Rv0667 - c.1758G>C
Drug resistance types
99 Sensitive
7 RR-TB
88 HR-TB
13 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
103 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1 | 2 |
| lineage4.9 | 67 |
| lineage4 | 73 |
| 86 | |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1 | 26 |
| lineage4.1.1.3 | 1 |
| lineage4.3.4 | 2 |
| lineage4.5 | 3 |
| lineage2.1 | 1 |
| lineage4.1.2.1 | 6 |
| lineage5.1.4 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.2.1 | 3 |
| lineage4.8 | 1 |
| lineage1.1.1 | 2 |
| lineage4.3.3 | 1 |
| lineage3 | 6 |
| lineage1.1.3.1 | 1 |
| lineage1.1.2 | 1 |
| lineage5.2 | 2 |
| lineage2.2.1.1 | 5 |
| lineage4.6.2.2 | 4 |
| lineage2.2 | 7 |
| lineage4.2.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage5.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.9;La1.3 | 1 |
| La1.2 | 1 |
| La1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.8;lineage4.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.4 | 1 |
| La1.7.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 321 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR158583 | HR-TB | None | SRR3675502 | Other | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SAMN02585910 | Other | lineage2.2.1 | None | ERR3275450 | Other | lineage4 | None | ERR181744 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675234 | Other | None | ERR181824 | HR-TB | lineage4 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675279 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675387 | Sensitive | None | ERR176751 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675318 | Other | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675547 | Other | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212123 | Other | None | ERR212121 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR1035162 | Other | None | ERR245758 | Other | lineage4.9.1 | None | ERR4819051 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341418 | Other | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341396 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341456 | Other | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341293 | HR-TB | lineage4 | None | ERR1023509 | Other | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR2515228 | Other | lineage2.2.1 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341313 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | ERR2446382 | Other | lineage4 | None | SRR5341315 | Sensitive | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693230 | Other | None | ERR2693231 | Other | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045503 | HR-TB | None | SRR6044780 | Other | lineage4.9 | None | ERR4821550 | Other | lineage2.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR5535933 | HR-TB | None | SRR6045519 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6046152 | Other | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6046046 | Other | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046397 | Other | None | SRR6046245 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046482 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046492 | Other | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046644 | HR-TB | None | SRR6046737 | Other | lineage4.9 | None | SRR6046824 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046897 | Sensitive | lineage4 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6789628 | HR-TB | lineage4.9 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831638 | Sensitive | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6982365 | Other | lineage2.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR294266 | HR-TB | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR502943 | HR-TB | None | ERR502889 | Other | None | ERR323107 | Other | lineage4 | None | SRR7535086 | Other | None | ERR323045 | HR-TB | None | SRR9971114 | Other | lineage2.2.1 | None | ERR1063862 | HR-TB | None | ERR067681 | HR-TB | None | ERR1034634 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1063859 | HR-TB | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR108471 | HR-TB | lineage4 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR133986 | HR-TB | None | ERR3283024 | Other | None | ERR3283021 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3439432 | Other | None | ERR349264 | Sensitive | lineage4 | None | ERR3445503 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR363437 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3797046 | HR-TB | None | ERR369162 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797014 | Other | None | ERR3797043 | HR-TB | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR3797047 | HR-TB | lineage4 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3797061 | Other | None | ERR3797081 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4188247 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769452 | HR-TB | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4798431 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4798406 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358991 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR6359045 | HR-TB | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736835 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736837 | Other | lineage4.9 | None | ERR736839 | Other | None | ERR736848 | HR-TB | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | ERR752229 | Other | lineage4.5 | None | ERR736875 | HR-TB | lineage4 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119669 | HR-TB | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786843 | Other | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | SRR1173719 | HR-TB | lineage3 | None | SRR10808805 | Sensitive | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR990545 | Other | lineage3 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1173310 | MDR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1203934 | Sensitive | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR14782405 | HR-TB | None | SRR15244369 | Pre-XDR-TB | lineage4 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR17658565 | Other | lineage3 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None |
|---|
