EBG00000313325 - n.1236C>T
Drug resistance types
140 Sensitive
71 RR-TB
35 HR-TB
48 MDR-TB
19 Pre-XDR-TB
0 XDR-TB
361 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.4 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.8.1 | 3 |
| lineage4.1.1.3 | 6 |
| La1.8.1 | 8 |
| lineage4.3.3 | 19 |
| lineage4.1.2.1;lineage4.9 | 2 |
| lineage4.1.2 | 9 |
| lineage4.1.2.1 | 52 |
| lineage2.2.2 | 8 |
| lineage2.2.1 | 68 |
| lineage4.3.2.1 | 10 |
| lineage3.1.2.1 | 8 |
| lineage4.8 | 93 |
| lineage3 | 66 |
| lineage4.4.1.2 | 2 |
| lineage1.2.2.2 | 6 |
| lineage3.1.2 | 4 |
| lineage4.3.2 | 3 |
| lineage4.6.2.2 | 14 |
| lineage1.2.1.1 | 2 |
| lineage4.1 | 2 |
| lineage1.1.2 | 9 |
| lineage1.1.3.1 | 8 |
| lineage4.3.4.2.1 | 10 |
| lineage3.1.2.2 | 3 |
| lineage4.1.3 | 5 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage3.1.1;lineage4 | 1 |
| La3 | 1 |
| lineage5.1.1 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.3.1.1 | 3 |
| lineage4.9 | 63 |
| lineage6.3.1 | 2 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.6.1.2 | 1 |
| lineage4.2.1 | 8 |
| lineage4.2.2.2 | 9 |
| lineage4.1.1.1 | 7 |
| lineage4.1.1.3.1 | 2 |
| lineage1.1.3.2 | 6 |
| lineage3.1.1 | 13 |
| lineage3.1 | 1 |
| lineage4.5 | 7 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.3.4.1 | 9 |
| lineage4.4.1.1 | 18 |
| lineage1.2.2 | 2 |
| lineage4 | 4 |
| lineage4.7 | 6 |
| lineage1.1 | 1 |
| lineage6.1.2 | 2 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| La1.8.2 | 1 |
| lineage4.8.2 | 1 |
| 3 | |
| La1.7.1 | 1 |
| lineage1.2.1.2.1 | 5 |
| La1.6 | 4 |
| lineage1.1.1.1 | 3 |
| lineage4.3.4.2 | 5 |
| lineage4.4.2 | 4 |
| lineage6.1.3 | 2 |
| lineage2.2.1.1 | 4 |
| lineage4.1.4 | 1 |
| lineage4.2.2.1 | 1 |
| lineage3.1.3;lineage4.9 | 1 |
| lineage1.1.3.3 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage3.1.3 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.3.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.6 | 2 |
| lineage4.9;lineage5.1.1 | 1 |
| lineage3;lineage4.9 | 4 |
| lineage3;lineage4 | 2 |
| lineage4.6.5 | 4 |
| lineage4.1.1 | 2 |
| lineage1.2.2.1 | 1 |
| lineage5 | 3 |
| lineage4.9.1 | 2 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 3 |
| lineage4.2.2 | 2 |
| M.canetti;lineage2.1 | 1 |
| lineage6.2.3 | 1 |
| La1.3 | 2 |
| lineage1.1.1 | 1 |
| La1.3;lineage1.2.2.2 | 1 |
| lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 674 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR16278292 | Other | La1.4 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR1815548 | Other | La1.8.1 | None | ERR2513819 | Pre-XDR-TB | lineage4.3.3 | gb | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR4815118 | Other | lineage2.2.2 | None | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR4829328 | Other | lineage2.2.1 | None | SRR6982362 | Sensitive | lineage4.3.2.1 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR7069441 | Sensitive | lineage4.8 | None | ERR2514261 | Other | lineage3 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | ERR4820184 | HR-TB | lineage3 | gb | ERR4820614 | Other | lineage3.1.2 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR4815905 | Other | lineage1.2.2.2 | gb | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4819699 | HR-TB | lineage4.6.2.2 | gb | SRR3675261 | Other | lineage1.2.1.1 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4819765 | Other | lineage4.1 | None | ERR4819082 | Other | lineage1.1.2 | gb | SRR6982178 | Sensitive | lineage2.2.1 | None | ERR4821812 | Sensitive | lineage4.8 | gb | SRR6982471 | Sensitive | lineage2.2.1 | None | ERR4819414 | Sensitive | lineage1.1.3.1 | gb | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | ERR2652981 | Sensitive | lineage4.1.2.1 | None | ERR2512884 | Sensitive | lineage4.6.2.2 | gb | SRR7068875 | Other | lineage3.1.2.2 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR4818104 | Sensitive | lineage4.1.2 | gb | ERR978755 | RR-TB | lineage4.8 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | ERR4818556 | Sensitive | lineage3 | None | ERR4820194 | Sensitive | La3 | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4822085 | Other | lineage4.8 | gb | ERR4816549 | Other | lineage2.2.1 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070223 | HR-TB | lineage3 | None | SRR5818414 | Other | lineage4.9 | None | ERR9787167 | Sensitive | lineage6.3.1 | None | ERR4821176 | Other | lineage2.2.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR11294512 | Other | La1.8.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR4818753 | Sensitive | lineage3 | gb | ERR4818936 | Sensitive | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | SRR6046815 | Other | lineage3 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR2513657 | Sensitive | lineage1.2.2.2 | gb | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | ERR4819181 | Sensitive | lineage3 | gb | ERR4816462 | Other | lineage4.1.2.1 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR4819518 | Sensitive | lineage4.1.1.1 | None | ERR4816476 | Other | lineage3.1.2.1 | None | SRR3675214 | Other | lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR019855 | Other | lineage3 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR10796586 | Other | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR4819456 | Other | lineage4.8 | None | ERR4821917 | Sensitive | lineage1.1.3.2 | gb | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR4818530 | Sensitive | lineage2.2.1 | gb | ERR4814415 | Other | lineage3.1.1 | None | ERR2513619 | Sensitive | lineage4.8 | gb | ERR4815427 | HR-TB | lineage3.1 | gb | ERR4820266 | Sensitive | lineage3 | None | ERR4815923 | Sensitive | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR2513259 | Other | lineage3 | None | ERR867575 | Other | lineage4.9 | None | SRR12882768 | RR-TB | lineage3.1.1 | None | ERR4818050 | Sensitive | lineage4.6.2.2 | None | ERR2516375 | MDR-TB | lineage4.3.3 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | ERR4815898 | Other | lineage3 | None | ERR4818259 | RR-TB | lineage4.1.1.1 | None | ERR4818287 | RR-TB | lineage4.5 | gb | SRR6982070 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR2512986 | Other | lineage3 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR4815613 | Other | lineage3 | None | ERR4815901 | Other | lineage2.2.2 | None | ERR978762 | Other | lineage4.8 | None | SRR18002976 | Other | lineage2.2.1 | None | ERR6397161 | Other | lineage4.2.2.2 | None | SRR5818399 | Sensitive | lineage4.9 | None | ERR4817134 | HR-TB | lineage2.2.1 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4818126 | Other | lineage1.2.2 | None | ERR4820328 | Other | lineage3 | gb | ERR4815425 | Other | lineage4.5 | gb | ERR4819533 | Other | lineage1.1.2 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | ERR4820723 | Other | lineage4.4.1.1 | None | ERR245801 | Other | lineage4.3.4.2.1 | None | ERR4819368 | Sensitive | lineage4.8 | gb | ERR4769518 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR2179816 | Sensitive | lineage4 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4816667 | Other | lineage2.2.2 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR4816283 | Other | lineage4.1.2.1 | None | ERR4816425 | Other | lineage2.2.2 | None | ERR2514834 | Sensitive | lineage4.7 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR11342689 | Other | lineage4.1.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR7236134 | Other | La1.8.1 | None | ERR867572 | Other | lineage4.9 | None | SAMEA3450033 | Other | lineage4.8 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR7070329 | Other | lineage3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR2514645 | Sensitive | lineage4.3.4.1 | None | SRR3675509 | Other | lineage4.9 | None | SRR7069669 | Other | lineage3.1.1 | None | ERR4820030 | Other | lineage4.9 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | SRR18911555 | Other | lineage4.1.2.1 | None | SRR7069137 | Other | lineage4.8 | None | SRR12199472 | Sensitive | lineage1.1 | None | ERR4818787 | Other | lineage6.1.2 | None | ERR10796582 | Other | lineage4.3.4.1 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | ERR4818355 | Other | lineage3 | None | ERR4815909 | Other | lineage4.8 | None | ERR4815268 | Sensitive | lineage4.8 | None | ERR4816133 | Other | La1.8.2 | None | ERR4818176 | Other | lineage4.1.2.1 | None | ERR4820777 | Sensitive | lineage4.1.2.1 | None | ERR4821154 | Sensitive | lineage2.2.1 | gb | ERR2229733 | Other | lineage4.8 | dk | ERR4816818 | Other | lineage4.8.2 | None | ERR4821286 | Other | lineage4.8 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18213736 | Other | lineage3 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | ERR4816690 | Other | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR4820324 | Other | lineage4 | None | ERR4821409 | Other | lineage4.8 | None | ERR4820026 | Other | lineage3 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR4820151 | Other | lineage4.8 | None | SRR7069033 | Sensitive | lineage4.2.1 | None | SRR7240147 | Other | La1.8.1 | None | ERR2512698 | Sensitive | lineage1.1.3.1 | gb | ERR2514926 | Other | lineage4.6.2.2 | gb | SRR21714038 | Sensitive | lineage4.3.3 | None | ERR4815777 | Other | lineage4.9 | None | SRR5007165 | Other | lineage3 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | SRR1792232 | Other | La1.7.1 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR10796562 | Other | lineage4.3.4.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | ERR2513450 | Other | lineage1.2.1.2.1 | gb | SRR10993951 | RR-TB | La1.6 | None | ERR978761 | Other | lineage4.8 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR2228910 | Other | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR4817703 | Other | lineage1.1.1.1 | None | SRR7236369 | Other | La1.8.1 | None | ERR4819772 | Other | lineage1.1.3.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR2513401 | HR-TB | lineage3 | None | ERR1034765 | HR-TB | lineage4.3.3 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR2515055 | Sensitive | lineage3 | None | ERR502474 | RR-TB | lineage4.9 | None | ERR4817874 | Other | lineage3 | None | ERR4816300 | Sensitive | lineage4.1.2.1 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR6046852 | MDR-TB | lineage3 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR4816243 | Sensitive | lineage3 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR978756 | Other | lineage4.8 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR5818394 | Other | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | ERR181864 | Sensitive | lineage3.1.1 | None | ERR4815994 | Sensitive | lineage3 | gb | SRR7069954 | Other | lineage1.2.2.2 | None | ERR2513508 | Sensitive | lineage3 | gb | SRR7070461 | Other | lineage3 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR7131123 | Other | lineage4.8 | None | ERR4814986 | Other | lineage4.3.4.2 | None | SRR20969722 | HR-TB | lineage4.4.2 | None | ERR3806588 | Other | lineage6.1.3 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR3675491 | Other | lineage4.7 | None | SRR5341288 | Pre-XDR-TB | lineage3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4817834 | Sensitive | lineage1.1.2 | gb | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR2513681 | Other | lineage1.1.2 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR4816782 | Other | lineage4.1.2.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR1181161 | Other | lineage4.9 | None | ERR1873555 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4828879 | HR-TB | lineage3 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR10315579 | Other | lineage2.2.1.1 | None | ERR2514550 | MDR-TB | lineage3 | gb | ERR4818726 | Other | lineage4.1.2.1 | None | ERR751569 | MDR-TB | lineage4.3.3 | None | ERR4814952 | Sensitive | lineage3 | None | ERR212047 | Sensitive | lineage4.8 | mw | ERR9907785 | RR-TB | lineage4.3.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4828962 | Sensitive | lineage4.1.4 | it | SRR19304094 | Other | lineage6.1.2 | None | SRR5341430 | Other | lineage3 | None | ERR4815034 | Sensitive | lineage4.1.2.1 | gb | ERR4818538 | Sensitive | lineage3 | gb | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4817047 | Sensitive | lineage4.2.2.1 | gb | SRR5818386 | Other | lineage4.9 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR7070293 | Other | lineage4.8 | None | ERR4817464 | Sensitive | lineage3.1.1 | None | ERR4817555 | Sensitive | lineage3 | None | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | ERR4817131 | Other | lineage3.1.3;lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR4820107 | Other | lineage1.2.1.2.1 | None | SRR7069128 | Other | lineage1.2.1.2.1 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR2512606 | HR-TB | lineage3 | None | ERR2513231 | Sensitive | lineage4.3.4.2 | None | SRR7069193 | Other | lineage4.3.1.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6046246 | Other | lineage3 | None | SRR5007155 | Sensitive | lineage4.1.2.1 | None | SRR18002945 | Other | lineage2.2.1 | None | ERR10796595 | Other | lineage4.9 | None | ERR978760 | RR-TB | lineage4.8 | None | SRR10993957 | Other | La1.6 | None | ERR4817435 | Other | lineage1.1.3.1 | None | ERR4814714 | Other | lineage3 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818462 | Other | lineage4.9 | None | ERR4821334 | Other | lineage4.1.3 | None | SRR6397362 | Sensitive | lineage4.4.2 | ca | ERR4820941 | HR-TB | lineage3 | gb | SRR5818464 | Other | lineage4.9 | None | ERR4820478 | Sensitive | lineage3.1.3 | None | ERR9117788 | Other | lineage3 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR7069319 | Other | lineage4.5 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR2229366 | Other | lineage4.8 | None | ERR4815394 | Sensitive | lineage4.2.1 | None | SRR6046064 | Other | lineage3 | gb | ERR4819528 | RR-TB | lineage3 | None | ERR4817189 | Other | lineage4.7 | None | ERR4819641 | Other | lineage4.6.2.2 | None | ERR4820188 | Other | lineage3 | gb | ERR4817803 | Other | lineage4.2.2.2 | None | ERR867544 | Other | lineage4.9 | None | ERR978727 | Other | lineage4.8 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4815811 | Other | lineage4.2.1.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817398 | Other | lineage3.1.1 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | ERR978751 | Other | lineage4.8 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4818825 | HR-TB | lineage4.1.2.1 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | ERR4821523 | Pre-XDR-TB | lineage2.2.1 | gb | ERR4821530 | Other | lineage4.3.4.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR1173170 | Other | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR2514655 | Sensitive | lineage3 | None | SRR6044936 | Other | lineage4.6 | None | ERR2514173 | Other | lineage4.5 | gb | ERR2514801 | Other | lineage1.1.3.2 | gb | SRR6045424 | Other | lineage1.1.2 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6397428 | Sensitive | lineage4.4.2 | ca | ERR2660536 | Sensitive | lineage2.2.1 | None | SRR22048536 | Other | lineage4.3.3 | None | ERR1082121 | Sensitive | lineage4.9;lineage5.1.1 | None | ERR978733 | RR-TB | lineage4.8 | None | ERR4820968 | Sensitive | lineage4.1.2.1 | gb | SRR9971088 | RR-TB | lineage2.2.1 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | ERR4822104 | Other | lineage3;lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR7069931 | Other | lineage4.2.2.2 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4814362 | Other | lineage4.8 | None | ERR4818489 | Other | lineage1.1.3.1 | None | SRR6982139 | Sensitive | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR7070315 | Other | lineage4.8 | None | ERR2229436 | Other | lineage4.8 | None | SRR3675565 | Other | lineage4 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR978726 | RR-TB | lineage4.8 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | ERR4815053 | Other | lineage4.1.2.1 | gb | ERR4817895 | Other | lineage4.1.2.1 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4819872 | HR-TB | lineage4.4.1.1 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR7069800 | Other | lineage3.1.2.1 | None | ERR4819307 | Other | lineage4.3.2 | None | SRR3675552 | Other | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | ERR4822021 | Other | lineage4.8 | gb | SRR6046117 | Other | lineage4.9 | None | SRR6982014 | Sensitive | lineage4.1.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR7070320 | Other | lineage4.8 | None | SRR7236374 | Other | La1.8.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4830479 | RR-TB | lineage1.2.2.1 | None | SRR5818432 | MDR-TB | lineage4.9 | None | ERR4818948 | Sensitive | lineage4.3.3 | gb | ERR978752 | Other | lineage4.8 | None | SRR6044983 | Other | lineage3.1.1 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4814524 | Sensitive | lineage4.1.1.1 | gb | ERR4820270 | MDR-TB | lineage4.8 | gb | ERR4820959 | Other | lineage4.1.2.1 | None | SRR6046818 | Other | lineage4.2.1 | gb | ERR1203078 | Sensitive | lineage4.6.2.2 | None | ERR4820736 | Sensitive | lineage4.1.2.1 | gb | ERR4821310 | Other | lineage5 | None | ERR2660524 | HR-TB | lineage1.1.3.2 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR5818460 | Other | lineage4.9 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR2228838 | Other | lineage4.8 | None | ERR867567 | RR-TB | lineage3 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR176771 | Sensitive | lineage4.3.4.2.1 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR245810 | Sensitive | lineage4.9.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR3675291 | Sensitive | lineage4.6 | gb | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | ERR978748 | Other | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR6981962 | Sensitive | lineage4.3.2.1 | None | ERR4814874 | Sensitive | lineage1.1.2 | None | SRR7240148 | Other | La1.8.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR4814356 | Other | lineage3.1.2 | None | ERR4816604 | Sensitive | lineage4.1.2 | None | SRR5341460 | Other | lineage3 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4816967 | Other | lineage5 | None | ERR978693 | Other | lineage4.8 | None | ERR4817569 | Other | lineage4.3.4.1 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR4819522 | Other | lineage4.2.1 | gb | ERR2229204 | Other | lineage4.8 | None | ERR4815917 | Other | lineage2.2.1 | gb | ERR2512423 | Other | lineage4.1.1.3 | None | ERR911930 | Other | lineage4.8 | None | SRR19303876 | Other | lineage4.7 | None | SRR7070479 | Other | lineage4.1.2 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR6044841 | Other | lineage4.9 | None | SRR10869203 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045125 | Other | lineage1.1.2 | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | ERR4822004 | Other | lineage1.1.1.1 | gb | SRR6045496 | Other | lineage6.1.3 | None | ERR4821127 | HR-TB | lineage4.6.2.2 | gb | SRR1181250 | Other | lineage4.9 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR11972283 | MDR-TB | lineage2.2.1 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR2512841 | HR-TB | lineage2.2.1 | gb | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818988 | Other | lineage1.2.2 | None | ERR4820334 | Other | lineage4.4.1.1 | gb | ERR5864323 | MDR-TB | lineage4.2.1 | None | ERR439982 | Sensitive | lineage5 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR2228899 | Other | lineage4.8 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4817175 | Other | lineage4.8 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | ERR1023509 | Other | lineage4.9 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | ERR2228900 | Other | lineage4.8 | None | ERR4821746 | Sensitive | lineage4.4.1.1 | gb | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR867566 | Other | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR6044904 | Other | lineage3 | None | SRR6045158 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR4818522 | Other | lineage3 | None | ERR4814748 | Other | lineage4.8 | None | ERR5865119 | MDR-TB | lineage2.2.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | SRR9971144 | RR-TB | lineage2.2.1 | None | SRR11349153 | RR-TB | lineage4.1.1.1 | None | ERR911929 | Other | lineage4.8 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4818785 | Sensitive | lineage4.1.2.1 | None | ERR4816696 | Other | lineage3 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR978746 | RR-TB | lineage4.8 | None | ERR4820397 | Other | lineage4.9 | None | ERR978735 | Other | lineage4.8 | None | ERR4818691 | Other | lineage4.8 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR1203071 | Sensitive | lineage4.8 | None | SRR10993953 | Other | La1.6 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4817941 | Other | lineage4.8 | gb | ERR4818128 | Other | lineage4.1.2.1 | None | ERR4818671 | Other | lineage4.8 | gb | ERR2513924 | Sensitive | lineage4.8 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR3324354 | Sensitive | lineage4.8 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | ERR4821488 | Sensitive | lineage4.1.3 | None | ERR2509886 | Other | lineage3 | None | ERR4821773 | Other | La1.6 | None | SRR18002908 | Other | lineage2.2.1 | None | ERR10796598 | Other | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | ERR4821054 | Sensitive | lineage3 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | ERR4817917 | Other | lineage2.2.1 | None | ERR4816882 | Sensitive | lineage4.8 | None | SRR1238557 | Other | lineage4.9 | None | SRR8600288 | Other | La1.8.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR7070144 | Other | lineage4.8 | None | SRR6045743 | Other | lineage3 | None | SRR6153150 | Other | lineage3.1.1 | None | ERR4821761 | Other | lineage3 | gb | SRR1735598 | RR-TB | lineage4.9 | None | ERR4818763 | Other | lineage3 | gb | SRR18003023 | Other | lineage2.2.1 | None | SRR19241806 | Sensitive | lineage4.1.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR2027253 | Other | lineage6.2.3 | None | SRR6046766 | Other | lineage3.1.1 | None | ERR4817060 | Other | None | ERR10796635 | Other | lineage4.8 | None | ERR2514565 | Sensitive | lineage3.1.2.1 | gb | ERR4815452 | Other | lineage4.3.3 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR5007170 | Other | lineage4.9 | None | ERR017781 | Other | lineage3 | None | ERR4819980 | Sensitive | lineage4.1.2.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | SRR21713567 | Sensitive | lineage4.5 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR1019127 | Other | lineage4.9 | None | ERR4829337 | Sensitive | lineage4.8 | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4769479 | Other | La1.3 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR7070571 | Sensitive | lineage3 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR7069648 | Other | lineage4.6.2.2 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR10796578 | Other | lineage2.2.1 | None | ERR4816183 | Other | lineage3;lineage4.9 | None | SRR6982419 | Other | lineage4.8 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR4821341 | Other | lineage4.3.4.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR18003033 | Other | lineage2.2.1 | None | ERR4819324 | Other | lineage4.8 | gb | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR18003052 | Other | lineage2.2.1.1 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR4817826 | Other | lineage4.5 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4820690 | Sensitive | lineage4.1.1 | gb | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR4819217 | Other | La1.3;lineage1.2.2.2 | None | ERR2512443 | Sensitive | lineage4.8 | gb | ERR4821958 | Other | lineage4.3.3 | gb | ERR4829359 | Sensitive | lineage4.7 | None | ERR2514351 | Sensitive | lineage3 | gb | SRR5818408 | Other | lineage4.9 | None | ERR2515032 | Other | lineage3 | None | ERR4821572 | Sensitive | lineage2.1 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | ERR2516270 | Pre-XDR-TB | lineage2.2.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR4814767 | MDR-TB | lineage2.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR978754 | RR-TB | lineage4.8 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR4769462 | Other | La1.3 | None | ERR4821167 | Sensitive | lineage4.8 | gb | ERR4819491 | Other | lineage4.1.2.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR2027250 | Other | lineage3.1.2 | None | SRR6981948 | Sensitive | lineage4.3.2.1 | None | SRR7070134 | Other | lineage3.1.1 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR11342695 | MDR-TB | lineage4.8 | None | ERR2514692 | Other | None | SRR11349207 | RR-TB | lineage2.2.1 | None | ERR4820161 | Other | lineage3 | None | ERR4821007 | Other | lineage1.2.2.2 | None | ERR867521 | MDR-TB | lineage2.2.1 | None | SRR1173281 | Other | lineage3 | None | SRR6046135 | Sensitive | lineage4.1.2.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR4809049 | Sensitive | lineage4.1.2 | za | SRR2101816 | Other | lineage4.8 | None | ERR4814312 | Other | lineage4 | None | ERR978694 | Other | lineage4.8 | None | ERR4818173 | Other | lineage2.2.1 | None | ERR037234 | Sensitive | lineage4.9 | None | DRR184913 | Sensitive | lineage2.2.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR978747 | Other | lineage4.8 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4814496 | Sensitive | lineage4.1.2 | None | SRR6045705 | Other | lineage4.9 | None | ERR4819140 | Other | lineage4.1.2.1 | None | ERR4817584 | Other | lineage3;lineage4.9 | None | SRR11972323 | Other | lineage1.1.3.2 | None | ERR3804142 | Sensitive | lineage6.3.1 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR4814930 | Other | lineage4.4.1.1 | None | SRR3675527 | Other | lineage4.9 | None | ERR4815104 | Sensitive | lineage4.8 | None | ERR867571 | Other | lineage4.9 | None | ERR4815502 | Other | lineage4.1 | None | DRR034348 | Other | lineage2.2.1 | None | SRR7070515 | Other | lineage1.1.3.1 | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4816756 | Other | lineage2.2.1;lineage4 | None | ERR4817170 | Other | lineage4.1.2.1 | gb | ERR4817977 | Other | lineage4.8 | gb | ERR4818507 | Other | lineage4.1.2.1 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR4819166 | Other | lineage3 | gb | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4816093 | Other | lineage1.1.3 | None | ERR4820891 | Sensitive | lineage4.9 | gb | ERR4822034 | Sensitive | lineage3.1.2.1 | None | ERR867545 | Other | lineage4.9 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | ERR4816429 | Other | lineage1.1.2 | None | ERR4818065 | Other | lineage4.1.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR11342646 | HR-TB | lineage3 | None | ERR4818977 | Other | lineage4.1.2.1 | None | ERR4819615 | Other | lineage4.3.4.2.1 | None | ERR4820746 | Other | lineage3 | None | ERR4820846 | RR-TB | lineage4.6.2.2 | gb | ERR978734 | RR-TB | lineage4.8 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | ERR2514753 | Sensitive | lineage3 | None | ERR9811805 | MDR-TB | lineage4.8 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR212082 | Sensitive | lineage4.9.1 | None |
|---|
