Rv0668 - c.1332C>G
Drug resistance types
124 Sensitive
29 RR-TB
57 HR-TB
35 MDR-TB
16 Pre-XDR-TB
1 XDR-TB
93 Other
lineage Counts
| lineage | Count |
|---|---|
| 32 | |
| lineage4.6.1.2 | 7 |
| lineage4.1.2.1 | 10 |
| lineage4.9 | 80 |
| lineage4.5 | 1 |
| lineage4 | 59 |
| lineage4;lineage2 | 1 |
| lineage2.2.1 | 32 |
| lineage4.3.4.2 | 2 |
| lineage4.8 | 11 |
| lineage3.1.3 | 2 |
| lineage4.1 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.6.3 | 1 |
| lineage4.3.4.2.1 | 8 |
| lineage1.1.1 | 2 |
| lineage3 | 20 |
| lineage4.3.3 | 6 |
| lineage4.6.2.2 | 4 |
| lineage1.1.2 | 2 |
| lineage1.2.2.2 | 1 |
| La1.8.1 | 17 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage2.1 | 2 |
| lineage2.2.1.1 | 4 |
| lineage4.7 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 3 |
| lineage4.4.1.1.1 | 3 |
| lineage4.8.1 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.6.1.1 | 4 |
| La1.7.X-unk4 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.2 | 1 |
| La1.3 | 2 |
| La1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.3.4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage5.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.9;lineage2.2.1 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.6.1 | 1 |
| La1.6 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage2 | 1 |
| La1.4 | 1 |
| lineage3.1.1 | 1 |
| lineage4.4.1.1 | 1 |
| La1.7.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 355 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR192070 | Other | None | SAMN02381051 | RR-TB | lineage4.6.1.2 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR212125 | HR-TB | lineage4 | None | SRR3742667 | Sensitive | lineage4.9 | None | SRR5341384 | Sensitive | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR2513405 | Other | lineage2.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4819051 | Other | lineage4 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5341453 | Sensitive | None | ERR4817554 | Other | lineage1.1.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5341375 | Other | lineage4.9 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR5341387 | Other | lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341425 | Other | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820324 | Other | lineage4 | None | ERR2693237 | Other | lineage4.9 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341308 | Sensitive | lineage4 | None | ERR4820394 | Other | lineage4.3.4.2.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR2515032 | Other | lineage3 | None | ERR4820030 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR2747656 | Other | La1.8.1 | None | SRR6046210 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | ERR4821550 | Other | lineage2.2.1 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044780 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6046609 | Sensitive | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR4829238 | Sensitive | lineage3 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046737 | Other | lineage4.9 | None | SRR6046644 | HR-TB | None | SRR6511621 | HR-TB | None | SRR6046834 | Sensitive | lineage4.9 | None | SRR6046815 | Other | lineage3 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | SRR6981961 | Sensitive | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR323035 | Sensitive | lineage4.9 | None | SRR6981999 | Sensitive | lineage2.2.1 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR5311095 | Other | La1.8.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR5311087 | Other | La1.8.1 | None | ERR5311084 | Other | La1.8.1 | None | SRR7131160 | Sensitive | lineage3 | None | SRR7535082 | Sensitive | lineage4 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | ERR323108 | HR-TB | lineage4 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323045 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063896 | Sensitive | None | ERR10796564 | Other | lineage4.3.3 | None | ERR108471 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR323115 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR11465833 | Sensitive | lineage4.3.2.1 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3439265 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3468578 | Other | La1.8.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3445503 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3468615 | Other | La1.8.1 | None | ERR3468670 | Other | La1.8.1 | None | ERR3468655 | Other | La1.8.1 | None | ERR3468671 | Other | La1.8.1 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3468693 | Sensitive | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797067 | Other | La1.8.1 | None | ERR3468702 | Other | La1.8.1 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR400350 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4024991 | Other | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4627314 | HR-TB | La1.8.1 | None | ERR473279 | Other | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769436 | Other | La1.3 | None | ERR4769482 | Sensitive | La1 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797141 | Sensitive | lineage3 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR6358979 | Other | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6866022 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR8975534 | Sensitive | lineage4.3.4.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR751326 | Sensitive | lineage4 | None | ERR751345 | Other | lineage5.1.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR9634265 | Sensitive | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR9786076 | Sensitive | lineage3 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049672 | Other | lineage3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1062895 | Other | lineage4.6.1.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049752 | RR-TB | lineage4.6.1.2 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1062937 | HR-TB | lineage4.6.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342667 | MDR-TB | lineage4.3.3 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR1158918 | Sensitive | lineage4 | None | SRR11349133 | MDR-TB | lineage4.3.3 | None | SRR1140586 | HR-TB | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140736 | RR-TB | None | SRR1172717 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173740 | Other | None | SRR1173777 | Other | lineage4 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1180999 | Sensitive | lineage4.8 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | SRR14801749 | Sensitive | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR17567930 | Other | lineage4.4.1.1 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19303775 | Other | lineage3 | None | SRR19304064 | MDR-TB | lineage2.2.1 | None | SRR19303779 | Sensitive | lineage4.8 | None | SRR19303788 | Sensitive | lineage4.8 | None | SRR19303806 | Sensitive | lineage4.1.2.1 | None | SRR19303813 | HR-TB | lineage4.8 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4815310 | Other | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR4814639 | HR-TB | lineage4 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4815550 | Other | lineage4 | None | ERR176651 | HR-TB | None | ERR4815079 | RR-TB | lineage3 | None | ERR4814976 | Other | lineage4.9 | None | ERR181887 | HR-TB | None | SAMN02381005 | Other | lineage4.6.1.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815022 | Other | lineage3.1.2.1 | None |
|---|
