lineage | Count |
---|---|
lineage4.4.1.1 | 1 |
lineage4.9 | 36 |
lineage4.3.3 | 2 |
lineage2.2.1.1 | 4 |
lineage5.2 | 2 |
lineage2.2.1 | 9 |
lineage3 | 3 |
lineage4.1.2.1 | 5 |
lineage4.8.1 | 1 |
lineage2.2.1;lineage4 | 1 |
lineage3;lineage4 | 1 |
lineage4.1.1.1 | 1 |
lineage1.2.1.1 | 1 |
lineage5 | 1 |
lineage4.2.1 | 1 |
lineage4.4.1.2 | 1 |
lineage1.1.1.1 | 1 |
lineage3.1.3 | 1 |
lineage4.7 | 1 |
La3;M.canetti;lineage4.9 | 1 |
lineage4.2.2.2 | 1 |
lineage4.1.1.2 | 1 |
lineage4 | 1 |
La1.7;lineage4.9 | 1 |
M.canetti;lineage4.9 | 1 |
lineage4.6.1.1 | 1 |
lineage1.1.3.1 | 1 |
lineage3.1.1 | 1 |
lineage3.1.2.1 | 1 |
lineage1.1.1;lineage4 | 1 |
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
lineage4.4.1.1.1 | 1 |
M.canetti;lineage4.9;lineage9 | 1 |
lineage4.3.4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 88 |
ID | Drug resistance | Lineage | Country iso2 | ERR4819096 | Other | lineage4.4.1.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR3275190 | Other | lineage3 | nl | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2446509 | Other | lineage3 | nl | ERR4814734 | Other | lineage1.2.1.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR4816967 | Other | lineage5 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR2027233 | Sensitive | lineage4.1.2.1 | None | ERR736831 | Other | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | ERR1034791 | RR-TB | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR2446566 | Other | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | SRR7496471 | Sensitive | lineage4 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR6046737 | Other | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR2513259 | Other | lineage3 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR1063855 | Other | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None |
---|