1.1.2 | 12 |
| lineage4.6.5 | 2 |
| lineage5 | 1 |
| lineage3.1.1 | 6 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1.2 | 3 |
| lineage4.4.2 | 2 |
| lineage2.2.2 | 2 |
| lineage4.1.1 | 2 |
| lineage4.3.3 | 7 |
| lineage4.8 | 24 |
| lineage1.1.1.1 | 1 |
| lineage4.1.1.3 | 5 |
| lineage4;lineage3.1.2.1 | 1 |
| lineage4.2.1 | 5 |
| lineage2.2.1 | 19 |
| 11 | |
| lineage4.2.2.2 | 3 |
| lineage4.9 | 7 |
| lineage4.3.4.1 | 2 |
| lineage4;lineage2 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.1.1.2 | 1 |
| La1.6 | 2 |
| lineage4.8.2 | 1 |
| lineage4 | 2 |
| lineage4.1.1.3.1 | 2 |
| lineage4.4.1.2 | 2 |
| lineage3.1.2 | 4 |
| lineage3.1.2.1 | 7 |
| lineage1.1.3.2 | 2 |
| lineage4.3.2 | 3 |
| lineage6 | 2 |
| lineage4.2.2 | 1 |
| lineage4;lineage3 | 1 |
| lineage4.1.2 | 5 |
| lineage1.2.1.2.1 | 3 |
| lineage3.1.3 | 1 |
| lineage4.5 | 2 |
| lineage4.5;lineage2.2.1 | 1 |
| La1.3 | 1 |
| lineage4.3.4.2 | 1 |
| lineage1 | 2 |
| lineage1.1.3.1 | 3 |
| lineage2.2.1;lineage1.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage1.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage3.1.2.2 | 2 |
| lineage4.6 | 1 |
| La1.8.2 | 1 |
| lineage4.8.1 | 1 |
| M.orygis | 1 |
| lineage4.3.3;lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 289 |
Geographic prevalence
Country level data for this variant is available for 118 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4821879 | Other | lineage4.6.1.1 | None | ERR4821245 | Other | lineage4.1.2.1 | None | SRR6046679 | Other | lineage3 | gb | SRR6046020 | Other | lineage3 | None | SRR3675288 | Other | lineage3 | None | ERR4817426 | Other | lineage4.1 | gb | SRR6397642 | Other | lineage4.4.1.1 | None | ERR4820184 | MDR-TB | lineage3 | gb | ERR2515055 | Other | lineage3 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4815811 | Other | lineage4.2.1.1 | None | ERR4821127 | HR-TB | lineage4.6.2.2 | gb | ERR4815171 | HR-TB | lineage1.1.2 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR4819348 | Sensitive | lineage4.1.2.1 | gb | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816009 | Other | lineage1.1.2 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | ERR4815334 | Other | lineage3.1.1 | None | ERR4816691 | Other | lineage4.1.2.1 | gb | SRR5818672 | Other | lineage1.2.2.2 | None | ERR2515062 | Other | lineage2.2.1.2 | gb | ERR4821924 | HR-TB | lineage4.6.2.2 | gb | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | ERR4816627 | Other | lineage2.2.2 | None | ERR4819532 | HR-TB | lineage4.6.2.2 | gb | SRR5007161 | RR-TB | lineage4.1.1 | None | ERR4818952 | Other | lineage3 | None | ERR4821958 | Other | lineage4.3.3 | gb | ERR4820047 | HR-TB | lineage4.8 | gb | ERR2514279 | Other | lineage3 | gb | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4815898 | Other | lineage3 | None | ERR4814714 | Other | lineage3 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR4817475 | Other | lineage4.1.1.3 | gb | ERR4815301 | Other | lineage4.4.2 | None | ERR4819377 | Other | lineage4;lineage3.1.2.1 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4819515 | HR-TB | lineage4.2.1 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR5818408 | Other | None | ERR4815738 | Other | lineage3 | None | ERR4816968 | Other | lineage4.2.1 | gb | ERR4817805 | Sensitive | lineage2.2.1 | gb | ERR4817828 | Other | lineage4.2.2.2 | gb | ERR2513398 | Other | lineage4.2.1 | gb | ERR4820256 | Other | lineage2.2.1 | None | ERR2514533 | Other | lineage4.9 | None | ERR4820909 | HR-TB | lineage4.3.4.1 | gb | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR1035138 | MDR-TB | None | ERR4814681 | Other | lineage2.2.1 | None | ERR2510790 | Other | lineage4.6.2.2 | None | ERR2512443 | Sensitive | lineage4.8 | gb | SRR6046442 | Other | lineage3 | None | ERR4815956 | Other | lineage1.1.2 | None | ERR1023502 | MDR-TB | lineage4;lineage2 | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR2513903 | Other | lineage4.4.1.1 | gb | ERR4816510 | Other | lineage4.1.2.1 | None | SRR6046463 | Other | lineage4.4.1.1 | None | ERR4814789 | Other | lineage3 | gb | ERR2509886 | RR-TB | lineage3 | None | ERR4822176 | Other | lineage4.1.1.2 | None | ERR4814355 | Other | La1.6 | gb | SRR6046159 | Other | lineage4.8.2 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | ERR4819699 | HR-TB | lineage4.6.2.2 | gb | ERR4815197 | Other | lineage4 | None | ERR2514838 | Other | lineage4.8 | gb | ERR4818986 | Sensitive | lineage4.3.2.1 | gb | ERR4815814 | Other | lineage3 | gb | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4820690 | Other | lineage4.1.1 | gb | SRR6046864 | Other | lineage3 | gb | ERR4820275 | HR-TB | lineage4.4.1.2 | gb | ERR4819491 | Other | lineage4.1.2.1 | None | ERR2510781 | Sensitive | lineage4.8 | it | ERR4818763 | Other | lineage3 | gb | ERR4821105 | Other | lineage3.1.2 | gb | ERR181744 | HR-TB | None | ERR212123 | Other | None | ERR2514565 | Other | lineage3.1.2.1 | gb | ERR4815285 | HR-TB | lineage2.2.1 | None | ERR4816726 | Sensitive | lineage1.1.2 | gb | ERR4817823 | Sensitive | lineage1.1.3.2 | gb | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4819766 | Other | lineage4.4.1.1 | None | ERR4820404 | Other | lineage4.3.2 | None | ERR3806588 | Other | lineage6 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | ERR4829835 | HR-TB | lineage4.8 | it | DRR188816 | Sensitive | lineage4.2.2 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR20969980 | HR-TB | lineage2.2.1 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR2513450 | Other | lineage1.2.1.2.1 | gb | ERR2513462 | Sensitive | lineage3.1.3 | gb | SRR6045125 | Other | lineage1.1.2 | None | ERR4818918 | Other | lineage1.1.2 | gb | ERR4819636 | Other | lineage3.1.2 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4821167 | Other | lineage4.8 | gb | ERR4815425 | Other | lineage4.5 | gb | ERR4817382 | Other | lineage4.9 | gb | ERR4817464 | Other | lineage3.1.1 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4820026 | Other | lineage3 | None | ERR4821488 | Sensitive | lineage4.1.3 | None | ERR4821791 | HR-TB | lineage4.1.2.1 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR20969695 | HR-TB | lineage4.5;lineage2.2.1 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR4815472 | Other | lineage4.9 | gb | ERR10796576 | RR-TB | lineage4.9 | None | ERR212034 | HR-TB | None | ERR2513056 | HR-TB | lineage4.1.2.1 | gb | ERR2514609 | HR-TB | lineage3 | gb | ERR4769453 | Other | La1.3 | None | ERR4814986 | Other | lineage4.3.4.2 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | ERR2513149 | Other | lineage2.2.1.2 | gb | ERR2514630 | Other | lineage3.1.2.1 | gb | ERR4816650 | Sensitive | lineage4.1.2.1 | None | ERR4817881 | Sensitive | lineage4.1.2.1 | None | ERR4816690 | Other | None | ERR4817039 | Other | lineage4.1.2.1 | gb | ERR4818126 | RR-TB | lineage1 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4818825 | HR-TB | lineage4.1.2.1 | None | ERR4819555 | Other | lineage4.8 | None | ERR4821341 | Other | lineage4.3.4.1 | None | ERR4821417 | Other | lineage1.1.3.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR4815478 | RR-TB | lineage2.2.1;lineage1.1.1 | gb | SRR5818435 | Sensitive | lineage4.9 | None | ERR2513699 | Other | lineage4.1.2 | gb | SRR6045159 | Other | lineage3.1.1 | None | SRR6367397 | Other | lineage4.1.2.1 | None | ERR2512884 | Other | lineage4.6.2.2 | gb | ERR2512991 | Other | lineage1.2.1.2.1 | gb | ERR4815314 | Other | lineage2.2.1.2 | gb | ERR4817488 | Other | lineage4.3.4.2.1 | None | ERR4815919 | Other | lineage4.8 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4817392 | Other | lineage4.1.2.1 | gb | ERR4819324 | Other | lineage4.8 | gb | ERR4818214 | Sensitive | lineage4.1.2.1 | gb | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818691 | Other | lineage4.8 | None | ERR4818102 | HR-TB | lineage4.8 | gb | ERR4818663 | Other | lineage3 | None | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4819655 | Other | lineage4.8 | None | ERR4819630 | Other | lineage4.8 | gb | ERR4819414 | Other | lineage1.1.3.1 | gb | SRR11349172 | RR-TB | lineage4.3.2.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR4821011 | Other | lineage6 | None | ERR4821773 | Other | La1.6 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR4814699 | HR-TB | lineage4.1.2.1 | gb | ERR4821736 | HR-TB | lineage2.2.1 | gb | ERR4814399 | Other | lineage4.6.2.2 | gb | ERR2514215 | Other | lineage2.2.1 | gb | ERR2514926 | Other | lineage4.6.2.2 | gb | SRR6046766 | Other | lineage3.1.1 | None | ERR2512775 | Sensitive | lineage4.2.1 | gb | ERR2514173 | Other | lineage4.5 | gb | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4820926 | Other | lineage4.8 | gb | SRR6046246 | Other | lineage3 | None | ERR4820846 | RR-TB | lineage4.6.2.2 | gb | ERR4820968 | Other | lineage4.1.2.1 | gb | ERR2512606 | MDR-TB | lineage3 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR2512704 | Other | lineage4.3.2 | gb | SRR5818388 | Other | None | ERR4809049 | Sensitive | lineage4.1.2 | za | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR2513401 | HR-TB | lineage3 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR4818274 | Other | lineage4 | None | ERR4820684 | Other | lineage3 | gb | ERR4818556 | Other | lineage3 | None | ERR4822044 | Other | lineage3 | gb | ERR4820001 | Sensitive | lineage4.8 | gb | ERR4819181 | Other | lineage3 | gb | ERR2512986 | Other | lineage3 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4821477 | Other | lineage4.8 | None | ERR4822222 | Other | lineage3.1.2.2 | None | SRR6046291 | Other | lineage3 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR4819525 | Other | lineage3 | None | ERR4820907 | Other | lineage4.1.2.1 | gb | ERR2514854 | Other | lineage4.3.3 | None | ERR4818498 | Other | lineage3.1.2.1 | gb | SRR5818429 | Sensitive | None | ERR4819030 | Other | lineage4.6.2.2 | gb | ERR2513830 | RR-TB | lineage4.8 | None | ERR4820787 | Other | lineage3.1.1 | gb | ERR4816184 | Other | lineage4.1.2.1 | None | SRR6045849 | Other | lineage4.4.1.1 | None | ERR4821917 | Sensitive | lineage1.1.3.2 | gb | ERR4815053 | Other | lineage4.1.2.1 | gb | SRR3675291 | Sensitive | lineage4.6 | gb | ERR4819765 | Other | lineage4.1 | None | ERR2513571 | Sensitive | lineage4.6.2.2 | gb | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816133 | Other | La1.8.2 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6046860 | Other | lineage4.4.1.1 | None | ERR4817834 | Sensitive | lineage1.1.2 | gb | SRR6398013 | Other | lineage4.1.2 | ca | ERR4817853 | Other | lineage4.8.1 | None | ERR2512941 | Other | lineage1.1.2 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR2514295 | HR-TB | lineage3 | gb | ERR4817434 | Other | lineage3 | None | ERR2514692 | Other | M.orygis | None | SRR6045599 | Other | lineage4.8 | None | ERR4816086 | Other | lineage4.2.2.2 | None | SRR3675282 | Other | lineage3.1.2.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | SRR5485595 | RR-TB | None | SRR5818449 | MDR-TB | None | ERR4814951 | Pre-XDR-TB | lineage3.1.2 | gb | ERR2514514 | RR-TB | lineage3 | gb | ERR4819782 | Other | lineage1.2.1.2.1 | gb | SRR6045944 | Other | lineage4.1.2.1 | None | ERR4816450 | Sensitive | lineage4.1.1.3 | gb | ERR4816493 | Other | lineage4.1.2.1 | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4820713 | HR-TB | lineage4.8 | None | ERR4815034 | Sensitive | lineage4.1.2.1 | gb | ERR4822021 | Other | lineage4.8 | gb | ERR4816969 | Other | lineage4.8 | None | ERR2513298 | Other | lineage4.8 | gb | ERR4814874 | MDR-TB | lineage1.1.2 | None | ERR4822171 | Other | lineage3 | gb | ERR4816437 | Other | lineage3 | gb | ERR4820376 | HR-TB | lineage2.2.1 | gb | SRR8651566 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817213 | Other | lineage3 | gb | ERR4820328 | Other | lineage3 | gb | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4818988 | Other | lineage1 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | ERR4822085 | Other | lineage4.8 | gb | ERR4818629 | Other | lineage4.3.3;lineage3 | gb | ERR4816758 | Other | lineage4.8 | gb | SRR6044983 | Other | lineage3.1.1 | None | ERR4821746 | Other | lineage4.4.1.1 | gb | ERR4816191 | Other | lineage3.1.2 | gb | SRR5818410 | Sensitive | None | SRR6046457 | Other | lineage3 | gb | ERR4821563 | HR-TB | lineage1.1.2 | gb | ERR4814764 | HR-TB | lineage3 | gb | ERR2514550 | MDR-TB | lineage3 | gb | ERR4819093 | Other | lineage4.3.3 | None | ERR4816425 | Other | lineage2.2.2 | None | ERR4820334 | Other | lineage4.4.1.1 | gb | ERR4815917 | Other | lineage2.2.1 | gb | ERR2514673 | Other | lineage4.1.2.1 | gb | ERR4817874 | Other | lineage3 | None | ERR2513243 | Other | lineage3 | gb | ERR4816511 | Sensitive | lineage3 | gb |
|---|
