EBG00000313325 - n.1356delA
Drug resistance types
44 Sensitive
3 RR-TB
58 HR-TB
8 MDR-TB
25 Pre-XDR-TB
1 XDR-TB
218 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2.1 | 5 |
| lineage2.2.1 | 38 |
| lineage4.1.1.3.1 | 1 |
| lineage4.1.3 | 4 |
| lineage4.9 | 97 |
| lineage4.3.4.1 | 3 |
| lineage3 | 20 |
| lineage2.2.2;lineage4 | 8 |
| lineage4.5 | 7 |
| lineage2.2.2;lineage4.9 | 1 |
| lineage2;lineage4.9 | 2 |
| lineage4.8 | 13 |
| lineage4.1.2 | 4 |
| lineage2.2.2 | 19 |
| lineage4.3.1.1 | 1 |
| lineage4.7 | 6 |
| lineage4.1.2.1 | 16 |
| lineage1.1.2 | 8 |
| lineage4.8.1 | 3 |
| lineage4.4.2 | 5 |
| lineage4.3.3 | 13 |
| lineage2.2.1.1 | 5 |
| lineage1.2.2.2 | 6 |
| lineage2.2.1;lineage4 | 3 |
| lineage4.6.1.1 | 2 |
| lineage3.1.1 | 3 |
| lineage4.1.4 | 4 |
| lineage4.6.2.2 | 2 |
| lineage4.2.2 | 4 |
| lineage1.1.3.2 | 2 |
| lineage3.1.2.1;lineage4 | 2 |
| lineage2.2.1;lineage2.2.2 | 5 |
| lineage4.3.2.1 | 1 |
| lineage2.2;lineage4 | 2 |
| lineage4.1.1.3 | 3 |
| lineage4.2.2.1 | 1 |
| lineage4 | 3 |
| lineage1.2.2.1 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage3.1.2 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.1 | 1 |
| lineage3;lineage4.9 | 2 |
| lineage1.1.3.1 | 3 |
| lineage2.2.1.1;lineage4 | 1 |
| lineage2.2;lineage4.9 | 2 |
| lineage4.3.2 | 1 |
| lineage6.2.3 | 1 |
| lineage4.2.1 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage3.1.3 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.2.1;lineage4.8 | 1 |
| lineage2 | 1 |
| lineage4.3;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| lineage6.1.2 | 1 |
| lineage4.6.3 | 1 |
| lineage5.1.4 | 1 |
| lineage4.1 | 1 |
| La3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 357 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7070525 | Other | lineage4.3.4.2.1 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | ERR4821263 | Other | lineage4.1.3 | gb | SRR1183281 | Other | lineage4.9 | None | SRR1183297 | Other | lineage4.9 | None | SRR1208297 | Other | lineage4.9 | None | ERR4821530 | Other | lineage4.3.4.1 | None | SAMN02360577 | HR-TB | lineage3 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | ERR5865950 | MDR-TB | lineage2.2.1 | None | SRR1013597 | Sensitive | lineage2.2.2;lineage4 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR22250261 | Sensitive | lineage4.5 | None | SRR1184379 | Other | lineage2.2.2;lineage4.9 | None | SRR1048991 | HR-TB | lineage2;lineage4.9 | None | ERR4829313 | XDR-TB | lineage4.8 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR1208721 | Other | lineage4.9 | None | ERR4814362 | Other | lineage4.8 | None | SRR1202713 | Sensitive | lineage4.9 | None | SRR1013622 | Pre-XDR-TB | lineage2.2.2 | None | SRR1208277 | Other | lineage4.9 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1181147 | Other | lineage4.9 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013612 | Sensitive | lineage4.5 | None | SRR6045071 | Other | lineage4.3.1.1 | None | ERR4819456 | Other | lineage4.8 | None | SRR7131123 | Other | lineage4.8 | None | ERR4820679 | Other | lineage4.8 | None | SRR1202728 | Other | lineage4.9 | None | SRR3675491 | Other | lineage4.7 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR2513681 | Other | lineage1.1.2 | None | SRR1182925 | Other | lineage4.9 | None | SRR1180599 | Other | lineage4.9 | None | ERR4817853 | Other | lineage4.8.1 | None | ERR867555 | Other | lineage3 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | SRR1182954 | Other | lineage4.9 | None | SRR1183418 | Other | lineage4.9 | None | ERR11466424 | HR-TB | lineage4.3.4.2.1 | None | SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None | SRR1013583 | Sensitive | lineage2.2.2 | None | SRR1202406 | Sensitive | lineage4.9 | None | SRR1180686 | Other | lineage4.9 | None | SRR1202702 | Other | lineage4.9 | None | SRR7070293 | Other | lineage4.8 | None | ERR4815832 | Other | lineage3 | None | ERR4817569 | Other | lineage4.3.4.1 | None | ERR4819192 | Other | lineage3 | None | SRR1013607 | HR-TB | lineage2.2.2 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR1048982 | HR-TB | lineage2.2.1.1 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SRR7070276 | Other | lineage3 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046246 | Other | lineage3 | None | SRR5007155 | Sensitive | lineage4.1.2.1 | None | SRR1208694 | Sensitive | lineage4.9 | None | ERR4822181 | Other | lineage4.8 | None | ERR4816883 | Other | lineage4.5 | None | SRR1013608 | Sensitive | lineage2.2.2 | None | ERR270771 | HR-TB | lineage3 | None | SRR1049041 | HR-TB | lineage2.2.1;lineage4 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | ERR4818187 | Other | lineage4.6.1.1 | gb | SRR1013578 | HR-TB | lineage2.2.2;lineage4 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR30182591 | Sensitive | lineage3 | None | SRR1013581 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815334 | Other | lineage3.1.1 | None | ERR4819683 | Other | lineage4.1.4 | None | ERR4819641 | Other | lineage4.6.2.2 | None | SRR1019127 | Other | lineage4.9 | None | ERR4816043 | Other | lineage4.2.2 | None | ERR4819553 | Other | lineage4.1.4 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4822032 | Other | lineage2.2.1 | gb | SRR6045158 | Other | lineage4.9 | None | SRR1209022 | Other | lineage4.9 | None | SRR1013600 | Sensitive | lineage2.2.1.1 | None | ERR2509885 | Other | lineage3 | None | SRR1183669 | Other | lineage4.9 | None | SRR1181592 | Other | lineage4.9 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR7821182 | Other | lineage1.1.3.2 | None | SRR1209038 | Sensitive | lineage4.9 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4817795 | Other | lineage4.7 | gb | SRR1208611 | Other | lineage4.9 | None | ERR4819377 | Other | lineage3.1.2.1;lineage4 | None | SRR1180213 | Other | lineage4.9 | None | SRR1048968 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1208486 | Other | lineage4.9 | None | SRR1208553 | Other | lineage4.9 | None | SRR1175304 | HR-TB | lineage4.3.3 | None | ERR11465250 | Sensitive | lineage2.2.1 | None | SRR7131122 | Other | lineage2.2.1 | None | ERR4821222 | Other | lineage4.3.2.1 | None | SRR1180831 | Other | lineage4.9 | None | SRR1180831 | Other | lineage4.9 | None | SRR6044993 | Other | lineage3 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | SRR1048985 | HR-TB | lineage2.2.1 | None | SRR1048992 | HR-TB | lineage2.2;lineage4 | None | SRR1183076 | Other | lineage4.9 | None | SRR6046766 | Other | lineage3.1.1 | None | ERR4815837 | Other | lineage4.1.4 | gb | ERR4820318 | Other | lineage4.2.2 | None | ERR4820827 | Other | lineage4.1.2 | None | ERR4817497 | Other | lineage1.1.2 | None | SRR1048886 | HR-TB | lineage2.2.2;lineage4 | None | SRR1049007 | HR-TB | lineage2.2.2 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048996 | Sensitive | lineage4.5 | None | SRR1208756 | Other | lineage4.9 | None | SRR9971369 | MDR-TB | lineage4.1.1.3 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR2027256 | Other | lineage4.1.2 | None | SRR1183438 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | ERR4817547 | Other | lineage4.2.2.1 | None | SRR1048980 | HR-TB | lineage3 | None | ERR4817046 | Other | lineage3 | None | SRR1013609 | Sensitive | lineage4 | None | SRR1013611 | Sensitive | lineage4.5 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180482 | Other | lineage4.9 | None | SRR1208526 | Sensitive | lineage4.9 | None | ERR4817479 | Other | lineage4.1.3 | None | ERR4818008 | Other | lineage4.3.3 | None | SRR1208880 | Other | lineage4.9 | None | SRR1209015 | Sensitive | lineage4.9 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR4819073 | Other | lineage4.1.2.1 | None | SRR1724013 | Other | lineage4.2.2 | cn | SRR1208588 | Other | lineage4.9 | None | SRR1013602 | HR-TB | lineage2.2.1 | None | SRR1140942 | Other | lineage2.2.1;lineage4 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4819131 | Other | lineage4.8 | None | ERR10796562 | Other | lineage4.3.4.1 | None | SRR1183185 | Other | lineage4.9 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1202414 | Sensitive | lineage4.9 | None | SRR1181589 | Other | lineage4.9 | None | SRR1181589 | Other | lineage4.9 | None | SRR1013577 | HR-TB | lineage2.2.2 | None | SRR1173416 | Sensitive | lineage4.9 | None | SRR1181269 | Other | lineage4.9 | None | SRR1013598 | Sensitive | lineage2.2.2;lineage4 | None | SRR1208759 | Sensitive | lineage4.9 | None | SRR1181224 | Other | lineage4.9 | None | ERR4815225 | Other | lineage1.2.2.2 | None | ERR4822280 | Other | lineage4.1.3 | None | SRR1181236 | Other | lineage4.9 | None | SRR1208892 | Sensitive | lineage4.9 | None | SRR1183302 | Other | lineage4.9 | None | ERR4815101 | Other | lineage3 | gb | SRR7070369 | Other | lineage1.2.2.2 | None | SRR6045683 | Other | lineage3.1.2.1;lineage4 | None | SRR1202706 | Other | lineage4.9 | None | SRR7069628 | Other | lineage4.1.2.1 | None | SRR1202714 | Sensitive | lineage4.9 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR2660505 | Other | lineage1.2.2.1 | None | SRR1048983 | HR-TB | lineage2.2.1.1 | None | SRR1183445 | Other | lineage4.9 | None | SAMN02360571 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1208639 | Other | lineage4.9 | None | ERR4819012 | Other | lineage1.1.2 | None | SRR1208648 | Sensitive | lineage4.9 | None | SRR7131160 | Sensitive | lineage3 | None | ERR4815425 | Other | lineage4.5 | gb | ERR4820107 | Other | lineage1.2.1.2.1 | None | SRR1048869 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1013613 | Sensitive | lineage2.2.1 | None | ERR4821887 | Other | lineage4.1.2.1 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1183149 | Other | lineage4.9 | None | ERR9117714 | Other | lineage3.1.2 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | SRR1013554 | MDR-TB | lineage2.2.2;lineage4 | None | ERR4821334 | Other | lineage4.1.3 | None | SRR6046359 | Other | lineage4.7 | None | SRR1183224 | Other | lineage4.9 | None | SRR1013595 | Sensitive | lineage3 | None | SRR1013629 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815265 | Other | lineage2.2.1 | None | SRR1183548 | Other | lineage4.9 | None | ERR4817086 | Other | lineage1.2.2.2 | gb | ERR4817189 | Other | lineage4.7 | None | SRR4034769 | Other | lineage4.1.1.1 | None | SRR1208798 | Other | lineage4.9 | None | ERR4815956 | Other | lineage1.1.2 | None | SRR11972323 | Other | lineage1.1.3.2 | None | SRR21240064 | Sensitive | lineage4.3.3 | None | SRR1048853 | HR-TB | lineage2;lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR4816397 | Other | lineage1.1.2 | None | ERR4822105 | Other | lineage4.1.4 | None | ERR4829314 | Other | lineage4.1.2.1 | None | SRR1180047 | Other | lineage4.9 | None | SRR1180047 | Other | lineage4.9 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR11465507 | Sensitive | lineage4.3.4.2.1 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4814617 | Other | lineage1.1.3.1 | None | SRR1013599 | HR-TB | lineage2.2.1.1;lineage4 | None | SRR1202708 | Other | lineage4.9 | None | SRR6045289 | Other | lineage2.2;lineage4.9 | None | SAMN02360562 | Pre-XDR-TB | lineage4.4.2 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR7131169 | Other | lineage4.1.2.1 | None | ERR4815197 | Other | lineage4.9 | None | ERR4817987 | Other | lineage4.7 | None | ERR4821791 | Other | lineage4.1.2.1 | None | ERR4819491 | Other | lineage4.1.2.1 | None | SRR1048966 | MDR-TB | lineage2.2.1 | None | ERR9117681 | Sensitive | lineage4.3.3 | None | SRR1183373 | Other | lineage4.9 | None | SRR1180154 | Other | lineage4.9 | None | SRR1181358 | Other | lineage4.9 | None | SRR1181358 | Other | lineage4.9 | None | SRR1048981 | HR-TB | lineage3 | None | SRR1048969 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180105 | Other | lineage4.9 | None | ERR4820787 | Other | lineage3.1.1 | gb | SRR1013621 | Pre-XDR-TB | lineage2.2.2 | None | SRR1208911 | Sensitive | lineage4.9 | None | SRR1208536 | Other | lineage4.9 | None | SRR1208925 | Other | lineage4.9 | None | ERR4818637 | Other | lineage4.8 | None | ERR4819087 | Other | lineage4.3.3 | None | SRR1208682 | Other | lineage4.9 | None | SRR1208836 | Other | lineage4.9 | None | ERR4815795 | Other | lineage1.1.2 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR1209004 | Sensitive | lineage4.9 | None | ERR4814783 | Other | lineage4.7 | None | ERR4815905 | Other | lineage1.2.2.2 | gb | ERR3148546 | Other | lineage4.3.2 | None | ERR10796630 | Other | lineage6.2.3 | None | SRR7070665 | HR-TB | lineage3 | None | SRR5007165 | Other | lineage3 | None | ERR4817958 | Other | lineage4.2.1 | None | ERR4817703 | Other | lineage1.1.1.1 | None | ERR4820187 | Other | lineage4.3.3 | None | SRR1180687 | Other | lineage4.9 | None | SRR1013601 | HR-TB | lineage2.2.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR1180578 | Other | lineage4.9 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR1048994 | HR-TB | lineage4.9 | None | ERR4814986 | Other | lineage4.3.4.2 | None | ERR553231 | Other | lineage4.1.2.1 | None | ERR4829208 | Other | lineage4.8 | None | SRR7069704 | Sensitive | lineage4.3.3 | None | SRR1202656 | Sensitive | lineage4.9 | None | SRR1013596 | Sensitive | lineage3 | None | ERR4820967 | Other | lineage3;lineage4.9 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | SRR1208562 | Other | lineage4.9 | None | SRR1202384 | Other | lineage4.9 | None | ERR4816782 | Other | lineage4.1.2.1 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | ERR4818188 | Other | lineage4.1.2.1 | None | ERR4819206 | Other | lineage4.8 | None | SRR1180801 | Other | lineage4.9 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181267 | Other | lineage4.9 | None | SRR6045553 | Other | lineage4.1.2.1;lineage4.9 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR1013565 | Pre-XDR-TB | lineage4.4.2 | None | SRR1013568 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013553 | MDR-TB | lineage2.2.2 | None | SRR1048866 | Pre-XDR-TB | lineage4.4.2 | None | SRR1180113 | Other | lineage4.9 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048885 | HR-TB | lineage2.2;lineage4 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR1208763 | Other | lineage4.9 | None | SRR1208891 | Other | lineage4.9 | None | SRR7645808 | HR-TB | lineage4.2.1;lineage4.8 | None | ERR4818465 | Other | lineage3 | gb | ERR245801 | Other | lineage4.3.4.2.1 | None | SRR7645900 | Sensitive | lineage4.8 | None | SRR1049040 | HR-TB | lineage2 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4820060 | Other | lineage4.3.3 | None | ERR4820264 | Other | lineage1.1.2 | None | ERR4815005 | Other | lineage4.1.2.1 | None | SAMN02360585 | HR-TB | lineage4.5 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SRR1013584 | HR-TB | lineage2.2.2 | None | SRR1173113 | Other | lineage4.3;lineage4.9 | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | ERR1199064 | Sensitive | lineage4.6.1.1 | ug | ERR4816828 | Other | lineage1.1.1 | gb | ERR4818471 | Other | lineage2.2.1 | None | SRR1048870 | HR-TB | lineage2.2.1;lineage2.2.2 | None | ERR4818787 | Other | lineage6.1.2 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | ERR736816 | Other | lineage4.9 | None | SRR1183610 | Other | lineage4.9 | None | SRR1183720 | Other | lineage4.9 | None | SRR1180192 | Other | lineage4.9 | None | SRR1202378 | Other | lineage4.9 | None | ERR4817368 | Other | lineage4.6.3 | None | ERR10796580 | Other | lineage4 | None | ERR4814761 | Other | lineage4.8 | gb | SRR1013610 | Sensitive | lineage4 | None | SRR1013618 | RR-TB | lineage2.2.1;lineage4 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | ERR4815684 | Other | lineage5.1.4 | gb | ERR2179565 | Other | lineage4.2.2 | cn | SRR1048988 | HR-TB | lineage2.2.1 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1183538 | Other | lineage4.9 | None | SRR1049026 | HR-TB | lineage2.2;lineage4.9 | None | ERR4814930 | Other | lineage4.4.1.1 | None | SRR1181422 | Other | lineage4.9 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | ERR11466423 | HR-TB | lineage4.3.4.2.1 | None | ERR4815137 | Other | lineage4.1 | gb | SRR1144759 | HR-TB | lineage2.2.2;lineage4 | None | ERR4822170 | Other | lineage4.1.1.3 | None | SRR1013566 | Pre-XDR-TB | lineage4.4.2 | None | SRR1208476 | Other | lineage4.9 | None | SRR21277822 | Sensitive | lineage2.2.1.1 | None | SRR1183128 | Other | lineage4.9 | None | SRR1049006 | HR-TB | lineage2.2.2;lineage4 | None | SRR1208539 | Sensitive | lineage4.9 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | ERR8665825 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013630 | Pre-XDR-TB | lineage2.2.2;lineage4 | None | SRR1173521 | Other | lineage4.9 | None | ERR10796625 | Other | lineage4.4.1.1 | None | ERR4816429 | Other | lineage1.1.2 | None | ERR4815452 | Other | lineage4.3.3 | None | SRR1202404 | Other | lineage4.9 | None | SRR1208173 | Sensitive | lineage4.9 | None | SRR1208281 | Sensitive | lineage4.9 | None | SRR7755643 | Pre-XDR-TB | lineage4.2.1 | None | ERR11466463 | Sensitive | lineage4.8.1 | None | ERR4820543 | Other | La3 | None | SRR1144809 | HR-TB | lineage2.2.1 | None |
|---|
