lineage | Count |
---|---|
La1.7.1 | 1 |
lineage4.2.1 | 6 |
lineage4.4.1.1 | 22 |
lineage2.2.1 | 109 |
lineage2.2.1.1 | 10 |
lineage4.8 | 95 |
lineage2.2.2 | 6 |
lineage4.9 | 46 |
lineage4.2.2.1 | 3 |
lineage4.1.2.1 | 108 |
lineage2.2.2;lineage2.2.1 | 1 |
lineage4.4.2 | 4 |
lineage4.5 | 12 |
lineage4.1.1.3.1 | 4 |
lineage4.3.3 | 38 |
lineage3.1.2 | 9 |
lineage3 | 98 |
lineage4.6.2.2 | 20 |
lineage6 | 2 |
lineage4 | 24 |
lineage1.2.1.2.1 | 6 |
lineage6.1.1 | 4 |
lineage4.2.2.2 | 15 |
lineage2.2 | 2 |
lineage1.2.2.2 | 8 |
lineage1.1.2 | 23 |
lineage4.1.1 | 15 |
lineage1.2.2 | 2 |
lineage4.3.4.2.1 | 5 |
lineage4.7 | 20 |
lineage3.1.1 | 20 |
lineage4.1.1.3 | 18 |
lineage4.1.2 | 14 |
lineage4.4 | 1 |
lineage4.1 | 7 |
lineage1.1.1 | 4 |
lineage4.3.4.2 | 17 |
lineage4.1.1.1 | 2 |
23 | |
lineage1.1.3.2 | 5 |
lineage1.1.3.1 | 9 |
lineage1.2.1.1 | 1 |
lineage1.1.3 | 5 |
lineage4.3.4.1 | 14 |
lineage4.3.2 | 8 |
lineage4.3.2.1 | 12 |
La1.8.1 | 2 |
lineage5 | 2 |
lineage5.1.2 | 1 |
lineage4.8;lineage4.2.1.1 | 1 |
La1.8.2 | 1 |
lineage3.1 | 2 |
lineage4.1.3 | 5 |
lineage4.4.1.1.1 | 15 |
lineage4.6.1.2 | 1 |
lineage4.6.3 | 2 |
lineage3.1.2.1 | 6 |
lineage4.6 | 4 |
La3 | 6 |
lineage4.2.2 | 3 |
lineage4.8.2 | 6 |
lineage4;lineage1.1.2 | 1 |
lineage4.8.1 | 4 |
lineage4;lineage3 | 1 |
lineage4.6.1 | 1 |
lineage1.2.2.1 | 2 |
lineage1.1.3.3 | 2 |
lineage4.1.1.2 | 2 |
lineage4;lineage1.1 | 1 |
lineage4;lineage3.1.2.1 | 1 |
lineage4.1.4 | 4 |
lineage4.9;lineage4.8 | 1 |
lineage4.3.1.1 | 7 |
lineage4.6.1.1 | 2 |
lineage6.1.3 | 1 |
lineage5.1.4 | 2 |
lineage2.1 | 1 |
La1.6 | 1 |
lineage3.1.3 | 1 |
lineage4.1.2.1;lineage2.2.1 | 2 |
lineage4.2.2.2;lineage3 | 2 |
lineage4.2 | 1 |
lineage3.1.2.2 | 3 |
lineage4.9;lineage3 | 1 |
lineage1.1.1.1 | 1 |
lineage4.3 | 3 |
lineage6.3.1 | 1 |
La1.2.BCG | 1 |
lineage4.9;lineage1.1 | 1 |
lineage4.9;lineage4.3.4 | 1 |
lineage4.3.4 | 1 |
lineage6.3.2 | 1 |
lineage4.7;lineage4.3.4.2 | 1 |
lineage4.8;lineage4.4.1.1.1 | 1 |
lineage4.9;lineage2.2 | 1 |
spoligotype | Count |
---|---|
None | 992 |
ID | Drug resistance | Lineage | Country iso2 | SRR13986566 | Other | La1.7.1 | None | SRR14782113 | Pre-XDR-TB | lineage4.2.1 | None | SRR14164829 | HR-TB | lineage4.4.1.1 | None | SRR14802215 | MDR-TB | lineage2.2.1 | None | SRR15316102 | Other | lineage2.2.1.1 | None | SRR14802219 | Other | lineage4.8 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR16149182 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR1735591 | Other | lineage4.1.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002902 | Other | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002997 | Other | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18213684 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18213675 | Other | lineage4.8 | None | SRR18003011 | Other | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR18213727 | Sensitive | lineage4.3.3 | None | SRR18213691 | Other | lineage4.8 | None | SRR18213721 | Other | lineage4.8 | None | SRR18213800 | Other | lineage3.1.2 | None | SRR18213726 | Other | lineage3 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR19303808 | Sensitive | lineage4.1.2.1 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303819 | Other | lineage4.6.2.2 | None | SRR19303907 | Other | lineage4.8 | None | SRR19304035 | Other | lineage4.1.2.1 | None | SRR19303985 | Other | lineage4.8 | None | SRR19304094 | Other | lineage6 | None | SRR20969923 | Other | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR19304095 | Other | lineage4.1.2.1 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR21240202 | HR-TB | lineage4.4.1.1 | None | SRR20969951 | Other | lineage4.4.2 | None | SRR21239878 | HR-TB | lineage4.4.1.1 | None | SRR21240010 | Other | lineage4.3.3 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | SRR21595944 | Other | lineage2.2.1 | None | SRR21658552 | Other | lineage6.1.1 | None | SRR21713567 | Sensitive | lineage4.5 | None | SRR22048352 | Sensitive | lineage4.2.2.2 | None | SRR25340845 | Sensitive | lineage3 | None | SRR22424893 | HR-TB | lineage3.1.2 | None | ERR4815165 | Other | lineage4.1.2.1 | None | ERR4815118 | Other | lineage2.2 | None | SRR25340826 | Sensitive | lineage3 | None | ERR4815104 | Other | lineage4.8 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | ERR4815172 | Other | lineage1.2.2.2 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | SRR3675474 | Other | lineage4.1.1 | None | ERR4815197 | Other | lineage4 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815265 | Other | lineage2.2.1 | None | ERR4815613 | Other | lineage3 | None | ERR4815228 | Other | lineage4.4.1.1 | None | ERR4815268 | Other | lineage4.8 | None | ERR4815625 | Other | lineage4.1.2.1 | None | ERR4815636 | Other | lineage4.1.2.1 | None | SRR3085299 | Pre-XDR-TB | lineage4 | None | ERR4815278 | Other | lineage4.8 | None | ERR4815281 | Other | lineage4.4.2 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | SRR3086370 | Pre-XDR-TB | lineage4 | None | ERR4814296 | Other | lineage4.8 | None | ERR4814312 | Other | lineage4 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4814329 | Other | lineage4.1.2.1 | None | ERR4814326 | Other | lineage4.1.2.1 | None | ERR4814362 | Other | lineage4.8 | None | ERR4814341 | Other | lineage4.7 | None | SRR3675491 | Other | lineage4.7 | None | ERR4815777 | Other | lineage4.9 | None | SRR6045432 | Sensitive | lineage3 | gb | ERR4815649 | HR-TB | lineage4.6.2.2 | None | ERR4815334 | Other | lineage3.1.1 | None | ERR4815336 | Other | lineage4.6.2.2 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR4815655 | Other | lineage4.1.2 | None | SRR6044963 | Other | lineage3 | gb | ERR4814415 | Other | lineage3.1.1 | None | ERR4815338 | Other | lineage4.8 | None | ERR4814430 | Other | lineage4.1.2.1 | None | SRR6045465 | Sensitive | lineage4.4 | gb | ERR4814470 | Other | lineage3.1.1 | None | ERR4814442 | Other | lineage4.4.1.1 | None | ERR4814501 | Other | lineage4.2.2.2 | None | ERR4814472 | Other | lineage4.1 | None | ERR4814485 | Other | lineage4.8 | None | ERR4815396 | Sensitive | lineage4 | None | ERR4814512 | Other | lineage2.2.1 | None | ERR4815400 | Other | lineage1.1.1 | None | ERR4815779 | Other | lineage4.3.4.2 | None | ERR4815689 | Other | lineage3 | None | SRR6045920 | Sensitive | lineage4.1.1.1 | gb | ERR4815414 | Other | None | ERR4815698 | RR-TB | lineage4.7 | None | ERR4814573 | Other | lineage1.1.3.2 | None | ERR1665403 | MDR-TB | lineage2.2.1 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4814596 | Other | lineage4.8 | None | ERR4815440 | Sensitive | lineage4.9 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR4814690 | Sensitive | lineage2.2.1 | None | SAMN02053762 | MDR-TB | lineage4.1.1.1 | None | ERR4814714 | Other | lineage3 | None | ERR4815467 | Other | lineage3 | None | ERR4815713 | Other | lineage4.1.2.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR1750889 | Other | lineage4.4.1.1 | None | ERR4814748 | Other | lineage4.8 | None | ERR1750901 | Sensitive | lineage4.7 | None | ERR1750908 | Sensitive | lineage4 | None | ERR4815490 | Other | lineage3 | None | ERR4814767 | MDR-TB | lineage2.2.1 | None | ERR4815787 | Other | lineage2.2.1 | None | ERR4814775 | Other | lineage1.1.2 | None | ERR4814808 | Other | lineage3 | None | ERR4814782 | HR-TB | lineage2.2.1 | None | ERR4814783 | Other | lineage4.7 | None | ERR4814790 | Other | lineage4.2.1 | None | ERR4814815 | Other | lineage4.2.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4814821 | Other | lineage2.2.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4815499 | Other | lineage4.3.4.2 | None | ERR4814843 | Other | lineage1.1.3 | None | ERR4814824 | Other | lineage3 | None | ERR4814841 | Other | lineage4.1 | None | ERR4815729 | Other | lineage4.1.2.1 | None | ERR4815534 | Other | lineage4 | None | ERR4815730 | Sensitive | lineage4.8 | None | ERR4815800 | Other | lineage4.8 | None | ERR4815528 | Other | lineage4.8 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SRR3675282 | Other | None | ERR4814886 | Other | lineage4.1.2 | None | ERR4815520 | Other | lineage4.8 | None | ERR4815792 | Other | lineage4.1.2.1 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4814912 | HR-TB | lineage4.3.4.1 | None | SRR3675287 | Other | lineage3 | None | ERR4814923 | Other | lineage4.3.2 | None | ERR4814932 | Other | lineage4.1.1 | None | SRR3675288 | Other | lineage3 | None | SRR6280197 | Other | lineage2.2.1 | None | ERR4814938 | Other | lineage4.3.2.1 | None | ERR4814930 | Other | lineage4.4.1.1 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4814986 | Other | lineage4.3.4.2 | None | ERR4815005 | Other | lineage4.1.2.1 | None | ERR4815060 | Other | lineage3 | None | SRR3675452 | Other | lineage3 | None | ERR4815054 | Sensitive | lineage4.8 | None | ERR4815574 | Sensitive | lineage3 | None | ERR4815832 | Other | lineage3 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR2446456 | HR-TB | lineage4.4.1.1 | None | ERR4815849 | Other | lineage3.1.1 | None | ERR4816962 | Other | lineage3 | None | ERR192096 | Other | La1.8.1 | None | ERR4816954 | Other | lineage4.1.2.1 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4815901 | Other | lineage2.2 | None | ERR4815909 | Other | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4815898 | Other | lineage3 | None | ERR4815919 | Other | lineage4.8 | None | ERR4815907 | Other | lineage4.1.2.1 | None | ERR4815920 | Other | lineage3 | None | ERR4816971 | HR-TB | lineage4.3.4.1 | None | ERR4816969 | Other | lineage4.8 | None | ERR4815956 | Other | lineage1.1.2 | None | ERR4816982 | Other | lineage4 | None | ERR4815984 | Other | lineage4.3.2 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4815985 | Other | lineage5.1.2 | None | ERR4816015 | HR-TB | lineage4.4.1.1 | None | ERR4816074 | Other | lineage1.2.2.2 | None | ERR4816029 | Other | lineage2.2.1 | None | ERR2027232 | Other | lineage4.3.4.2 | None | ERR4816051 | MDR-TB | lineage2.2.1 | None | ERR2027252 | Other | lineage4.8;lineage4.2.1.1 | None | ERR4816087 | Other | lineage4.1.2.1 | None | ERR2027218 | Other | lineage4.6.2.2 | None | ERR4816093 | Other | lineage1.1.3 | None | ERR4817017 | Sensitive | lineage4.9 | None | ERR4816101 | Other | lineage4.1.2.1 | None | SRR3675547 | Other | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR2027256 | Other | lineage4.1.2 | None | ERR2027262 | Sensitive | lineage4.1.2.1 | None | ERR4816133 | Other | La1.8.2 | None | ERR4817015 | MDR-TB | lineage4.2.2.1 | None | ERR4817353 | Other | lineage4.1.2.1 | None | ERR4816177 | Other | lineage4.1.2.1 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR2027293 | Other | lineage4.3.4.2 | None | ERR4817479 | Other | lineage4.1.3 | None | ERR4816183 | Other | None | ERR4817046 | Other | lineage3 | None | ERR4817044 | Other | lineage4.1.1 | None | ERR4816227 | RR-TB | lineage3 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4817478 | Other | lineage3 | None | ERR4816235 | Sensitive | lineage4.7 | None | SAMN02585988 | MDR-TB | lineage4.4.1.1.1 | None | ERR4816266 | Other | lineage3 | None | ERR4816360 | Sensitive | lineage4.8 | None | ERR4816265 | Other | lineage4.7 | None | ERR4816334 | Other | lineage4.6.2.2 | None | ERR4816333 | MDR-TB | lineage2.2.1 | None | ERR4816283 | Other | lineage4.1.2.1 | None | ERR4817060 | RR-TB | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4817368 | Other | lineage4.6.3 | None | ERR4817110 | Other | lineage4.1.1.3 | None | ERR4817070 | Other | lineage1.1.2 | None | ERR4816397 | Other | lineage1.1.2 | None | ERR4816429 | Other | lineage1.1.2 | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR4816493 | Other | lineage4.1.2.1 | None | ERR4816464 | Other | lineage3 | None | ERR4816470 | Other | lineage3 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4816488 | HR-TB | lineage4.6.2.2 | None | ERR4816545 | Other | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR4816562 | Other | lineage4 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR4816579 | Other | lineage3 | None | ERR4816677 | Other | lineage4.5 | None | ERR4816609 | Other | lineage2.2.1 | None | ERR4816628 | Other | lineage3 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816614 | Other | lineage1.1.2 | None | ERR4817175 | Other | lineage4.8 | None | ERR4816657 | Other | lineage3.1.2.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816699 | Other | lineage4.6 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4816696 | Other | lineage3 | None | ERR4816804 | Other | lineage4.1 | None | SRR4033888 | Sensitive | lineage4.3.2.1 | None | ERR4816782 | Other | lineage4.1.2.1 | None | ERR4817497 | Other | lineage1.1.2 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817427 | Other | La3 | None | ERR4816756 | RR-TB | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4817435 | Other | lineage1.1.3.1 | None | ERR4817434 | Other | lineage3 | None | ERR4816810 | Sensitive | lineage1.1.3.1 | None | ERR4816883 | Other | lineage4.5 | None | ERR4816813 | Sensitive | lineage4.3.4.2 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4817275 | Other | lineage4.2.2 | None | ERR4816872 | Other | lineage4.7 | None | ERR4816876 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR4817293 | Sensitive | lineage4.1.2 | None | ERR4816818 | Other | lineage4.8.2 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4816869 | Other | lineage4.3.3 | None | ERR4816882 | Other | lineage4.8 | None | ERR4816890 | HR-TB | lineage4.6.2.2 | None | ERR4817452 | Other | lineage4.8 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4816920 | Sensitive | lineage4.1.1.3 | None | ERR4817665 | Other | lineage4.8 | None | ERR4818655 | Other | lineage4.3.3 | None | ERR4817688 | Other | lineage4.3.4.2 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4818663 | Other | lineage3 | None | ERR4817710 | Other | lineage1.1.2 | None | ERR4817765 | Other | None | ERR4817780 | Other | lineage4.7 | None | ERR4816425 | Other | lineage2.2.2 | None | ERR4818691 | Other | lineage4.8 | None | ERR2512986 | Other | lineage3 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4817811 | Sensitive | lineage4.1.2.1 | None | ERR4817858 | Sensitive | lineage1.1.2 | None | ERR4817853 | Other | lineage4.8.1 | None | ERR4817906 | Other | lineage4.8 | None | ERR4817874 | Other | lineage3 | None | ERR4818714 | Other | lineage4.8 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR4817917 | Other | lineage2.2.1 | None | ERR2510736 | Other | lineage4.1.2.1 | None | ERR4817958 | Other | lineage4.2.1 | None | ERR4818735 | Sensitive | lineage4.3.3 | None | ERR2510804 | Other | lineage2.2.1 | None | ERR4819012 | Other | lineage1.1.2 | None | ERR4818752 | Other | lineage3 | None | ERR4817998 | Other | lineage3 | None | ERR2510790 | Other | lineage4.6.2.2 | None | ERR2510794 | Other | lineage4.3.4.2 | None | ERR4818064 | Other | lineage4.8 | None | ERR4818008 | Other | lineage4.3.3 | None | ERR4818028 | Other | lineage4.1.2.1 | None | ERR4818776 | Other | lineage2.2.1 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR4818027 | Other | lineage4.8 | None | ERR3275866 | Other | lineage4.1.2.1 | nl | ERR2515055 | Other | lineage3 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818797 | Other | lineage4.5 | None | ERR2513440 | Other | lineage4.1.1.3 | None | ERR4818116 | Other | lineage4.3.4.2 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818825 | HR-TB | lineage4.1.2.1 | None | ERR4818817 | Other | lineage1.1.2 | None | ERR4818176 | Other | lineage4.1.2.1 | None | ERR4818179 | Other | lineage4.1.1 | None | ERR718405 | Other | lineage2.2.1 | th | ERR4818173 | Other | lineage2.2.1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818182 | HR-TB | lineage3.1.2.1 | None | ERR4819035 | Other | lineage4.8 | None | ERR4818188 | Other | lineage4.1.2.1 | None | SRR5818591 | Other | lineage4.2.2.2 | dj | ERR4818322 | Other | lineage4.1.2.1 | None | ERR4818313 | Other | lineage2.2.1 | None | ERR4819087 | Other | lineage4.3.3 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818355 | Other | lineage3 | None | ERR4818330 | HR-TB | lineage4.8 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR3275946 | Other | lineage4.5 | nl | ERR4818384 | Other | lineage4.8 | None | ERR4818925 | Other | lineage1.2.1.2.1 | None | ERR4818417 | Other | lineage4.1.2.1 | None | ERR4818436 | Other | lineage4.8 | None | ERR4818471 | Other | lineage2.2.1 | None | ERR4818449 | Other | lineage4.3.3 | None | ERR2513259 | Other | lineage3 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR2509886 | RR-TB | lineage3 | None | ERR4818565 | Other | lineage4.8 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4818548 | Other | lineage4.3.3 | None | ERR4818952 | Other | lineage3 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | ERR4818576 | Other | lineage3.1.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR2512832 | Other | lineage4.3.4.1 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007174 | Other | lineage4.3.4.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4817551 | Other | lineage4.9 | None | SRR5007180 | Other | None | ERR4817547 | Other | lineage4.2.2.1 | None | SRR5007186 | Other | lineage4.6 | None | ERR4817569 | Other | lineage4.3.4.1 | None | ERR4817555 | RR-TB | lineage3 | None | ERR2513348 | Other | lineage3 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4817591 | Other | lineage4.1.2.1 | None | ERR4817618 | Other | lineage4.8.1 | None | ERR4817616 | Other | lineage3 | None | ERR4817645 | Other | lineage4.8 | None | ERR4818634 | Other | lineage4.6.1 | None | ERR4817634 | Other | lineage3.1.2.1 | None | ERR4818637 | Other | lineage4.8 | None | ERR4819140 | Other | lineage4.1.2.1 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4819143 | Other | lineage3.1.2.1 | None | ERR2512941 | Other | lineage1.1.2 | None | ERR4820209 | HR-TB | lineage4.1.2 | None | ERR4819133 | Other | lineage1.2.2.2 | None | ERR4820247 | HR-TB | lineage4.9 | None | ERR4819144 | Other | lineage4.4.1.1 | None | ERR4820717 | Other | lineage1.1.3 | None | ERR4820242 | Other | lineage1.2.2.1 | None | ERR2513681 | Other | lineage1.1.2 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819192 | Other | lineage3 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4820713 | HR-TB | lineage4.8 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4819246 | Other | lineage3.1.2 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4819206 | Other | lineage4.8 | None | ERR4819224 | Other | lineage1.2.1.2.1 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4819307 | RR-TB | lineage4 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR2515413 | Sensitive | lineage3.1.1 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4819262 | Other | lineage4.1.2.1 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4819287 | Other | lineage1.1.3.3 | None | ERR4819328 | Sensitive | lineage4.3.3 | None | ERR4819313 | Other | lineage3.1.1 | None | ERR4820725 | Other | lineage4.1.2.1 | None | ERR2513929 | Other | lineage4.1.1.2 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR2513924 | RR-TB | lineage4.8 | None | ERR4819347 | Other | lineage4.1.2.1 | None | ERR4820730 | Other | lineage4.8 | None | ERR4820310 | Other | lineage4.1.2.1 | None | ERR4819377 | Other | lineage4;lineage3.1.2.1 | None | ERR4820332 | Other | lineage2.2.1 | None | ERR4819378 | Other | lineage4.8 | None | ERR2514073 | Other | lineage4.1.1.3.1 | None | ERR4819394 | Other | lineage4.8 | None | ERR4820338 | Other | lineage4.2.2.2 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4820335 | Other | lineage4.1.2.1 | None | ERR4819447 | Other | lineage4.1.2 | None | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820369 | Other | lineage2.2.1 | None | ERR4819456 | Other | lineage4.8 | None | ERR4819481 | Other | lineage4.3.3 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4819513 | Other | lineage4.3.2 | None | ERR4819453 | Other | lineage4.8 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4819501 | Other | lineage4.1.2.1 | None | ERR4819518 | Other | lineage4.1.1 | None | ERR4819515 | HR-TB | lineage4.2.1 | None | ERR2514261 | Other | lineage3 | None | ERR4820397 | Other | lineage4.9 | None | ERR4820748 | Other | lineage3 | None | ERR4819550 | Other | lineage3 | None | ERR4819525 | Other | lineage3 | None | ERR4819535 | HR-TB | lineage4.8 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4819555 | Other | lineage4.8 | None | ERR4819553 | Other | lineage4.1.4 | None | ERR4819567 | Other | lineage2.2.1 | None | ERR4819597 | Other | lineage2.2.1.1 | None | ERR4820408 | Other | lineage4.1.2.1 | None | ERR4819615 | Other | lineage4.3.4.2.1 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR2514389 | Other | lineage3 | None | ERR2514394 | Other | lineage4.3.4.2 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4820416 | Other | lineage4.1.2.1 | None | ERR4819679 | Other | lineage3 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4819655 | Other | lineage4.8 | None | ERR4819683 | Other | lineage4.1.4 | None | ERR4820864 | Other | lineage4.9;lineage4.8 | None | ERR4820449 | Other | lineage4.1.2.1 | None | ERR4819752 | Other | lineage4.4.1.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR6398013 | Sensitive | lineage4.1.2 | ca | ERR4819723 | Other | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4819766 | Other | lineage4.4.1.1 | None | ERR4819765 | Other | lineage4.1 | None | ERR4819844 | Other | lineage4.8 | None | ERR2514645 | Other | lineage4.3.4.1 | None | ERR4820492 | Other | lineage2.2.1 | None | ERR4820490 | Other | lineage3 | None | SRR6153166 | Other | lineage1.2.1.2.1 | ca | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4820801 | Other | lineage1.2.2 | None | ERR4819842 | Other | lineage4.1.2.1 | None | ERR4820862 | Other | lineage2.2.1.1 | None | ERR4820543 | Other | La3 | None | ERR4819867 | Other | lineage1.1.3.2 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR6398035 | Other | lineage4.3.3 | ca | SRR6397975 | Sensitive | lineage4.1.2.1 | ca | SRR6153151 | Sensitive | lineage1.2.1.2.1 | ca | ERR2514854 | Other | lineage4.3.3 | None | ERR4819967 | Other | lineage4.3.3 | None | ERR2514857 | Other | lineage2.2.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4820827 | Other | lineage4.1.2 | None | ERR4819962 | Other | lineage4.4.1.1 | None | ERR4820012 | Other | lineage4.1.2.1 | None | ERR4820829 | Other | lineage4.8 | None | ERR4819980 | Other | lineage4.1.2.1 | None | ERR2515007 | Other | lineage3 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820026 | Other | lineage3 | None | ERR4820833 | HR-TB | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820622 | Other | lineage4.3.4.2 | None | ERR4820059 | Other | lineage3 | None | ERR4820162 | Other | lineage4.1.1.3 | None | ERR4820653 | Other | lineage2.2.1.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820192 | Other | La3 | None | ERR4820107 | RR-TB | None | ERR4820135 | Other | lineage4.1.2.1 | None | ERR4820679 | Other | lineage4.8 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4820194 | Other | La3 | None | ERR4821778 | Other | lineage4.1.3 | None | ERR4821775 | Other | lineage4 | None | ERR4821796 | Other | lineage4.1.1 | None | ERR4821777 | Other | lineage2.2.1.1 | None | ERR4821791 | HR-TB | lineage4.1.2.1 | None | ERR4820967 | HR-TB | None | ERR4821776 | Sensitive | lineage4.2.2.2 | None | ERR4820970 | Other | lineage4 | None | ERR4820988 | Other | lineage4.1.2.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4821030 | Other | lineage4.8 | None | ERR4821817 | Other | lineage4.9 | None | ERR4821028 | Sensitive | lineage3.1.1 | None | SRR6046089 | Other | lineage4.1.2.1 | None | ERR4821838 | Other | lineage2.2.1 | None | SRR6045445 | Other | lineage4.3.1.1 | None | ERR4821069 | Other | lineage3 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR4821829 | Other | lineage1.1.2 | None | ERR4821109 | Other | lineage4.1.2.1 | None | SRR6046096 | Other | lineage4.1.2.1 | None | SRR6045480 | Other | lineage4.1.1 | None | ERR4821879 | Other | lineage4.6.1.1 | None | SRR6045485 | Other | lineage4.9 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR2660505 | Other | lineage1.2.2.1 | None | ERR4821880 | HR-TB | lineage1.1.2 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4821891 | Other | lineage4.8 | None | ERR4821887 | Other | lineage4.1.2.1 | None | ERR4821915 | RR-TB | lineage4.9 | None | ERR4821899 | Other | lineage4.1 | None | ERR4821908 | Other | lineage4.8 | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821214 | RR-TB | None | ERR4821208 | Other | lineage4.3.2.1 | None | ERR4821927 | HR-TB | lineage4.3.4.1 | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821239 | Other | lineage4.1.2.1 | None | ERR4821210 | Other | lineage4.8 | None | ERR4821229 | Other | lineage2.2.1 | None | ERR4821264 | Other | lineage1.1.3 | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821310 | Other | lineage5 | None | ERR4821302 | Sensitive | lineage5.1.4 | None | ERR4821341 | Other | lineage4.3.4.1 | None | ERR4821331 | HR-TB | lineage4.8 | None | ERR4822017 | HR-TB | lineage2.2.1 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4821360 | Other | lineage4.1.2.1 | None | ERR4821373 | HR-TB | lineage4.1.2.1 | None | ERR4821368 | Other | lineage1.1.1 | None | ERR4821409 | Other | lineage4.8 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4821526 | Other | lineage4.3.2 | None | ERR4821413 | Other | La3 | None | ERR4821477 | Other | lineage4.8 | None | ERR4821492 | HR-TB | lineage3 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4821420 | Other | lineage4.1.2.1 | None | ERR4822104 | RR-TB | lineage3 | None | ERR4822105 | Other | lineage4.1 | None | ERR4821530 | HR-TB | lineage4.3.4.1 | None | ERR4821584 | Other | lineage4.8.2 | None | ERR4822170 | Other | lineage4.1.1.3 | None | ERR4821572 | Other | lineage2.1 | None | ERR4821538 | Other | lineage3 | None | ERR4822173 | Other | lineage4.7 | None | ERR4821568 | Other | lineage4.3.4.2.1 | None | ERR4821610 | Other | lineage4.3.2 | None | ERR4822224 | HR-TB | lineage4.2.1 | None | ERR4821602 | Other | lineage4.8 | None | ERR4821612 | Other | lineage2.2.1.1 | None | ERR4822232 | Other | lineage4.3.4.2 | None | SRR6045591 | Other | lineage4.1.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4822280 | Other | lineage4.1.3 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045565 | Other | lineage4.6.2.2 | None | ERR4821712 | HR-TB | None | ERR4821773 | Other | La1.6 | None | SRR6045599 | Other | lineage4.8 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6046135 | Other | lineage4.1.2.1 | None | SRR6045618 | Other | lineage3.1.2 | None | SRR6045614 | Other | lineage4.8 | None | SRR6045705 | Other | lineage4.9 | None | SRR6045743 | Other | lineage3 | None | SRR6045709 | Other | lineage4.1.2.1;lineage2.2.1 | None | SRR6045726 | Other | lineage3 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR6045763 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818656 | Sensitive | lineage3 | None | SRR5818690 | Other | lineage4.2.2.2 | None | SRR6045793 | HR-TB | lineage3.1.1 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR5818670 | Other | lineage4.1.2.1 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6045855 | Sensitive | lineage3 | None | SRR6045894 | Other | lineage4.8 | None | SRR6044774 | Other | lineage3 | None | SRR6044916 | Other | lineage4.1.1 | None | SRR6044817 | Other | lineage3 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045925 | Other | lineage4.2 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044872 | Sensitive | lineage3.1.2.1 | None | SRR6044904 | Other | lineage3 | None | SRR6044936 | Other | lineage4 | None | SRR6044957 | Other | lineage4.8.2 | None | SRR6046020 | Other | lineage3 | None | SRR6044993 | Other | lineage3 | None | SRR6045024 | Other | lineage4.1.1.2 | None | SRR6045986 | Other | lineage3 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6045064 | Other | lineage4.3.1.1 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6045110 | Other | lineage3 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6045164 | Other | lineage4.1.2.1 | None | SRR6045163 | Other | lineage2.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045178 | Other | lineage3 | None | SRR6045289 | Other | None | SRR6046208 | Other | lineage4 | None | SRR6045199 | Other | lineage2.2.1 | None | SRR6045222 | Other | lineage4.1.2.1 | None | SRR6046197 | Other | lineage4.3.3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045293 | Sensitive | lineage3 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6045295 | Other | lineage4.7 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045321 | Other | lineage1.1.3.1 | None | SRR6045379 | Other | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6045399 | Other | None | SRR6046246 | Other | lineage3 | None | SRR6046239 | Other | lineage4.9;lineage3 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046281 | Other | lineage4.9 | None | SRR6046291 | Other | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | ERR4829208 | RR-TB | lineage4.8 | None | SRR6046376 | Other | lineage3 | None | SRR6046420 | Other | lineage3 | None | ERR2851359 | Other | lineage4.9 | None | SRR6046463 | Other | lineage4.4.1.1 | None | ERR4829313 | Pre-XDR-TB | lineage4.8 | None | ERR4829328 | Other | lineage2.2.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046481 | Other | lineage4.1.1.3.1 | None | SRR6046483 | Other | lineage4.6.3 | None | SRR6046517 | Other | lineage4.8 | None | SRR6046541 | Other | lineage4.9 | None | SRR6046607 | Other | lineage3 | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046729 | Other | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR6046739 | Other | lineage1.1.2 | None | SRR6046764 | Other | lineage4.2.2 | None | SRR6046891 | Other | lineage4.7 | None | SRR6046815 | Other | lineage3 | None | SRR6046824 | HR-TB | None | SRR6046767 | RR-TB | lineage2.2.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046874 | Other | lineage4.5 | None | SRR6367397 | Other | lineage4.1.2.1 | None | SRR6153150 | Other | lineage3.1.1 | None | SRR6511600 | MDR-TB | lineage4.3.4.2 | None | ERR4814954 | Other | lineage3.1 | gb | ERR4816353 | Sensitive | lineage2.2.1 | gb | ERR4817309 | Other | lineage4.5 | gb | ERR4815053 | Other | lineage4.1.2.1 | gb | SRR6824324 | Other | lineage4.5 | None | ERR4815101 | Other | lineage3 | gb | ERR4815137 | Other | lineage4.1 | gb | SRR6896535 | Other | lineage4.1.1.3 | None | ERR4816688 | Other | lineage4.2.2.2 | gb | ERR4815169 | Other | lineage4.8 | gb | ERR4863405 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6832766 | Sensitive | lineage4.3.3 | None | ERR4817463 | Other | La3 | gb | SRR6855828 | Other | lineage4.3.2.1 | None | ERR4816718 | Other | lineage4.1.2.1 | gb | ERR4815425 | Other | lineage4.5 | gb | ERR4815407 | Other | lineage1.1.2 | gb | ERR4817475 | Other | lineage4.1.1.3 | gb | ERR4815503 | Other | lineage2.2.1.1 | gb | ERR4815472 | Other | lineage4.9 | gb | ERR4816828 | Other | lineage1.1.1 | gb | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4815684 | Other | lineage5.1.4 | gb | ERR4817795 | Other | lineage4.7 | gb | ERR4815584 | Other | lineage4.3.4.2.1 | gb | ERR4815837 | Other | lineage4.1.4 | gb | ERR4815917 | Other | lineage2.2.1 | gb | ERR4817797 | Other | lineage3 | gb | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR4817619 | Other | lineage4.1.2.1 | gb | ERR4817972 | Other | lineage4.1.1.3 | gb | ERR4816129 | HR-TB | lineage4.6.2.2 | gb | ERR4817926 | HR-TB | lineage4.6.2.2 | gb | ERR4816089 | Other | lineage4.2.2.2 | gb | ERR4817970 | MDR-TB | lineage2.2.1 | gb | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | SRR7131028 | Other | lineage4.8 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR7131026 | Other | lineage2.2.1 | None | SRR7131068 | Other | lineage4.8 | None | SRR7131031 | Other | lineage4.2.2.2 | None | SRR7131032 | Other | lineage2.2.1 | None | SRR9971256 | MDR-TB | lineage2.2.1 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131075 | Other | lineage4.8 | None | SRR7131108 | Other | lineage4.4.1.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131142 | Other | lineage3 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7131163 | Other | lineage2.2.1 | None | SRR7131169 | Other | lineage4.1.2.1 | None | SRR8217893 | HR-TB | lineage2.2.1 | None | SRR7131198 | Other | lineage4.3.3 | None | SRR7131201 | Other | lineage4.8 | None | SRR7131251 | Other | lineage2.2.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131233 | MDR-TB | lineage4.3.3 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR7131239 | HR-TB | lineage4.3 | None | SRR7131237 | Other | lineage2.2.1 | None | SRR7131257 | Other | lineage6.3.1 | None | SRR7496471 | Sensitive | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR4818013 | Other | lineage4.3.3 | gb | SRR9971087 | MDR-TB | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR9971351 | RR-TB | lineage2.2.1 | None | SRR833035 | MDR-TB | lineage4.1.1 | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR9971068 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971369 | MDR-TB | lineage4.1.1.3 | None | SRR833150 | MDR-TB | lineage4.1.1 | None | ERR4818187 | Other | lineage4.6.1.1 | gb | SRR9970996 | XDR-TB | lineage4.4.1.1 | None | SRR9970995 | XDR-TB | lineage4.3.3 | None | SRR9971017 | HR-TB | lineage2.2.1 | None | SRR9971025 | Other | lineage2.2.1 | None | ERR4819770 | Other | lineage4.8 | gb | SRR9971101 | XDR-TB | lineage4.1.2.1 | None | SRR9971147 | RR-TB | lineage2.2.1 | None | SRR9971163 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971185 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR4818192 | Other | lineage4.1.2.1 | gb | SRR9971235 | XDR-TB | lineage4.4.1.1.1 | None | ERR4820424 | Other | La1.8.1 | gb | ERR4819166 | Other | lineage3 | gb | ERR4819142 | Other | lineage4.7 | gb | ERR4818431 | Other | lineage1.1.2 | gb | ERR4818509 | RR-TB | La1.2.BCG | gb | ERR4818497 | HR-TB | lineage3 | gb | ERR4818465 | Other | lineage3 | gb | ERR4819576 | Other | lineage4.2.2 | gb | ERR4819324 | Other | lineage4.8 | gb | ERR10219876 | Other | lineage4.3.4.2 | None | ERR4820467 | Other | lineage4.8 | gb | ERR4819583 | Other | lineage1.1.2 | gb | ERR4819699 | HR-TB | lineage4.6.2.2 | gb | ERR4818855 | Other | lineage4.1.2.1 | gb | ERR4818853 | Other | lineage4.1.2 | gb | ERR4820188 | Other | lineage3 | gb | ERR10796557 | Other | lineage4 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | ERR10762483 | MDR-TB | lineage2.2.1 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10796556 | Other | lineage4.3.4.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796574 | Other | lineage4.9 | None | ERR10796573 | Other | lineage4.8 | None | ERR10796616 | Other | lineage4.8 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796586 | Other | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796615 | Other | lineage4 | None | ERR10796581 | HR-TB | lineage4.1.2 | None | ERR10796590 | Other | lineage4.9 | None | ERR10796592 | Other | lineage4 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796622 | Other | lineage4.8 | None | ERR10796621 | Other | lineage4.8 | None | ERR10796624 | Other | lineage4.8 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR10796630 | HR-TB | None | ERR10796627 | Other | lineage4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR4821615 | Other | lineage4.8 | gb | ERR10796634 | Other | lineage4 | None | ERR4822200 | Other | lineage4.3.4.1 | gb | ERR4820611 | Other | lineage4.4.1.1 | gb | ERR4822171 | Other | lineage3 | gb | ERR4822190 | Other | lineage1.1.3.1 | gb | ERR4820787 | Other | lineage3.1.1 | gb | ERR4820922 | Other | lineage4.1.2.1 | gb | ERR4820889 | Other | lineage3 | gb | ERR4821865 | Other | lineage2.2.1 | gb | ERR4820944 | Other | lineage4.1.1.3 | gb | ERR3261351 | Other | lineage4.9 | None | ERR4821924 | HR-TB | lineage4.6.2.2 | gb | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR3261389 | Other | lineage4.9 | None | ERR4821175 | Other | lineage2.2.1.1 | gb | ERR3261359 | Other | lineage4.9 | None | ERR3804166 | Other | lineage4.3.2 | None | ERR4822021 | Other | lineage4.8 | gb | ERR4821263 | Other | lineage4.1.3 | gb | ERR4822032 | Other | lineage2.2.1 | gb | ERR2514673 | Sensitive | lineage4.1.2.1 | gb | ERR4596929 | MDR-TB | lineage4.2.2.2;lineage3 | None | ERR4192392 | Other | lineage6.1.1 | None | ERR4192413 | Other | lineage6.1.1 | None | ERR4192550 | Other | lineage6.1.1 | None | ERR473346 | Other | lineage1.1.3.2 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR2513837 | Sensitive | lineage4.1.2.1 | gb | ERR2516042 | Other | lineage4.1.1.3 | za | ERR2515818 | Other | lineage4.3.2.1 | za | ERR5336160 | Other | lineage6.3.2 | None | ERR5865302 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865303 | Pre-XDR-TB | lineage2.2.1 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6197034 | Other | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197023 | MDR-TB | lineage4.7;lineage4.3.4.2 | None | ERR6197032 | Other | lineage4.9 | None | ERR773806 | Sensitive | lineage2.2.1 | None | ERR6197036 | Other | lineage4 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR9117681 | Other | lineage4.3.3 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR9117675 | Other | lineage4.8 | None | ERR7975629 | XDR-TB | lineage2.2.1 | None | ERR9117676 | Other | lineage4.2.2.2 | None | ERR9117714 | Other | lineage3.1.2 | None | ERR9117699 | Other | lineage4.1.2.1 | None | ERR9117695 | Other | lineage4.1.2.1 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117725 | Other | lineage4.1.1 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117728 | Other | lineage3 | None | ERR9117730 | Other | lineage1.1.2 | None | ERR9117729 | Other | lineage3 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117750 | HR-TB | lineage4.5 | None | ERR9117763 | HR-TB | lineage3 | None | ERR9117795 | Sensitive | lineage4.7 | None | ERR9117780 | Other | lineage4.1.2.1 | None | ERR9117799 | Sensitive | lineage4.8 | None | ERR9117771 | Sensitive | lineage4.8.2 | None | ERR9907760 | Pre-XDR-TB | lineage4.3 | None | ERR9117814 | Sensitive | lineage3 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9786452 | Other | lineage4.3.2 | None | ERR9907785 | RR-TB | lineage4.3.2.1 | None | ERR9117806 | Other | lineage4.8 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9117841 | Other | lineage4.8.2 | None | ERR9901813 | RR-TB | lineage4.1.4 | None | ERR9907741 | MDR-TB | lineage4.3.2.1 | None | ERR9907780 | MDR-TB | lineage4.8.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315462 | RR-TB | lineage4.3.2.1 | None | SRR10315486 | MDR-TB | lineage2.2.1 | None | SRR10315476 | MDR-TB | lineage4.8 | None | SRR10315596 | RR-TB | lineage4.7 | None | SRR10315499 | MDR-TB | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315587 | RR-TB | lineage4.1.1.3 | None | SRR10315635 | RR-TB | lineage2.2.1 | None | SRR10315610 | RR-TB | lineage4.2.2.2 | None | SRR10315630 | MDR-TB | lineage4.3.3 | None | SRR10315660 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315641 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315674 | MDR-TB | lineage2.2.1 | None | SRR10315658 | RR-TB | lineage4.3.2.1 | None | SRR10315711 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315709 | MDR-TB | lineage2.2.1 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315728 | MDR-TB | lineage4.8;lineage4.4.1.1.1 | None | SRR10851656 | Sensitive | lineage4.3.3 | None | SRR10315715 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342656 | MDR-TB | lineage2.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR11342692 | MDR-TB | lineage2.2.1 | None | SRR11349136 | MDR-TB | lineage4.1.2.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11349149 | RR-TB | lineage2.2.1 | None | SRR11349137 | RR-TB | lineage4.4.1.1.1 | None | SRR11349148 | RR-TB | lineage2.2.1 | None | SRR11349138 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349152 | XDR-TB | lineage4.3.3 | None | SRR11349150 | MDR-TB | lineage4.1.1.3 | None | SRR11349151 | MDR-TB | lineage2.2.1 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR11349159 | MDR-TB | lineage2.2.2 | None | SRR11349160 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349168 | MDR-TB | lineage2.2.2 | None | SRR11349196 | MDR-TB | lineage2.2.1 | None | SRR11349182 | MDR-TB | lineage2.2.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349179 | MDR-TB | lineage2.2.1 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR11349205 | MDR-TB | lineage2.2.1 | None | SRR1140942 | Other | None | SRR11349210 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349208 | MDR-TB | lineage2.2.1 | None | SRR1172753 | MDR-TB | lineage4.4.1.1.1 | None | SRR1169247 | MDR-TB | lineage2.2.2 | None | SRR1173040 | MDR-TB | lineage4.4.1.1.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1173074 | Other | lineage4.9 | None | SRR1184379 | Other | lineage4 | None | SRR1175073 | Other | lineage4.9 | None | SRR1196557 | HR-TB | lineage4.9;lineage2.2 | None | SRR11972323 | RR-TB | lineage1.1.3.2 | None | SRR11972214 | Sensitive | lineage2.2.1 | None | SRR12199387 | Other | lineage1.1.3 | None | SRR11972447 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None |
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