EBG00000313325 - n.1455C>T
Drug resistance types
34 Sensitive
21 RR-TB
33 HR-TB
29 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
129 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage3 | 29 |
| lineage2.2.1 | 36 |
| lineage4.3.4.1 | 2 |
| lineage4.8 | 19 |
| lineage4.3.3 | 5 |
| lineage3.1.2.2 | 1 |
| lineage3.1.2.1 | 7 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage1.1.3.1 | 2 |
| lineage4.1.2.1 | 26 |
| lineage4.6.5 | 2 |
| lineage4.3.2 | 3 |
| lineage4.9 | 17 |
| lineage5 | 2 |
| lineage2.1;lineage4.9 | 1 |
| lineage6.1.2 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage2.2.2 | 3 |
| M.canetti;lineage1 | 1 |
| lineage4.3.2.1 | 4 |
| lineage4.2.2.2 | 3 |
| lineage4.1.3 | 3 |
| lineage4.2.1 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.2.2 | 2 |
| lineage4.4.1.1 | 9 |
| lineage4.1.1.3 | 3 |
| La1.7;lineage4.9 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1.2 | 4 |
| La1.8.1 | 1 |
| lineage1.2.2.2 | 4 |
| lineage4.1.1.3.1 | 2 |
| lineage6.1.3 | 2 |
| lineage4.3.4.2 | 2 |
| lineage2.2.1.1 | 2 |
| lineage1.1.2 | 5 |
| lineage4.4.1.1.1 | 2 |
| lineage3.1.1 | 6 |
| lineage1.2.2 | 2 |
| lineage4.5 | 4 |
| lineage4.3.1 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.1.1 | 1 |
| lineage3;lineage4.9 | 2 |
| 3 | |
| lineage4.3.4.2.1 | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage2.2.1;lineage4 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage3;lineage4 | 1 |
| lineage3.1.2 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.8.2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.8.1 | 1 |
| La3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 251 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR5007165 | Other | lineage3 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR4821176 | Other | lineage2.2.1 | None | ERR4821331 | HR-TB | lineage4.8 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR4816476 | Other | lineage3.1.2.1 | None | SRR20969695 | HR-TB | lineage2.2.1;lineage4.5 | None | ERR4816243 | Sensitive | lineage3 | None | ERR4818489 | Other | lineage1.1.3.1 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR4818498 | Other | lineage3.1.2.1 | gb | ERR10796628 | Other | lineage4.3.3 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4819307 | Other | lineage4.3.2 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR4820817 | Other | lineage4.1.2.1 | None | SRR5818435 | Sensitive | lineage4.9 | None | ERR4815898 | Other | lineage3 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR4821310 | Other | lineage5 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR19304094 | Other | lineage6.1.2 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR10796615 | Other | lineage4.3.3;lineage4.9 | None | SRR6046020 | Other | lineage3 | None | ERR4816967 | Other | lineage5 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR4816667 | Other | lineage2.2.2 | None | ERR4816283 | Other | lineage4.1.2.1 | None | ERR4816425 | Other | lineage2.2.2 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR6044841 | Other | lineage4.9 | None | SRR6046246 | Other | lineage3 | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4814714 | Other | lineage3 | None | ERR4821334 | Other | lineage4.1.3 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR4815909 | Other | lineage4.8 | None | ERR4822176 | Other | lineage4.1.1.2 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818522 | Other | lineage3 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820397 | Other | lineage4.9 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR6046463 | Other | lineage4.4.1.1 | None | ERR4815104 | Sensitive | lineage4.8 | None | ERR4821488 | Sensitive | lineage4.1.3 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | SRR25515595 | HR-TB | lineage2.2.1 | None | SRR29385290 | MDR-TB | lineage2.2.1 | None | SRR20969980 | HR-TB | lineage2.2.1 | None | SRR10869285 | Pre-XDR-TB | lineage2.2.2 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR867544 | Other | lineage4.9 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | ERR4819699 | HR-TB | lineage4.6.2.2 | gb | ERR4820026 | Other | lineage3 | None | ERR4820968 | Sensitive | lineage4.1.2.1 | gb | ERR4818556 | Sensitive | lineage3 | None | SRR1181403 | Other | lineage4.9 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070223 | HR-TB | lineage3 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR4815285 | HR-TB | lineage2.2.1 | None | ERR2515055 | Sensitive | lineage3 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR4586795 | Other | La1.8.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR2513830 | RR-TB | lineage4.8 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR10796626 | Other | lineage4.1.2.1 | None | ERR3806588 | Other | lineage6.1.3 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4817834 | Sensitive | lineage1.1.2 | gb | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4820266 | Sensitive | lineage3 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR6044983 | Other | lineage3.1.1 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | SRR7070369 | Other | lineage1.2.2.2 | None | ERR2512986 | Other | lineage3 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4814952 | Sensitive | lineage3 | None | ERR4815034 | Sensitive | lineage4.1.2.1 | gb | ERR4814874 | Sensitive | lineage1.1.2 | None | ERR4818126 | Other | lineage1.2.2 | None | ERR4820328 | Other | lineage3 | gb | ERR4815425 | Other | lineage4.5 | gb | SRR3675461 | RR-TB | lineage4.9 | None | ERR4817464 | Sensitive | lineage3.1.1 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR4821811 | Sensitive | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR7069030 | Other | lineage3 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR5818429 | Sensitive | lineage4.9 | None | SRR7069319 | Other | lineage4.5 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR2513056 | HR-TB | lineage4.1.2.1 | gb | ERR2514279 | Sensitive | lineage3 | gb | ERR4820265 | Other | lineage4.1.2.1 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | ERR4821746 | Sensitive | lineage4.4.1.1 | gb | ERR3077903 | HR-TB | lineage2.2.1 | None | DRR185000 | Other | lineage1.1.1.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR10796578 | Other | lineage2.2.1 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4818691 | Other | lineage4.8 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818128 | Other | lineage4.1.2.1 | None | ERR4820690 | Sensitive | lineage4.1.1 | gb | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR4821958 | Other | lineage4.3.3 | gb | ERR2509886 | Other | lineage3 | None | SRR1238558 | Other | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR4814767 | MDR-TB | lineage2.2.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796577 | Other | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR11342695 | MDR-TB | lineage4.8 | None | ERR4817060 | Other | None | SRR11342646 | HR-TB | lineage3 | None | SRR18572454 | RR-TB | lineage4.9 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4819615 | Other | lineage4.3.4.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR25515437 | HR-TB | lineage2.2.1 | None | ERR4816690 | Other | None | ERR2514173 | Other | lineage4.5 | gb | ERR4829835 | HR-TB | lineage4.8 | it | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR4816362 | HR-TB | lineage2.2.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR4819766 | Other | lineage4.4.1.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR2513401 | HR-TB | lineage3 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | ERR4819017 | Other | lineage3 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR11342669 | Other | lineage4.8 | None | ERR4819456 | Other | lineage4.8 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR7069518 | Other | lineage4.8 | None | SRR25534346 | HR-TB | lineage2.2.1 | None | ERR4829208 | Other | lineage4.8 | None | SRR7069784 | Other | lineage1.2.2.2 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4820959 | Other | lineage4.1.2.1 | None | SRR25515745 | HR-TB | lineage2.2.1 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | ERR2514550 | MDR-TB | lineage3 | gb | SRR11342686 | MDR-TB | lineage4.8 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR6046521 | Other | lineage4.4.1.1 | None | ERR4820376 | HR-TB | lineage2.2.1 | gb | ERR4814356 | Other | lineage3.1.2 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR2512606 | HR-TB | lineage3 | None | ERR161037 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR20969978 | HR-TB | lineage2.2.1 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4815334 | Other | lineage3.1.1 | None | ERR4818988 | Other | lineage1.2.2 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4817584 | Other | lineage3;lineage4.9 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | ERR4821341 | Other | lineage4.3.4.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4816510 | Other | lineage4.1.2.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR6046159 | Other | lineage4.8.2 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4821360 | Sensitive | lineage4.1.2.1 | None | SRR6046442 | Other | lineage3 | None | ERR4818763 | Other | lineage3 | gb | ERR2514692 | Other | None | SRR6046291 | Other | lineage3 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | ERR10796635 | Other | lineage4.8 | None | ERR4816429 | Other | lineage1.1.2 | None | SRR10808730 | Other | lineage4.9 | None | ERR2514565 | Sensitive | lineage3.1.2.1 | gb | ERR2514514 | Other | lineage3 | gb | ERR4809049 | Sensitive | lineage4.1.2 | za | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR5007170 | Other | lineage4.9 | None | SRR5818672 | Other | lineage1.2.2.2 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR10796599 | Other | lineage4.8 | None | ERR4820777 | Sensitive | lineage4.1.2.1 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | ERR4815811 | Other | lineage4.2.1.1 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR7069314 | Other | lineage3 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4818825 | HR-TB | lineage4.1.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR181744 | HR-TB | La3;lineage4.9 | None |
|---|
