lineage | Count |
---|---|
23 | |
lineage4.6.2.2 | 2 |
La1.8.1 | 1 |
lineage4 | 30 |
lineage4.8 | 1 |
lineage2.1 | 1 |
lineage3.1.2.1 | 1 |
lineage4.5 | 1 |
lineage4.9 | 41 |
lineage4.3.4.2.1 | 2 |
lineage3 | 1 |
lineage4.9;lineage2.1 | 1 |
lineage2.2.1 | 5 |
lineage1.1.2 | 1 |
lineage4.1.2 | 1 |
lineage4.3.2.1 | 1 |
lineage4.4.1.2 | 1 |
lineage4.9;lineage2.2 | 1 |
lineage2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2 | 1 |
spoligotype | Count |
---|---|
None | 118 |
ID | Drug resistance | Lineage | Country iso2 | ERR4815310 | Other | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR3675234 | Other | None | SRR3675246 | Sensitive | lineage4 | None | ERR4814748 | Other | lineage4.8 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR4815550 | Other | lineage4 | None | ERR4816466 | HR-TB | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816548 | MDR-TB | lineage4.5 | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR5341453 | Sensitive | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341396 | Other | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341300 | Other | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693231 | Other | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR6046737 | Other | lineage4.9 | None | ERR2693257 | Other | None | ERR2693232 | Other | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR137286 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063896 | Sensitive | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3797017 | Other | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283032 | HR-TB | None | ERR3797014 | Other | None | ERR3283024 | Other | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR4796254 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR6866022 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR751326 | Sensitive | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None |
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