Rv0701 - c.-106T>C


Drug resistance types
106 Sensitive 34 RR-TB 161 HR-TB 71 MDR-TB 13 Pre-XDR-TB 3 XDR-TB 260 Other
lineage Counts
lineage Count
lineage4.9;lineage6.3 9
lineage2.2.1 31
M.canetti;lineage2.1;lineage4.9 26
lineage4.9 223
lineage2.1;lineage4.9 20
lineage4.3.2 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.2.1 2
lineage4 7
lineage2.1;lineage4.9;lineage6.3 10
La2;lineage4.9;lineage9 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.3.4.2 2
lineage4.1.1.3 4
lineage4.1.3 2
28
lineage4.1.2.1.1 1
La3;lineage4.9 10
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage2.1 5
La1;lineage4.9 3
lineage1.1.3.1 1
M.canetti;lineage4.9 4
lineage4.3.3;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.3.4.1 2
lineage4.9;lineage7 4
La3;lineage2.2.1 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9 12
lineage1.1 1
lineage4.1.2.1 20
lineage4.3.3 7
lineage2.2 5
lineage3 9
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.4.1.1 4
lineage4.3.4.2.1 6
M.canetti;lineage2.2 3
La1.7.1 2
lineage4.1.2.1;lineage4.4.1.1 1
La1.8.1 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La1.7;lineage4.9;lineage6 1
lineage4.6.1.1 3
La3;M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.1.2 2
lineage4.8 14
La3;lineage4.8 1
lineage4.3.4 1
lineage1.1.3.2 1
La1.7.X-unk4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage4.3.2 1
lineage4.7 2
lineage2.2.1;lineage3 2
La3 2
La1;lineage4.1.2 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2.1;lineage4.9 3
M.canetti;lineage2.1;lineage6.3 2
lineage6.1.1 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage3.1 1
lineage2.1;lineage2.2;lineage6.3 1
lineage4.6.2.2 2
La1.7;lineage4.2 1
La1.2.BCG 1
M.canetti;lineage2.1;lineage3 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.7;lineage4.9 6
lineage2.2.2;lineage4 1
lineage4.8;lineage4.9 2
lineage4.3.2;lineage4.9 1
lineage1.2.1.2 1
La1.6;lineage4 1
lineage4.1.2.1;lineage4.4.1 1
lineage2.2.1;lineage4.9 3
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.9;lineage6.1.3 1
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage2.2.1.2;lineage7 1
M.canetti;lineage4.9;lineage9 1
lineage6.3.1 1
La3;lineage2 1
La2;lineage2.2 1
lineage1.1.2 2
lineage2;lineage4.9 1
La3;lineage1.1.2 1
lineage4.1.2 1
lineage3.1.2.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage1.1;lineage4 1
La3;lineage3 1
lineage2.2;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
La2;lineage4.9 2
lineage1;lineage4.9 1
lineage4.9;lineage9 3
lineage2.2.1;lineage6.3 1
La1.2;La1.8.1 1
lineage4.2.2.2 1
lineage1.1.2;lineage4 1
lineage4.1.1.2 1
La1.7.1;lineage4.9 1
lineage1.2.2.2 1
lineage5.2 2
lineage2.1;lineage6.3 2
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.8.1 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage1.2.1.2.1 1
La1.7;lineage4.9;lineage7 3
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.3.2.1 2
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.1.1.1 3
lineage6.1.3 1
La3;lineage2.1;lineage6.3 1
lineage4.4.1.1.1 1
M.canetti;lineage2.1;lineage4 1
La3;M.canetti;lineage2.2.1 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.2.1;lineage4 1
lineage2.2.2 1
lineage4.4 1
lineage3.1.2.2 1
La3;lineage4.3.4 1
M.canetti;lineage4.3.1;lineage4.9 1
M.canetti;lineage1 1
lineage3.1.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.5 1
La1.7.1;La1.7.X-unk4 1
La1;lineage2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.6.3;lineage4.9 1
lineage4.6.5 1
spoligotype Counts
spoligotype Count
None 648
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675524 Other lineage4.9;lineage6.3 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR751326 Other lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR2229143 RR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
SRR6785268 Sensitive lineage4.2.1 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283044 Other lineage4 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1180319 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR29096900 Sensitive lineage4.3.4.2 None
SRR1165699 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR11465025 Other lineage4.1.1.3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7535086 Other None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR5341453 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR702406 Other lineage2.1 None
ERR133825 HR-TB La1;lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13861397 HR-TB lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9117709 Other None
ERR4816656 Other lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR3675441 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675549 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR11466499 Other lineage4.3.4.1 None
ERR473332 Other lineage4.9 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1175512 Sensitive lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR1180399 Sensitive lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
SRR6046737 Other lineage4.9 None
ERR12268442 Other lineage4.1.2.1 None
ERR6359082 Other lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
ERR4811493 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR20970016 Other lineage2.2 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173118 Other lineage2.2.1 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR28044634 Other lineage3 None
ERR2514692 Other None
SRR5341387 Other lineage4.9 None
SRR25827682 Other None
ERR212001 HR-TB None
ERR9787197 Other None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6789621 Other lineage4.9 None
ERR4817060 Other None
ERR234659 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4769442 Sensitive lineage4.9 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR1162864 Other lineage4.1.2.1 None
SRR21690574 Other lineage4.1.2.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR176778 HR-TB lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1180355 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR3675487 Other M.canetti;lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
SRR1173453 Other lineage4.4.1.1 None
SRR1180312 Sensitive lineage4.9 None
ERR9786604 Other None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR11462861 Other La1.8.1 None
SRR3675243 Other lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
SRR1173363 Other None
SRR6045002 RR-TB lineage4.9 None
SRR6046382 Sensitive lineage2.2.1 None
SRR1640750 Other None
SRR17832802 HR-TB lineage3 None
ERR4815752 Other lineage4.9 None
SRR3675572 Other None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR323066 Sensitive lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR3283040 HR-TB lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1196583 Other lineage4.9 None
ERR3468607 Other lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR29016780 Other lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
SRR3675275 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18213713 HR-TB None
SRR1175127 Other lineage2.2.1.2 None
ERR978765 RR-TB lineage4.8 None
ERR4817893 Other La3;lineage4.8 None
SRR6044875 Sensitive lineage4.9 None
ERR4819357 Sensitive lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR1063896 Sensitive None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1710057 Other lineage2.1 None
ERR7821126 Sensitive lineage1.1.3.2 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
SRR1175074 Other None
SRR1180300 Sensitive lineage4.9 None
ERR502481 RR-TB lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR502511 Sensitive lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR18003019 Other lineage2.2.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR9119669 HR-TB lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR4816478 HR-TB lineage4 None
SRR25827856 MDR-TB lineage2.2.1;lineage3 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4769493 Other lineage4.9 None
SRR28119777 Other lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR12416842 HR-TB lineage4.9 None
SRR1172817 Other La3 None
SRR3675246 Other lineage4.9 None
SRR1172234 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR176751 Other lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3799304 Other lineage6.1.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR5341467 Other lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SAMN02414850 Other lineage4.1.2.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR11972367 Sensitive lineage2.2.1 None
ERR502470 RR-TB lineage4.9 None
ERR779852 Sensitive lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR736834 Sensitive lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675311 Other lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR5908228 RR-TB lineage4.3.3 None
SRR1181351 Sensitive lineage4.9 None
SRR7496472 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR1180996 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR6359070 Sensitive lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR1184381 MDR-TB None
SRR3675221 Other lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
SRR1172857 Other None
ERR212033 Other lineage4.9 None
SRR28119805 Other lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR181824 HR-TB lineage4.9 None
ERR2509673 Other lineage2.2.1 None
ERR502908 HR-TB lineage2.2.1 None
SRR12142341 HR-TB lineage2.1 None
SRR6044815 Other lineage4.9 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4797474 Sensitive lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR1140724 Other lineage2.2.1 None
SRR1184372 MDR-TB None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR28351554 Sensitive La1.6;lineage4 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR2693252 Sensitive lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
ERR3275201 Sensitive lineage4.8 nl
ERR3275196 Other lineage2.2.1 nl
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR4815471 Sensitive lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR1180410 Sensitive lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6866807 Other lineage4.9 None
SRR29096541 Other lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR3797023 HR-TB La1.8.1 None
ERR4798823 HR-TB lineage4 None
ERR4816322 Other lineage4.9 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1175506 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR176651 Other lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786569 Other lineage4.8 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR29097026 Other lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR2514327 HR-TB lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1180345 Other lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR29772570 Other lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR20969677 HR-TB La3;lineage2 None
SRR1180375 Sensitive lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1180391 Sensitive lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR3675482 Other lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR5535933 Other lineage4.9 None
SRR1173355 Other lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
ERR5162090 RR-TB lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR3797083 RR-TB lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341400 Sensitive lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4817667 HR-TB lineage4.8 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1196677 Other lineage2.2 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2693228 RR-TB lineage4.9 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR20969731 Other lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
SRR1166821 Other lineage4.1.2.1 None
ERR4819322 Other lineage1.1;lineage4 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1023302 MDR-TB La3;lineage3 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR5341293 Sensitive lineage4.9 None
ERR4798099 Other lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR16156775 Other lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR4815604 Other None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR1175487 Sensitive lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4816964 Sensitive lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR181887 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR2027263 Other lineage4 None
ERR1063855 Other lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR29096879 Sensitive lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR4816999 Other None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR26159043 Other lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4819051 Sensitive lineage4.9 None
SRR29016901 Other La3;lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR11081258 Other lineage4.8 None
ERR4819877 HR-TB lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR4872094 MDR-TB lineage5.2 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4814976 Other lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4800341 Other lineage3 None
ERR2446570 Sensitive lineage4.8 nl
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR1172728 RR-TB La3 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR5341308 Sensitive lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR9786346 Sensitive lineage4.3.4.2 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1180413 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
SRR5341298 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR7821163 Other lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR502912 Other lineage2.2.1 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR7131023 Other lineage4.1.2.1 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786642 Other lineage4.1.2.1 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR28119752 Other lineage4.9 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR11465024 Other lineage4.1.1.3 None
SRR6785227 Other lineage2.2.1 None
SRR7496523 Other lineage4.7 None
SRR1173633 Other lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR6046878 Other lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4818615 Sensitive None
SRR1175513 Sensitive lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1196566 Other lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR21732980 Other lineage4.3.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR29051093 Other lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4407463 HR-TB None
ERR9787165 Other lineage6.1.3 None
ERR4819241 Other lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR13861288 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1196768 MDR-TB None
ERR181744 HR-TB La3;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR5341373 Other lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR1173562 Sensitive lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9787014 Other lineage6.1.1 None
SRR3675270 Other lineage4.9 None
SRR6785267 Other lineage2.2.1 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR387051 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1173788 Sensitive lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR502474 RR-TB lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817735 Other lineage4.8 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR8665994 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR1792478 HR-TB La1.7.1 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11466072 Sensitive lineage4.3.4.2.1 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR702405 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR13285068 Sensitive lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR11466242 Sensitive lineage4.1.1.3 None
ERR11081864 Other lineage3 None
ERR323107 Sensitive lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736856 Sensitive lineage4.9 None
ERR1035157 Other lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR18910194 HR-TB lineage2.2.2 None
ERR3283030 HR-TB lineage4.9 None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
ERR3797015 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR3468544 Other lineage2.1;lineage4.9 None
SRR29051077 Other lineage4.9 None
SRR6789626 Other None
ERR4816852 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4797588 MDR-TB lineage3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR4798504 RR-TB lineage3 None
ERR5917710 Other lineage4.1.2.1 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR6359069 Sensitive lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR502473 RR-TB lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR3675248 Other lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR1196546 Other lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR3675236 Other None
ERR4816548 HR-TB lineage4.5 None
ERR9786617 Other lineage4.1.1.1 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR4821811 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR161037 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3797085 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR6359074 HR-TB lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR4814639 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4821053 RR-TB lineage3 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR1169194 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045053 Other lineage4 None
SRR7496517 Other None
SRR20969708 HR-TB lineage2.2 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6358979 Other lineage4.9 None
ERR7801175 HR-TB lineage4.6.5 None
ERR4820773 HR-TB lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
SRR1184312 Other lineage2.2.1 None
SRR13861381 HR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675461 RR-TB lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR1063862 HR-TB lineage4.9 None