Rv1630 - c.786G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
17 Sensitive
31 RR-TB
17 HR-TB
13 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 36 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage4.8 | 10 |
| lineage4.3.3 | 3 |
| lineage3 | 3 |
| lineage5.1.1 | 1 |
| lineage2.2.1 | 6 |
| La1.8.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage2.2;lineage4 | 1 |
| lineage4.6.1.2 | 5 |
| lineage4.5 | 1 |
| lineage1.1.3.1 | 1 |
| La1.6 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| 2 | |
| lineage4.8.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1735596 | RR-TB | lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR3797085 | Other | lineage4.9 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR1196545 | Sensitive | lineage4.9 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816656 | Other | lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819241 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4815079 | RR-TB | lineage3 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR502474 | RR-TB | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR108125 | RR-TB | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR11465626 | Sensitive | lineage4.3.4.2.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR6046737 | Other | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR4817069 | RR-TB | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4798823 | HR-TB | None | ERR502481 | RR-TB | lineage4.9 | None |
|---|
