EBG00000313325 - n.752G>A
Drug resistance types
34 Sensitive
17 RR-TB
19 HR-TB
41 MDR-TB
25 Pre-XDR-TB
0 XDR-TB
212 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 86 |
| lineage4.1.1.3.1 | 2 |
| lineage2.2.1 | 64 |
| lineage3 | 23 |
| lineage4.3.4.1 | 3 |
| lineage4.1.2.1 | 27 |
| lineage4.3.3 | 16 |
| lineage4.2.1.1 | 2 |
| lineage4.3.4.2 | 7 |
| La1.7;lineage4.9 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.2.2.1 | 2 |
| lineage5 | 1 |
| lineage4.3.2 | 3 |
| lineage4.3.4.2.1 | 5 |
| lineage4.8 | 20 |
| lineage4.4.1.1 | 6 |
| lineage4.6.5 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.2.2 | 1 |
| lineage2;lineage4 | 1 |
| lineage1.1.2 | 13 |
| lineage2.2.2 | 5 |
| lineage4.5 | 3 |
| lineage1.2.2.2 | 3 |
| lineage4.2.1 | 2 |
| lineage2.2.1.1 | 4 |
| lineage4.4 | 1 |
| lineage4.4.2 | 2 |
| lineage4 | 2 |
| lineage5.1.1 | 1 |
| lineage4.2.2.2 | 3 |
| lineage6.1.2 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage3.1.1 | 2 |
| lineage4.4.1.1.1 | 2 |
| La1.3 | 1 |
| lineage4.1.1.3 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.8.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.6.2.2 | 2 |
| lineage6.1.3 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.1.1 | 1 |
| La2 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.3 | 1 |
| lineage4.7 | 3 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.1.3 | 1 |
| lineage3.1.2.1 | 2 |
| lineage2.2.1;lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 348 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5818457 | Other | lineage4.9 | None | SRR7070251 | Sensitive | lineage4.1.1.3.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR5818460 | Other | lineage4.9 | None | ERR4821731 | Other | lineage3 | gb | ERR10796556 | Other | lineage4.3.4.1 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7131198 | Other | lineage4.3.3 | None | SRR7070521 | Other | lineage4.2.1.1 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4816692 | Other | lineage4.1.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR10796615 | Other | lineage4.3.3;lineage4.9 | None | ERR4817047 | Sensitive | lineage4.2.2.1 | gb | ERR4816967 | Other | lineage5 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR176605 | HR-TB | lineage4.3.4.2.1 | mw | ERR6359069 | Sensitive | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR9117805 | Other | lineage4.3.2 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR6045928 | Other | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | SRR5818437 | RR-TB | lineage4.9 | None | SRR19303815 | Other | lineage4.8 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | SRR6044904 | Other | lineage3 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR15014663 | MDR-TB | lineage1.1.2 | None | SRR7131234 | Other | lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR7069959 | Other | lineage4.5 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR10796577 | Other | lineage4.9 | None | SRR6046442 | Other | lineage3 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR5818440 | Other | lineage4.9 | None | SRR7068927 | Other | lineage1.2.2.2 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR10796635 | Other | lineage4.8 | None | SRR11342646 | HR-TB | lineage3 | None | ERR4820028 | Sensitive | lineage4.3.3 | None | SRR1173281 | Other | lineage3 | None | SRR6044815 | Other | lineage4.9 | None | SRR6046729 | Other | lineage3 | None | ERR4819615 | Other | lineage4.3.4.2.1 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR6044787 | Sensitive | lineage4.4 | None | SRR7131061 | Other | lineage2.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4.9 | None | SRR6045986 | Other | lineage3 | None | SRR6046141 | Other | lineage4.9 | None | SRR11348154 | RR-TB | lineage1.1.2 | None | ERR4816009 | Other | lineage1.1.2 | None | SRR16149126 | MDR-TB | lineage4.2.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR1173656 | Sensitive | lineage1.1.2 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR4818663 | Other | lineage3 | None | ERR4819948 | Other | lineage4.4.1.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR3675565 | Other | lineage4 | None | ERR751345 | Other | lineage5.1.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR7131068 | Other | lineage4.8 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR5818456 | Other | lineage4.9 | None | SRR5818385 | Other | lineage4.9 | None | ERR4820959 | Other | lineage4.1.2.1 | None | SRR7069946 | Other | lineage4.8 | None | ERR4818192 | Other | lineage4.1.2.1 | gb | ERR10796618 | Other | lineage4.3.4.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR19304094 | Other | lineage6.1.2 | None | SRR5818386 | Other | lineage4.9 | None | SRR7070293 | Other | lineage4.8 | None | SRR5818458 | Other | lineage4.9 | None | SRR6046020 | Other | lineage3 | None | SRR19304104 | Other | lineage4.8 | None | SRR3675582 | Other | lineage4.9 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | ERR11067866 | Sensitive | lineage1.1.2 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR2510796 | HR-TB | lineage4.3.4.2 | it | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820188 | Other | lineage3 | gb | ERR2027230 | Other | lineage4.2.2.2 | None | SRR7131232 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023509 | Other | lineage4.9 | None | SAMN02599094 | Sensitive | lineage1.1.2 | None | SRR5818425 | Other | lineage4.9 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR4769480 | Other | La1.3 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818409 | Other | lineage4.9 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817826 | Other | lineage4.5 | None | SRR18002926 | Other | lineage2.2.1 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR4816510 | Other | lineage4.1.2.1 | None | SRR7069074 | Other | lineage3 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4816464 | Other | lineage3 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR19303899 | Other | lineage3 | None | ERR11465333 | Sensitive | lineage4.3.4.2.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR7070144 | Other | lineage4.8 | None | SRR6045743 | Other | lineage3 | None | SRR5818469 | Other | lineage4.9 | None | SRR7131216 | Other | lineage4.1.2.1 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4820907 | Other | lineage4.1.2.1 | gb | SRR7131297 | Other | lineage1.2.1.2 | None | ERR9786076 | Sensitive | lineage3 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR18002956 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | ERR10796599 | Other | lineage4.8 | None | SRR12062551 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818396 | Other | lineage4.9 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR5818422 | Other | lineage4.9 | None | ERR4815204 | Other | lineage2.2.1.1 | gb | ERR4815471 | Sensitive | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818439 | Sensitive | lineage4.9 | None | ERR4816493 | Other | lineage4.1.2.1 | None | SRR5818411 | RR-TB | lineage4.9 | None | ERR10796591 | Other | lineage4.9 | None | SRR5818423 | RR-TB | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR4819770 | Other | lineage4.8 | gb | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | ERR10796560 | Other | lineage4.9 | None | SRR22250223 | HR-TB | lineage1.2.1.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR1173008 | Sensitive | lineage1.1.2 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR7068941 | Other | lineage4.8.2 | None | SRR5818404 | Other | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR5818442 | Sensitive | lineage4.9 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | ERR2984782 | Pre-XDR-TB | lineage4.3.3 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR2600562 | MDR-TB | lineage2.2.1;lineage4.8 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR2510794 | Other | lineage4.3.4.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR4820720 | Other | lineage4.1.2.1 | None | SRR5818393 | Other | lineage4.9 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6046839 | Other | lineage4.9 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR3675265 | Other | lineage4 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR10796640 | Other | lineage4.1.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR11342669 | Other | lineage4.8 | None | SRR6046210 | Other | lineage4.9 | None | ERR4819456 | Other | lineage4.8 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR7070461 | Other | lineage3 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | SRR7131161 | Other | lineage4.8 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR18003038 | Other | lineage2.2.1 | None | ERR867555 | Other | lineage3 | None | ERR10796581 | Other | lineage4.1.2 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR5074710 | Sensitive | lineage4.3.3 | None | ERR10796620 | Other | lineage4.1.1.1 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR4817926 | HR-TB | lineage4.6.2.2 | gb | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR5818445 | Other | lineage4.9 | None | SRR7069082 | Other | lineage4.1.2.1 | None | SRR19303949 | Other | lineage4.3.3 | None | SRR19303818 | Other | lineage4.3.4.2 | None | ERR4819567 | Other | lineage2.2.1 | None | SRR5818426 | Other | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR5818410 | Sensitive | lineage4.9 | None | ERR4814700 | Other | lineage4.3.3 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR18002945 | Other | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR3675509 | Other | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818391 | Other | lineage4.9 | None | SRR5818402 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818462 | Other | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | ERR10796593 | Other | lineage4.3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR6045261 | Other | lineage1.1.2 | gb | SRR6046646 | Other | lineage4.7 | gb | SRR10272566 | Sensitive | lineage4.3.3 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796568 | Other | lineage4.9 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR7070154 | Other | lineage4.4.1.1 | None | ERR10796553 | Other | lineage4.9 | None | ERR4829359 | Sensitive | lineage4.7 | None | SRR18002906 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070407 | Other | lineage4.1.2.1 | None | SRR5818408 | Other | lineage4.9 | None | SRR6045384 | Other | lineage4.1.2.1 | None | ERR10796598 | Other | lineage4.9 | None | SRR11348155 | Sensitive | lineage1.1.2 | None | ERR3276155 | Other | lineage4.1.2.1 | nl | ERR10796566 | Other | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR7069783 | Other | lineage4.1.2.1 | None | ERR736831 | Other | lineage4.9 | None | SRR7070134 | Other | lineage3.1.1 | None | ERR2229148 | Other | lineage4.8 | dk | SRR10321140 | Sensitive | lineage1.1.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18913779 | Sensitive | lineage3 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR15014696 | MDR-TB | lineage1.1.2 | None | ERR10796632 | Other | lineage4.3.3 | None | SRR15014666 | Pre-XDR-TB | lineage1.1.2 | None | SRR19303907 | Other | lineage4.8 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR7069314 | Other | lineage3 | None | ERR4821719 | Other | lineage3 | gb | SRR18002930 | MDR-TB | lineage2.2.1 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4819720 | Other | lineage3.1.2.1 | gb | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR7069922 | Other | lineage2.2.1 | None | SRR17856678 | Sensitive | lineage1.1.2 | None | SRR5818414 | Other | lineage4.9 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR3675513 | Other | lineage4.8 | None | SRR7070553 | Other | lineage3 | None | ERR6866241 | Other | lineage4.3.2 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | ERR4820889 | Other | lineage3 | gb | ERR10796634 | Other | lineage4.7 | None | SRR7131237 | Other | lineage2.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR5908124 | Other | lineage4.8 | None | SRR7131196 | Other | lineage4.8 | None | SRR19303817 | Other | lineage2.2.1 | None |
|---|
