EBG00000313325 - n.1449A>G
Drug resistance types
24 Sensitive
29 RR-TB
26 HR-TB
19 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
149 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 18 |
| lineage3 | 36 |
| lineage4.4.1.1.1 | 1 |
| lineage3.1.3 | 2 |
| lineage4.6.1.1 | 2 |
| lineage4.6.1.2 | 5 |
| lineage4.3.2.1 | 2 |
| lineage6 | 1 |
| lineage1.1.2 | 7 |
| lineage2.2.1 | 30 |
| lineage4.4.1.2 | 3 |
| lineage4.1.2.1 | 23 |
| lineage4.1.2 | 4 |
| lineage4.8 | 40 |
| lineage1.2.2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.6.2.2 | 5 |
| lineage4.1.1.3 | 5 |
| lineage4.6.5 | 2 |
| 5 | |
| lineage4.3.3 | 5 |
| lineage5 | 1 |
| La1.8.2 | 1 |
| lineage4.2.1 | 2 |
| lineage4 | 10 |
| lineage4.3.4.2.1 | 3 |
| lineage2.2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.5 | 1 |
| lineage1.1.1 | 1 |
| lineage3.1.1 | 5 |
| lineage4.8.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.3.2 | 3 |
| lineage1.1.3 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.3.3;lineage3 | 1 |
| lineage1.1.3.1 | 3 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage3.1.2 | 2 |
| lineage4.1 | 1 |
| lineage4.4.1.1 | 6 |
| lineage1.1.3.2 | 1 |
| lineage4.1.3 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.6 | 2 |
| lineage4.1.1 | 2 |
| lineage4.3.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 260 |
Geographic prevalence
Country level data for this variant is available for 66 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR736816 | Other | lineage4.9 | None | ERR5979407 | Other | lineage3 | None | ERR6197038 | HR-TB | lineage4.9 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | ERR9117781 | Other | lineage3.1.3 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1173833 | Other | lineage4.9 | None | SRR19304094 | Other | lineage6 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR12882277 | Sensitive | lineage1.1.2 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR15316461 | Sensitive | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR19241806 | Sensitive | lineage4.1.2.1 | None | SRR2100877 | HR-TB | lineage4.1.2 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4815104 | Other | lineage4.8 | None | SRR1723745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4815777 | Other | lineage4.9 | None | ERR4814399 | Other | lineage4.6.2.2 | gb | ERR4815627 | Other | lineage4.1.1.3 | gb | ERR4815268 | Other | lineage4.8 | None | ERR4815472 | Other | lineage4.9 | gb | ERR4815457 | Other | lineage4.1.2.1 | None | SRR3675219 | Other | lineage4.9 | None | ERR4814767 | MDR-TB | lineage2.2.1 | None | ERR4814699 | HR-TB | lineage4.1.2.1 | gb | ERR4814745 | Other | lineage4.6.5 | None | SRR3675282 | Other | None | ERR4814764 | HR-TB | lineage3 | gb | SRR3675252 | RR-TB | lineage1.1.2 | None | ERR4814911 | Other | lineage4.3.3 | None | SRR3675288 | Other | lineage3 | None | ERR4814952 | Sensitive | lineage3 | None | ERR2229810 | Other | lineage4.8 | None | ERR2229541 | Other | lineage4.8 | None | ERR4814976 | Other | lineage4.9 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR2228965 | Other | lineage4.8 | None | ERR4815898 | Other | lineage3 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR4815917 | Other | lineage2.2.1 | gb | ERR4815909 | Other | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4815944 | HR-TB | lineage4.1.2.1 | None | ERR4816183 | Other | None | ERR4816969 | Other | lineage4.8 | None | ERR4816133 | Other | La1.8.2 | None | ERR4815957 | HR-TB | lineage4.2.1 | None | ERR4816982 | Other | lineage4 | None | ERR4816373 | Other | lineage4.1.2 | gb | ERR4816243 | Sensitive | lineage3 | None | ERR2229147 | Other | lineage4.8 | None | ERR4816227 | RR-TB | lineage3 | None | ERR4816510 | Other | lineage4.1.2.1 | None | ERR4816397 | Other | lineage1.1.2 | None | ERR4816437 | Other | lineage3 | gb | ERR4816450 | Sensitive | lineage4.1.1.3 | gb | ERR4817488 | Other | lineage4.3.4.2.1 | None | ERR4816650 | Sensitive | lineage4.1.2.1 | None | ERR2229204 | Other | lineage4.8 | None | ERR4816627 | Other | lineage2.2 | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4816561 | Sensitive | lineage3 | gb | ERR4816726 | Sensitive | lineage1.1.2 | gb | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816696 | Other | lineage3 | None | ERR4816725 | Other | lineage4.8 | gb | ERR2228815 | RR-TB | lineage4.8 | None | ERR2229435 | HR-TB | lineage4.8 | None | ERR2229436 | Other | lineage4.8 | None | ERR2229801 | Other | lineage4 | None | ERR2228810 | RR-TB | lineage4 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | ERR2229804 | Other | lineage4 | None | ERR2228838 | RR-TB | lineage4.8 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR2228890 | Other | lineage4 | None | ERR4818691 | Other | lineage4.8 | None | ERR4815816 | Other | lineage4.5 | gb | ERR4817703 | Other | lineage1.1.1 | None | ERR4818663 | Other | lineage3 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR4817665 | Other | lineage4.8 | None | ERR2245392 | Sensitive | lineage3.1.1 | no | SAMEA3450033 | Other | lineage4.8 | None | ERR4817799 | Other | lineage3 | None | ERR4817853 | Other | lineage4.8.1 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4817874 | Other | lineage3 | None | ERR2510790 | Other | lineage4.6.2.2 | None | ERR2512443 | Other | lineage4.8 | gb | ERR4818763 | Other | lineage3 | gb | ERR2513149 | Other | lineage2.2.1.2 | gb | ERR2512423 | Other | lineage4.1.1.3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2515055 | Other | lineage3 | None | SRR2024915 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2512497 | Other | lineage4.6.2.2 | gb | ERR2513462 | Sensitive | lineage3.1.3 | gb | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR4818393 | RR-TB | lineage3 | None | ERR2513243 | Other | lineage3 | gb | ERR2512689 | Other | lineage4.3.3 | gb | ERR2512704 | Other | lineage4.3.2 | gb | ERR4818556 | Other | lineage3 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR4818489 | Other | lineage1.1.3 | None | ERR4818498 | Other | lineage3.1.2.1 | gb | ERR2509886 | RR-TB | lineage3 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR2513699 | Other | lineage4.1.2 | gb | ERR4817584 | MDR-TB | lineage3 | None | ERR4818629 | Other | lineage4.3.3;lineage3 | gb | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR5818458 | Other | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4820275 | HR-TB | lineage4.4.1.2 | gb | ERR4819313 | Other | lineage3.1.1 | None | ERR4819348 | Sensitive | lineage4.1.2.1 | gb | SRR2024880 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4820328 | Other | lineage3 | gb | ERR4820742 | Other | lineage4.3.4.2.1 | None | ERR4819456 | Other | lineage4.8 | None | SRR2024916 | MDR-TB | lineage2.2.1 | cn | ERR4819414 | Other | lineage1.1.3.1 | gb | ERR4819515 | HR-TB | lineage4.2.1 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4819561 | Sensitive | lineage4.1.2.1 | gb | ERR2514279 | Other | lineage3 | gb | ERR2514295 | HR-TB | lineage3 | gb | ERR2514305 | Other | lineage3 | None | ERR4820404 | Other | lineage4.3.2 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR2514389 | Other | lineage3 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR2514488 | Sensitive | lineage4.8 | gb | ERR2514550 | MDR-TB | lineage3 | gb | ERR2514521 | Sensitive | lineage4.8 | gb | ERR4820787 | Other | lineage3.1.1 | gb | ERR4819765 | Other | lineage4.1 | None | ERR2514565 | Other | lineage3.1.2.1 | gb | ERR4819872 | HR-TB | lineage4.4.1.1 | None | ERR2514692 | Other | None | ERR4819830 | Other | lineage2.2.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR4820817 | Other | lineage4.1.2.1 | None | ERR2514949 | Sensitive | lineage3 | gb | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4820614 | Other | lineage3.1.2 | None | ERR2515026 | Sensitive | lineage4.3.2 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820833 | HR-TB | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4820047 | HR-TB | lineage4.8 | gb | ERR4821791 | HR-TB | lineage4.1.2.1 | None | ERR2515062 | Other | lineage2.2.1.2 | gb | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820907 | Other | lineage4.1.2.1 | gb | ERR4821775 | Other | lineage4 | None | ERR4821789 | Sensitive | lineage1.1.2 | None | ERR4821054 | Other | lineage3 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4822104 | RR-TB | lineage3 | None | ERR4821167 | Other | lineage4.8 | gb | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821263 | Other | lineage4.1.3 | gb | ERR4821331 | HR-TB | lineage4.8 | None | ERR270777 | HR-TB | lineage4.1.2 | None | ERR4821915 | RR-TB | lineage4.9 | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4822021 | Other | lineage4.8 | gb | ERR4821360 | Other | lineage4.1.2.1 | None | SRR6045655 | Other | lineage4.1.1.3.1 | None | ERR4821563 | HR-TB | lineage1.1.2 | gb | ERR4821564 | Sensitive | lineage4.2.2.2 | None | ERR4821736 | HR-TB | lineage2.2.1 | gb | SRR6045849 | Other | lineage4.4.1.1 | None | SRR5818665 | Other | lineage4.6.5 | dj | SRR6045125 | Other | lineage1.1.2 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046020 | Other | lineage3 | None | ERR4829232 | Other | lineage1.1.3.1 | None | SRR6046246 | Other | lineage3 | None | ERR4829208 | RR-TB | lineage4.8 | None | ERR4828879 | MDR-TB | lineage3 | None | ERR4828805 | Other | lineage4.6 | None | ERR4829328 | Other | lineage2.2.1 | None | ERR4828811 | Other | lineage4.1.1 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR4829770 | HR-TB | lineage4.3.1 | None | ERR4829835 | HR-TB | lineage4.8 | it | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046641 | Other | lineage4.8 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046679 | Other | lineage3 | gb | SRR6046864 | Other | lineage3 | gb | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6046907 | Other | lineage4.9 | None | SRR6367397 | Other | lineage4.1.2.1 | None | SRR6152980 | HR-TB | lineage4.8 | ca | SRR6896379 | Other | lineage4.9 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR671837 | MDR-TB | lineage2.2.1 | cn | SRR6785282 | Other | lineage4.3.3 | None | SRR6824637 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824595 | Pre-XDR-TB | lineage2.2.1 | cn | SRR8649119 | Other | lineage4.6 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | SRR7131132 | Other | lineage1.1.3.1 | None | SRR8651600 | Pre-XDR-TB | lineage2.2.1 | cn | ERR017781 | Other | lineage3 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | DRR034348 | Other | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR037504 | Other | lineage4.9.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796615 | Other | lineage4 | None | ERR4811291 | Pre-XDR-TB | lineage2.2.1 | cn | ERR3283008 | Other | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4810486 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810792 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810963 | MDR-TB | lineage2.2.1 | cn | ERR10796623 | Other | lineage4.1.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None |
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