EBG00000313339 - n.1207C>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
95 Sensitive
69 RR-TB
43 HR-TB
88 MDR-TB
51 Pre-XDR-TB
2 XDR-TB
596 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 205 |
| lineage4.1.2 | 10 |
| lineage4.8 | 105 |
| lineage4.3.4.2 | 7 |
| lineage2.2.1 | 121 |
| lineage1.2.2.2 | 8 |
| lineage4.1.1.3 | 17 |
| lineage4.9;lineage7 | 2 |
| lineage4.2.1 | 14 |
| lineage3 | 59 |
| lineage4.3.4.1 | 9 |
| lineage4.2.1.1 | 3 |
| lineage3.1.1 | 12 |
| lineage4.1.2.1 | 47 |
| lineage4.3.4.2.1 | 14 |
| lineage4.6.2.2 | 9 |
| lineage4.4.1.1 | 19 |
| lineage1.1.2 | 7 |
| lineage1.1.1 | 3 |
| lineage4.3.3 | 28 |
| lineage3;lineage4 | 1 |
| La1.3 | 5 |
| lineage4.2.2 | 7 |
| lineage1.2.1.1 | 2 |
| lineage4.1 | 2 |
| La1.8.1 | 9 |
| La3;lineage4.9 | 1 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| La1.2 | 6 |
| lineage5.1.4 | 1 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage4.3 | 4 |
| lineage4.4.1.1.1 | 5 |
| lineage3.1.2.1 | 7 |
| lineage1.1.3.2 | 2 |
| lineage4.1.1.1 | 8 |
| lineage4.1.3 | 2 |
| lineage4.3.2.1 | 4 |
| lineage4.3.2 | 6 |
| lineage5.1.1 | 2 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.6.1.2 | 2 |
| lineage2.2.2;lineage4 | 1 |
| lineage4.5 | 5 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage1.2.1.2 | 3 |
| lineage4.7 | 10 |
| lineage2.2.1.2 | 2 |
| lineage2.2;lineage4.9 | 2 |
| lineage4.1.1.3.1 | 4 |
| lineage2.2.2 | 12 |
| lineage3.1.2 | 3 |
| lineage3.1.3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage1 | 2 |
| lineage1.2.1.2.1 | 7 |
| lineage4.8;lineage4.9 | 2 |
| lineage4 | 6 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage6.3.1 | 1 |
| lineage1.1.3.1 | 5 |
| lineage4.2.2.2 | 12 |
| lineage4.8.1 | 5 |
| lineage4.4.2 | 2 |
| lineage4.4.1.2 | 3 |
| lineage2.2.1.1 | 8 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.3.1.1 | 7 |
| lineage4.8.2 | 2 |
| lineage4.9.1 | 2 |
| lineage4.6 | 2 |
| lineage5 | 1 |
| lineage4.3.3;lineage4.9 | 3 |
| La1.8.2 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage6 | 2 |
| lineage6.1.3 | 2 |
| La1.4 | 1 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage3.1.3 | 2 |
| lineage3.1.2.2 | 4 |
| M.canetti;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage3.1 | 2 |
| lineage4.1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage6.2.3 | 1 |
| lineage4.6.1.1 | 3 |
| lineage3.1.1;lineage4 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.4 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage1.1.1.1 | 2 |
| 1 | |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.3;lineage4.9.1 | 1 |
| lineage3;lineage4.9 | 3 |
| lineage4.1.4 | 1 |
| lineage2.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage1.2.1.2.1;lineage4.9 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 944 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | SRR7069255 | Other | lineage4.1.2 | None | SRR7069518 | Other | lineage4.8 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR7069784 | Other | lineage1.2.2.2 | None | SRR1202656 | Sensitive | lineage4.9 | None | ERR11465427 | Sensitive | lineage4.1.1.3 | None | ERR1665404 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196582 | Other | lineage4.9 | None | SRR6982400 | Other | lineage2.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR7755642 | MDR-TB | lineage4.2.1 | None | SRR1183213 | Other | lineage4.9 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR867555 | Other | lineage3 | None | SRR7070446 | Other | lineage3 | None | SRR7069946 | Other | lineage4.8 | None | ERR10796618 | Other | lineage4.3.4.1 | None | SRR1202706 | Other | lineage4.9 | None | SRR1202714 | Sensitive | lineage4.9 | None | SRR7070521 | Other | lineage4.2.1.1 | None | SRR7645927 | Other | lineage4.8 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | SRR16156775 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR1144989 | Sensitive | lineage4.8 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR176771 | Sensitive | lineage4.3.4.2.1 | None | ERR4819191 | Other | lineage4.6.2.2 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR1182908 | Other | lineage4.9 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | SRR3675252 | Other | lineage1.1.2 | None | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | ERR4769495 | Other | La1.3 | None | ERR3559287 | HR-TB | lineage4.2.2 | None | ERR4814362 | Other | lineage4.8 | None | SRR7070293 | Other | lineage4.8 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR405217 | Sensitive | lineage2.2.1 | None | ERR4627392 | Other | La1.8.1 | None | ERR473337 | Other | lineage4.1.2 | None | ERR4816852 | Other | lineage4.9 | None | ERR978693 | Other | lineage4.8 | None | ERR4820959 | Other | lineage4.1.2.1 | None | SRR1182880 | Other | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4821811 | Sensitive | lineage4.9 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | ERR4819876 | Other | lineage4.3.4.2.1 | None | ERR3559283 | HR-TB | lineage4.2.2 | None | ERR6201800 | Other | La1.2 | None | ERR502507 | Sensitive | lineage5.1.4 | None | ERR5979407 | Other | lineage3 | None | ERR2027207 | Sensitive | lineage3 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183315 | Other | lineage4.9 | None | ERR9907760 | Pre-XDR-TB | lineage4.3 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR1181193 | Other | lineage4.9 | None | SRR1182885 | Other | lineage4.9 | None | SRR1208542 | Other | lineage4.9 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR867572 | Other | lineage4.9 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SRR3675509 | Other | lineage4.9 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR7069669 | Other | lineage3.1.1 | None | ERR10796596 | Other | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11349194 | MDR-TB | lineage4.3.3 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR11349195 | MDR-TB | lineage4.4.1.1 | None | SRR11349205 | MDR-TB | lineage2.2.1 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1 | None | SRR1208944 | Other | lineage4.9 | None | SRR12882631 | Other | lineage3.1.2.1 | None | ERR6201802 | Other | La1.2 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817194 | Sensitive | lineage4.1.2.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131004 | Other | lineage4.6.2.2 | None | ERR4816417 | Other | lineage4.9 | None | ERR987704 | HR-TB | lineage4.6.1.2 | None | ERR10796582 | Other | lineage4.3.4.1 | None | SRR1183018 | Other | lineage4.9 | None | SRR18002875 | MDR-TB | lineage2.2.2;lineage4 | None | ERR10796593 | Other | lineage4.3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181299 | Other | lineage4.9 | None | SRR7069319 | Other | lineage4.5 | None | SRR11349184 | MDR-TB | lineage2.2.1 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR4586795 | Other | La1.8.1 | None | ERR9117788 | Other | lineage3 | None | SRR1202412 | Sensitive | lineage4.9 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002956 | Other | lineage2.2.1 | None | SRR1183268 | Other | lineage4.9 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | ERR4820193 | Other | lineage3 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR7070320 | Other | lineage4.8 | None | SRR7070080 | Pre-XDR-TB | lineage3 | None | SRR7645973 | Other | lineage4.3.4.1 | None | ERR978752 | Other | lineage4.8 | None | SRR6044983 | Other | lineage3.1.1 | None | ERR10796559 | Other | lineage4.9 | None | SRR1183531 | Other | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | ERR10796581 | Other | lineage4.1.2 | None | ERR4829326 | Sensitive | lineage4.7 | None | SRR3675225 | Other | lineage2.2.1.2 | None | ERR4819002 | HR-TB | lineage4.8 | None | SRR7131196 | Other | lineage4.8 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR7069013 | Other | lineage4.8 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR7069687 | Other | lineage4.1.1.3.1 | None | SRR6982066 | Other | lineage4.3.2.1 | None | SRR6044784 | Other | lineage3 | None | SRR7069725 | Sensitive | lineage4.1.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR270777 | HR-TB | lineage4.1.2 | None | SRR1173384 | Other | lineage4.9 | None | SRR1180743 | Other | lineage4.9 | None | ERR036194 | Other | lineage4.6.1.2 | None | ERR10796623 | Other | lineage4.1.1.1 | None | ERR4816692 | Other | lineage4.1.2.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | ERR978748 | Other | lineage4.8 | None | SRR1173706 | Other | lineage4.9 | None | SRR11349164 | MDR-TB | lineage2.2.2 | None | SRR1181223 | Other | lineage4.9 | None | SRR1208763 | Other | lineage4.9 | None | SRR7131030 | Other | lineage4.1.2.1 | None | ERR3559275 | HR-TB | lineage4.2.2 | None | ERR4769423 | Other | La1.3 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR15276982 | XDR-TB | lineage3 | None | SRR1180111 | Other | lineage4.9 | None | ERR3559276 | HR-TB | lineage4.2.2 | None | ERR4812763 | Other | lineage2.2.1 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | ERR2027250 | Other | lineage3.1.2 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4817131 | Other | lineage3.1.3;lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR473368 | Sensitive | lineage4.3.4.1 | None | ERR4769418 | Other | La1.2 | None | ERR4818050 | Sensitive | lineage4.6.2.2 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR4815118 | Other | lineage2.2.2 | None | ERR4820723 | Other | lineage4.4.1.1 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR4818126 | Other | lineage1 | None | ERR4818691 | Other | lineage4.8 | None | ERR4820829 | Other | lineage4.8 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR3077969 | Other | La1.3 | None | SRR7069128 | Other | lineage1.2.1.2.1 | None | ERR5865343 | MDR-TB | lineage2.2.1 | None | SRR1183067 | Other | lineage4.9 | None | ERR2228890 | Other | lineage4.8;lineage4.9 | None | ERR2229204 | Other | lineage4.8 | None | ERR4769453 | Other | La1.3 | None | ERR2179816 | Sensitive | lineage4 | None | SRR3675582 | Other | lineage4.9 | None | ERR7801177 | Other | lineage4.3.4.2.1 | None | SRR11342689 | Other | lineage4.1.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6044841 | Other | lineage4.9 | None | ERR2228815 | Other | lineage4.8 | None | ERR4817189 | Other | lineage4.7 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4820318 | Other | lineage4.2.2 | None | ERR978760 | RR-TB | lineage4.8 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR1173025 | Other | lineage4.9 | None | ERR9786810 | Sensitive | lineage4.1.2.1 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | SRR7069797 | Sensitive | lineage3 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR11342656 | MDR-TB | lineage2.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR2010514 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349209 | MDR-TB | lineage4.1.2.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR6397575 | Other | lineage4.3.4.2.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR779680 | Sensitive | lineage4.3.4.2.1 | None | SRR1183322 | Other | lineage4.9 | None | SRR7070176 | Other | lineage3 | None | SRR7070266 | Other | lineage1.1.2 | None | ERR867542 | HR-TB | lineage4.3 | None | ERR11466014 | Sensitive | lineage4.3.4.2.1 | None | SRR1183224 | Other | lineage4.9 | None | SRR7069957 | Sensitive | lineage4.1.2.1 | None | SRR7070419 | Other | lineage3 | None | SRR7645895 | Other | lineage2.2.1 | None | SRR6045928 | Other | lineage4.9 | None | SRR1181377 | Other | lineage4.9 | None | SRR1183175 | Other | lineage4.9 | None | SRR1180192 | Other | lineage4.9 | None | ERR10796583 | Other | lineage2.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342646 | HR-TB | lineage3 | None | ERR10796580 | Other | lineage4 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | ERR2229366 | Other | lineage4.8 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | SRR12062551 | Pre-XDR-TB | lineage2.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR19303815 | Other | lineage4.8 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR10796634 | Other | lineage4.7 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR7070388 | Other | lineage3.1.2 | None | SRR1183410 | Other | lineage4.9 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR867575 | Other | lineage4.9 | None | SRR22048474 | RR-TB | lineage4.8 | None | SRR7070469 | Other | lineage4.3.1.1 | None | ERR4818272 | Other | lineage4.3.2 | None | SRR7070369 | Other | lineage1.2.2.2 | None | SRR1181161 | Other | lineage4.9 | None | SRR1182992 | Other | lineage4.9 | None | SRR1180774 | Other | lineage4.9 | None | SRR1209000 | Other | lineage4.9 | None | ERR4819423 | Other | lineage4.6.2.2 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR867574 | Other | lineage4.9 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR5153833 | Other | lineage2.2.1 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131147 | Other | lineage4.1.2.1 | None | ERR6197030 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR2228838 | Other | lineage4.8 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR037504 | Other | lineage4.9.1 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR5153236 | MDR-TB | lineage2.2.1 | None | ERR978762 | Other | lineage4.8 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR2229540 | Sensitive | lineage4.8 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR037529 | Other | lineage4.3.4.2.1 | None | SRR5007186 | Sensitive | lineage4.6 | None | ERR4816967 | Other | lineage5 | None | ERR4818988 | Other | lineage1 | None | ERR036225 | Other | lineage4.3.4.2.1 | None | SRR1180686 | Other | lineage4.9 | None | SRR1183678 | Other | lineage4.9 | None | SRR1208891 | Other | lineage4.9 | None | SRR1208965 | Other | lineage4.9 | None | SRR1183327 | Other | lineage4.9 | None | SRR7131296 | Other | lineage4.3.3 | None | ERR4814507 | Other | lineage2.2.1 | None | ERR4769479 | Other | La1.3 | None | ERR10796615 | Other | lineage4.3.3;lineage4.9 | None | SRR3675389 | Other | lineage4.9 | None | ERR163952 | Sensitive | lineage1.1.3.2 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR2179850 | Sensitive | lineage4 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4821477 | Other | lineage4.8 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820290 | Other | lineage3 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SRR6982141 | Other | lineage4.3.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR6140667 | Other | La1.8.2 | None | ERR6198389 | Other | La1.2 | None | SRR7069193 | Other | lineage4.3.1.1 | None | ERR911930 | Other | lineage4.8 | None | ERR4815517 | Other | lineage1.2.2.2 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SRR6397770 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR1183616 | Other | lineage4.9 | None | ERR4814841 | Other | lineage4.1 | None | SRR7070230 | Other | lineage2.2.1.2 | None | SRR7070479 | Other | lineage4.1.2 | None | SRR1182878 | Other | lineage4.9 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | ERR4863405 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4817874 | Other | lineage3 | None | ERR4819772 | Other | lineage1.1.3.1 | None | ERR10796595 | Other | lineage4.9 | None | SRR7070329 | Other | lineage3 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9787033 | Sensitive | lineage6 | None | SRR18003035 | Other | La1.8.1 | None | SRR1208423 | Sensitive | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR1183197 | Other | lineage4.9 | None | SRR7069030 | Other | lineage3 | None | SRR11349208 | MDR-TB | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR7801178 | Other | lineage4.3.4.2.1 | None | SRR1181250 | Other | lineage4.9 | None | SRR6832659 | Other | lineage4.2.1 | None | ERR6397161 | Other | lineage4.2.2.2 | None | SRR6046359 | Other | lineage4.7 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR7069137 | Other | lineage4.8 | None | SRR16278274 | Other | La1.4 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131185 | Other | lineage4.1.2.1 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR2229541 | Other | lineage4.8 | None | SRR7755652 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR11349153 | RR-TB | lineage4.1.1.1 | None | SRR1791940 | Other | La1.8.1 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR9117725 | Other | lineage4.1.1.1 | None | ERR036215 | Other | lineage4.8 | None | ERR11465626 | Sensitive | lineage4.3.4.2.1 | None | ERR2229358 | Other | lineage4.8 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR5341460 | Other | lineage3 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR4814976 | Other | lineage4.9 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819641 | Other | lineage4.6.2.2 | None | SRR18002926 | Other | lineage2.2.1 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR1180647 | Other | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | SRR18002945 | Other | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR5007178 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR1183193 | Other | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR2228859 | Other | lineage4.8 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR6045705 | Other | lineage4.9 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6152886 | HR-TB | lineage3 | None | SRR6397389 | Sensitive | lineage4.1.2.1 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR9117747 | Sensitive | lineage4.8 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR8073606 | Other | La1.8.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR7645827 | Other | lineage4.2.1.1 | None | SRR7851312 | Other | La1.2 | None | SRR1180617 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR5818622 | Sensitive | lineage4.2.2.2 | None | SRR1048861 | Pre-XDR-TB | lineage2.2.2 | None | SRR9971032 | RR-TB | lineage2.2.1 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR7068998 | Sensitive | lineage3.1.3 | None | ERR4814623 | Sensitive | lineage4.8 | None | SRR6046020 | Other | lineage3 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046442 | Other | lineage3 | None | ERR4819982 | Sensitive | lineage2.2.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971223 | Other | lineage2.2.1 | None | SRR1183686 | Sensitive | lineage4.9 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR978735 | Other | lineage4.8 | None | SRR1180125 | Other | lineage4.9 | None | SRR6045289 | Other | lineage2.2;lineage4.9 | None | SRR1013561 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180672 | Other | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR7646014 | MDR-TB | lineage4.2.1 | None | SRR6046737 | Other | lineage4.9 | None | SRR7069959 | Other | lineage4.5 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | ERR9117760 | HR-TB | lineage4.3 | None | SRR6045910 | Sensitive | lineage3.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4816464 | Other | lineage3 | None | SRR19303899 | Other | lineage3 | None | ERR10796576 | Sensitive | lineage4.9 | None | SRR1180100 | Other | lineage4.9 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR10869285 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180046 | Other | lineage4.9 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR1183121 | Other | lineage4.9 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR2229148 | Other | lineage4.8 | dk | SRR7068971 | Sensitive | lineage3 | None | ERR3283008 | Other | lineage4.9 | None | SRR13591410 | Other | lineage4.9 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR5007170 | Other | lineage4.9 | None | ERR017781 | Other | lineage3 | None | ERR4818952 | Sensitive | lineage3 | None | SRR1208530 | Other | lineage4.9 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR1180503 | Other | lineage4.9 | None | SRR1183277 | Other | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR7069671 | HR-TB | lineage3 | None | SRR7069839 | Other | lineage4.8 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | ERR867544 | Other | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR978727 | Other | lineage4.8 | None | SRR7068876 | Other | lineage4.8 | None | SRR7645974 | Other | lineage4.3.4.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18213736 | Other | lineage3 | None | SRR19304089 | Sensitive | lineage4.8 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | SRR1180482 | Other | lineage4.9 | None | SRR9971017 | HR-TB | lineage2.2.1 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR10796560 | Other | lineage4.9 | None | SRR1202612 | Sensitive | lineage4.9 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4818964 | Other | lineage1.2.1.2.1 | None | SRR11567803 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283046 | Sensitive | lineage4.9 | None | SRR11342680 | Other | lineage4.8 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR11972438 | Sensitive | lineage1.1.1 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR10796630 | Other | lineage6.2.3 | None | ERR1199001 | Sensitive | lineage4.6.1.1 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR2228910 | Other | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR10796565 | Other | lineage4.9 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR1184012 | Other | lineage4.1.1.3 | None | SRR7069347 | Other | lineage4.1.2.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR2229033 | Other | lineage4.8 | None | ERR773806 | Sensitive | lineage2.2.1 | None | SRR1180062 | Other | lineage4.9 | None | SRR1182927 | Other | lineage4.9 | None | SRR1238559 | Other | lineage4.9 | None | ERR4819017 | Other | lineage3 | None | SRR19303949 | Other | lineage4.3.3 | None | SRR5818572 | Sensitive | lineage4.2.2.2 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | ERR5311077 | Other | La1.8.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18213726 | Other | lineage3 | None | SRR18003052 | Other | lineage2.2.1.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | SRR6045778 | Other | lineage3.1 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6045986 | Other | lineage3 | None | SRR6152910 | Sensitive | lineage1.2.1.2.1 | None | SRR4034391 | MDR-TB | lineage4.1.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR978747 | Other | lineage4.8 | None | SRR19303907 | Other | lineage4.8 | None | SRR19303876 | Other | lineage4.7 | None | SRR19304094 | Other | lineage6 | None | ERR2228899 | Other | lineage4.8 | None | ERR3468488 | Other | La1.8.1 | None | SRR1208798 | Other | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4818831 | Other | lineage3 | None | ERR6336784 | Sensitive | lineage1.2.1.2 | None | SRR6046250 | Other | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR6045743 | Other | lineage3 | None | SRR6046159 | Other | lineage4.8.2 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | SRR7645834 | Other | lineage2.2.1 | None | SRR6397642 | Other | lineage4.4.1.1 | None | SRR6397771 | Other | lineage1.1.1.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR6856091 | Sensitive | lineage4.1.1.3 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR1181580 | Other | lineage4.9 | None | SRR9971185 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR3283043 | Other | lineage4.9 | None | SRR1183080 | Other | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR9971200 | MDR-TB | lineage4.3.2 | None | SRR1182912 | Other | lineage4.9 | None | ERR10796568 | Other | lineage4.9 | None | SRR5818612 | Other | lineage4.2.2.2 | None | SRR6045485 | Other | lineage4.9 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR6397396 | HR-TB | lineage1.2.1.2.1 | None | SRR6397548 | HR-TB | lineage1.2.1.2.1 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR9971144 | RR-TB | lineage2.2.1 | None | SRR1183091 | Other | lineage4.9 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR2101643 | Other | lineage2.2.1 | None | ERR4818128 | Other | lineage4.1.2.1 | None | ERR2228965 | Other | lineage4.8 | None | SRR1181303 | Other | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | SRR3675527 | Other | lineage4.9 | None | ERR2229147 | Other | lineage4.8 | None | SRR1208657 | Sensitive | lineage4.9 | None | SRR1181130 | Other | lineage4.1.1.3 | None | SRR1183282 | Other | lineage4.9 | None | SRR6045384 | Other | lineage4.1.2.1 | None | SRR1208539 | Sensitive | lineage4.9 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR1172808 | Other | lineage4.9 | None | SRR1183360 | Other | lineage4.9 | None | SRR1182928 | Other | lineage4.9 | None | SRR8600288 | Other | La1.8.1 | None | SRR7131275 | Other | lineage4.1.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR7070134 | Other | lineage3.1.1 | None | ERR4817060 | Other | None | SRR7069760 | Other | lineage3 | None | SRR10808730 | Other | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR1181277 | Other | lineage4.9 | None | SRR1183511 | Other | lineage4.9 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR2229336 | Other | lineage4.8 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR7070458 | Sensitive | lineage3 | None | SRR1180025 | Other | lineage4.9 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR12882020 | Other | lineage3.1.1 | None | ERR4821325 | Other | lineage3 | None | SRR7131233 | MDR-TB | lineage4.3.3 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR2228810 | Other | lineage4.8;lineage4.9 | None | ERR2600613 | Sensitive | lineage4.8 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR1183190 | Other | lineage4.9 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR7069314 | Other | lineage3 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR1208196 | Sensitive | lineage4.9 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796591 | Other | lineage4.9 | None | ERR978751 | Other | lineage4.8 | None | ERR4819314 | Other | lineage1.1.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR560438 | Other | lineage4.9 | None | ERR978750 | RR-TB | lineage4.8 | None | SRR1180020 | Other | lineage4.9 | None | ERR4820151 | Other | lineage4.8 | None | ERR3559282 | HR-TB | lineage4.2.2 | None | SRR6044936 | Other | lineage4.6 | None | SRR6152979 | Other | lineage4.7 | None | SRR7068875 | Other | lineage3.1.2.2 | None | ERR978733 | RR-TB | lineage4.8 | None | ERR405190 | Sensitive | lineage4.9 | None | SRR1183314 | Other | lineage4.9 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR10796562 | Other | lineage4.3.4.1 | None | SRR1183358 | Other | lineage4.9 | None | SRR7131104 | HR-TB | lineage4.3.4.2 | None | SRR7755695 | MDR-TB | lineage2.2.1 | None | ERR9117812 | Other | lineage4.3.1.1 | None | SRR7070223 | HR-TB | lineage3 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR1208557 | Other | lineage4.9 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | SRR1183168 | Other | lineage4.9 | None | SRR1208559 | Other | lineage4.9 | None | ERR405191 | Sensitive | lineage4.9 | None | SRR1183133 | Other | lineage4.9 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR1183684 | Other | lineage4.9 | None | ERR027451 | Pre-XDR-TB | lineage2.2.1 | ru | SRR7131236 | Other | lineage4.3.4.2 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR12420587 | MDR-TB | lineage2.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | ERR6197040 | Other | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR2027230 | Other | lineage4.2.2.2 | None | ERR4817434 | Other | lineage3 | None | ERR4818407 | Other | lineage4.3.2 | None | SRR22424905 | RR-TB | lineage4.9 | None | SRR6389899 | Other | lineage4.1.2 | None | SRR6044904 | Other | lineage3 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR6046246 | Other | lineage3 | None | ERR1034692 | Other | lineage1.2.1.2.1 | None | ERR2228900 | Other | lineage4.8 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR5341429 | HR-TB | lineage3.1.2.1 | None | SRR7069648 | Other | lineage4.6.2.2 | None | SRR6982053 | Sensitive | lineage4.3;lineage4.9.1 | None | SRR7236330 | Other | La1.8.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR1181392 | Other | lineage4.9 | None | ERR4817584 | Other | lineage3;lineage4.9 | None | SRR1183341 | Other | lineage4.9 | None | ERR9901813 | Sensitive | lineage4.1.4 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | SRR7070482 | Other | lineage4.1.2.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR5341288 | Pre-XDR-TB | lineage3 | None | SRR6045295 | Other | lineage4.7 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6153150 | Other | lineage3.1.1 | None | SRR1180024 | Other | lineage4.9 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181592 | Other | lineage4.9 | None | ERR11465627 | Sensitive | lineage4.3.4.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7070154 | Other | lineage4.4.1.1 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR10796553 | Other | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6397441 | Other | lineage4.5 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | SRR1183388 | Other | lineage4.9 | None | SRR1183472 | Other | lineage4.9 | None | SRR1184383 | Other | lineage4.9 | None | ERR502517 | Other | lineage5.1.1 | None | ERR4814617 | Other | lineage1.1.3.1 | None | SRR1208476 | Other | lineage4.9 | None | SRR1183354 | Other | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR7070153 | Sensitive | lineage4.1.2.1 | None | ERR10796598 | Other | lineage4.9 | None | ERR4821572 | Sensitive | lineage2.1 | None | SRR7069258 | HR-TB | lineage3 | None | SRR7131234 | Other | lineage4.9 | None | SRR7070515 | Other | lineage1.1.3.1 | None | SRR7070602 | Other | lineage4.2.1 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR2229811 | Other | lineage4.8 | dk | ERR4821054 | Sensitive | lineage3 | None | SRR7070165 | Other | lineage4.1.2.1 | None | ERR978754 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796577 | Other | lineage4.9 | None | SRR1180455 | Other | lineage4.9 | None | SRR6044993 | Other | lineage3 | None | SRR7070144 | Other | lineage4.8 | None | SRR1183170 | Other | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR7068927 | Other | lineage1.2.2.2 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4821288 | Other | lineage4.7 | None | ERR987733 | Other | lineage4.6.1.1 | None | SRR6046087 | Sensitive | lineage4.9 | None | SRR1180495 | Other | lineage4.9 | None | SRR11342695 | MDR-TB | lineage4.8 | None | SRR6046291 | Other | lineage3 | None | SRR6046766 | Other | lineage3.1.1 | None | ERR10796635 | Other | lineage4.8 | None | SRR6046729 | Other | lineage3 | None | SRR1183192 | Other | lineage4.9 | None | SRR7069391 | Other | lineage4.9 | None | ERR4814312 | Other | lineage4 | None | ERR978694 | Other | lineage4.8 | None | ERR9811805 | MDR-TB | lineage4.8 | None | SRR1183402 | Other | lineage4.9 | None | ERR10796599 | Other | lineage4.8 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR1183214 | Other | lineage4.9 | None | SRR1183375 | Other | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR1208925 | Other | lineage4.9 | None | SRR6397727 | Other | lineage4.2.1.1 | None | SRR7645924 | Pre-XDR-TB | lineage4.2.1 | None | ERR4815268 | Sensitive | lineage4.8 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR6201843 | Other | La1.2 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR023487 | RR-TB | lineage2.2.1 | None | ERR4817398 | Other | lineage3.1.1 | None | SRR19303805 | Sensitive | lineage4.8 | None | ERR2229733 | Other | lineage4.8 | dk | ERR4821286 | Other | lineage4.8 | None | ERR2228888 | Other | lineage4.8 | None | ERR4816322 | Other | lineage4.9 | None | SRR1183726 | Sensitive | lineage4.9 | None | SRR1183524 | Other | lineage4.9 | None | SRR1202410 | Other | lineage4.9 | None | SRR7645928 | Other | lineage4.7 | None | ERR4820324 | Other | lineage4 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | ERR4815777 | Other | lineage4.9 | None | SRR9971220 | RR-TB | lineage2.2.1 | None | ERR4819593 | Sensitive | lineage4.5 | None | SRR21728339 | Other | lineage3 | None | SRR1180486 | Other | lineage4.9 | None | SRR6153036 | Other | lineage1.2.1.2.1;lineage4.9 | None | SRR7070665 | HR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR5007165 | Other | lineage3 | None | SRR1202520 | Sensitive | lineage4.9 | None | ERR978761 | Other | lineage4.8 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR9117763 | HR-TB | lineage3 | None | ERR387051 | Other | lineage4.9 | None | SRR6046815 | Other | lineage3 | None | SRR1180687 | Other | lineage4.9 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR1182923 | Other | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR1202408 | Other | lineage4.9 | None | SRR1181147 | Other | lineage4.9 | None | SRR1202450 | Sensitive | lineage4.9 | None | SRR3675565 | Other | lineage4 | None | SRR1208878 | Sensitive | lineage4.9 | None | SRR1183665 | Other | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | ERR978726 | RR-TB | lineage4.8 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR6046208 | Other | lineage4.8 | None | SRR6045957 | Other | lineage4.9 | None | SRR1180241 | Other | lineage4.9 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR5007163 | Other | lineage3;lineage4.9 | None | SRR6046117 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR019855 | Other | lineage3 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR978756 | Other | lineage4.8 | None | SRR7131183 | MDR-TB | lineage2.2.1 | None | SRR6046210 | Other | lineage4.9 | None | SRR1202599 | Other | lineage4.9 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR7070461 | Other | lineage3 | None | SRR7070609 | Other | lineage4.2.2.2 | None | SRR7131123 | Other | lineage4.8 | None | SRR1183304 | Other | lineage4.9 | None | ERR2600609 | Other | lineage4.8 | None | SRR7068873 | Other | lineage4.8 | None | ERR3838816 | Sensitive | lineage4.1.1.3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR1183057 | Other | lineage4.9 | None | SRR1183321 | Other | lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR4820720 | Other | lineage4.1.2.1 | None | SRR1202713 | Sensitive | lineage4.9 | None | ERR2229436 | Other | lineage4.8 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR1208791 | Other | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR1180578 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR3675552 | Other | lineage4.9 | None | SRR2101691 | Other | lineage2.2.1 | None |
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