Run ID: ERR2515228
Sample name:
Date: 31-03-2023 20:49:22
Number of reads: 440328
Percentage reads mapped: 94.42
Strain: lineage2.2.1
Drug-resistance: Other
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage2 | East-Asian | Beijing | RD105 | 0.98 |
lineage2.2 | East-Asian (Beijing) | Beijing-RD207 | RD105;RD207 | 1.0 |
lineage2.2.1 | East-Asian (Beijing) | Beijing-RD181 | RD105;RD207;RD181 | 0.99 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|---|---|---|---|---|
embB | 4247580 | p.Ala356Val | missense_variant | 0.12 | ethambutol |
embB | 4247663 | p.Tyr384Asn | missense_variant | 0.14 | ethambutol |
embB | 4247676 | p.Ala388Gly | missense_variant | 0.14 | ethambutol |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 |
gyrA | 7496 | c.195C>T | synonymous_variant | 0.12 |
gyrA | 7585 | p.Ser95Thr | missense_variant | 1.0 |
gyrA | 9029 | c.1728T>C | synonymous_variant | 0.14 |
gyrA | 9035 | c.1734G>A | synonymous_variant | 0.12 |
gyrA | 9051 | c.1750_1752delTTGinsCTT | synonymous_variant | 0.14 |
gyrA | 9056 | c.1755C>G | synonymous_variant | 0.14 |
gyrA | 9065 | c.1764C>G | synonymous_variant | 0.12 |
gyrA | 9074 | c.1773G>T | synonymous_variant | 0.12 |
gyrA | 9080 | c.1779G>T | synonymous_variant | 0.12 |
gyrA | 9089 | c.1788G>C | synonymous_variant | 0.12 |
gyrA | 9092 | c.1791C>G | synonymous_variant | 0.12 |
gyrA | 9101 | c.1800A>G | synonymous_variant | 0.12 |
gyrA | 9107 | c.1806C>T | synonymous_variant | 0.12 |
gyrA | 9304 | p.Gly668Asp | missense_variant | 1.0 |
fgd1 | 490889 | p.Thr36Ser | missense_variant | 0.12 |
fgd1 | 491742 | c.960T>C | synonymous_variant | 1.0 |
mshA | 575907 | p.Ala187Val | missense_variant | 1.0 |
ccsA | 620625 | p.Ile245Met | missense_variant | 1.0 |
rpoB | 760925 | c.1119T>C | synonymous_variant | 0.13 |
rpoB | 760928 | c.1122G>C | synonymous_variant | 0.14 |
rpoB | 760946 | c.1140A>G | synonymous_variant | 0.14 |
rpoB | 760973 | c.1167G>C | synonymous_variant | 0.13 |
rpoB | 760982 | c.1176G>C | synonymous_variant | 0.15 |
rpoB | 760991 | c.1185G>C | synonymous_variant | 0.15 |
rpoB | 761006 | c.1200C>G | synonymous_variant | 0.13 |
rpoB | 761015 | c.1209G>C | synonymous_variant | 0.17 |
rpoB | 761021 | c.1215G>A | synonymous_variant | 0.13 |
rpoB | 761027 | c.1221A>G | synonymous_variant | 0.13 |
rpoB | 761036 | c.1230G>C | synonymous_variant | 0.13 |
rpoB | 761510 | c.1704T>A | synonymous_variant | 0.12 |
rpoB | 761531 | c.1725C>G | synonymous_variant | 0.19 |
rpoB | 761537 | c.1731C>G | synonymous_variant | 0.19 |
rpoB | 761561 | c.1755C>G | synonymous_variant | 0.22 |
rpoB | 761564 | c.1758G>C | synonymous_variant | 0.22 |
rpoB | 761570 | c.1764T>C | synonymous_variant | 0.24 |
rpoB | 761573 | c.1767C>G | synonymous_variant | 0.21 |
rpoB | 761579 | c.1773G>C | synonymous_variant | 0.21 |
rpoB | 761606 | c.1800C>G | synonymous_variant | 0.23 |
rpoB | 761612 | c.1806G>T | synonymous_variant | 0.21 |
rpoB | 761615 | c.1809A>C | synonymous_variant | 0.21 |
rpoB | 761636 | c.1830G>T | synonymous_variant | 0.19 |
rpoB | 761645 | c.1839C>G | synonymous_variant | 0.19 |
rpoB | 761648 | c.1842T>C | synonymous_variant | 0.19 |
rpoB | 761657 | c.1851C>G | synonymous_variant | 0.19 |
rpoB | 761669 | c.1863C>T | synonymous_variant | 0.21 |
rpoB | 761675 | c.1869G>C | synonymous_variant | 0.21 |
rpoB | 761711 | c.1905C>G | synonymous_variant | 0.23 |
rpoB | 761717 | c.1911C>G | synonymous_variant | 0.23 |
rpoB | 761735 | c.1929C>G | synonymous_variant | 0.26 |
rpoB | 761747 | c.1941G>C | synonymous_variant | 0.24 |
rpoB | 761765 | c.1959T>C | synonymous_variant | 0.19 |
rpoB | 761772 | p.His656Ala | missense_variant | 0.19 |
rpoB | 761778 | p.Asn658Asp | missense_variant | 0.18 |
rpoB | 761791 | p.Arg662His | missense_variant | 0.17 |
rpoB | 761815 | p.Ala670Glu | missense_variant | 0.12 |
rpoC | 762758 | c.-612G>C | upstream_gene_variant | 0.12 |
rpoC | 762776 | c.-594C>T | upstream_gene_variant | 0.13 |
rpoB | 762785 | p.Asp993Glu | missense_variant | 0.14 |
rpoC | 762788 | c.-582G>C | upstream_gene_variant | 0.15 |
rpoB | 762789 | p.Leu995Met | missense_variant | 0.14 |
rpoB | 762799 | p.Ala998Gly | missense_variant | 0.14 |
rpoC | 762812 | c.-558C>G | upstream_gene_variant | 0.12 |
rpoB | 762813 | p.Met1003Val | missense_variant | 0.13 |
rpoC | 762818 | c.-552C>G | upstream_gene_variant | 0.13 |
rpoC | 762824 | c.-546C>T | upstream_gene_variant | 0.14 |
rpoC | 762827 | c.-543G>C | upstream_gene_variant | 0.15 |
rpoC | 762836 | c.-534C>T | upstream_gene_variant | 0.15 |
rpoC | 762857 | c.-513C>G | upstream_gene_variant | 0.21 |
rpoC | 762860 | c.-510G>C | upstream_gene_variant | 0.21 |
rpoC | 762863 | c.-507T>C | upstream_gene_variant | 0.21 |
rpoC | 762899 | c.-471G>C | upstream_gene_variant | 0.24 |
rpoC | 762902 | c.-468C>T | upstream_gene_variant | 0.15 |
rpoC | 762929 | c.-441G>C | upstream_gene_variant | 0.14 |
rpoC | 762932 | c.-438G>T | upstream_gene_variant | 0.14 |
rpoC | 762947 | c.-423C>G | upstream_gene_variant | 0.14 |
rpoC | 762962 | c.-408C>T | upstream_gene_variant | 0.13 |
rpoC | 762983 | c.-387C>T | upstream_gene_variant | 0.13 |
rpoC | 762989 | c.-381G>C | upstream_gene_variant | 0.14 |
rpoC | 763028 | c.-342T>C | upstream_gene_variant | 0.18 |
rpoC | 763031 | c.-339T>C | upstream_gene_variant | 1.0 |
rpoC | 763034 | c.-336C>G | upstream_gene_variant | 0.17 |
rpoC | 763040 | c.-330C>G | upstream_gene_variant | 0.15 |
rpoC | 764809 | c.1440C>T | synonymous_variant | 0.17 |
rpoC | 764815 | c.1446A>G | synonymous_variant | 0.14 |
rpoC | 764827 | c.1458G>C | synonymous_variant | 0.21 |
rpoC | 764854 | c.1485G>T | synonymous_variant | 0.24 |
rpoC | 764858 | c.1489T>C | synonymous_variant | 0.25 |
rpoC | 764888 | c.1519T>C | synonymous_variant | 0.28 |
rpoC | 764932 | c.1563C>G | synonymous_variant | 0.25 |
rpoC | 764935 | c.1566T>C | synonymous_variant | 0.25 |
rpoC | 764948 | c.1579T>C | synonymous_variant | 0.23 |
rpoC | 764968 | c.1599T>C | synonymous_variant | 0.26 |
rpoC | 764995 | c.1626C>G | synonymous_variant | 0.17 |
rpoC | 765019 | c.1650A>G | synonymous_variant | 0.15 |
rpoC | 765034 | c.1665T>C | synonymous_variant | 0.16 |
rpoC | 765040 | c.1671T>C | synonymous_variant | 0.16 |
rpoC | 765041 | c.1672T>C | synonymous_variant | 0.16 |
rpoC | 765047 | c.1678T>C | synonymous_variant | 0.16 |
rpoC | 765052 | c.1683C>G | synonymous_variant | 0.15 |
rpoC | 765055 | c.1686C>G | synonymous_variant | 0.16 |
rpoC | 765073 | c.1704G>C | synonymous_variant | 0.17 |
rpoC | 765076 | c.1707A>G | synonymous_variant | 0.17 |
rpoC | 765079 | c.1710T>G | synonymous_variant | 0.17 |
rpoC | 765082 | c.1713G>C | synonymous_variant | 0.16 |
rpoC | 765085 | c.1716T>C | synonymous_variant | 0.16 |
rpoC | 765089 | c.1720T>C | synonymous_variant | 0.16 |
rpoC | 765103 | c.1734G>T | synonymous_variant | 0.12 |
rpoC | 765121 | c.1752G>T | synonymous_variant | 0.12 |
rpoC | 765132 | c.1764_1765delGA | frameshift_variant | 0.15 |
rpoC | 765445 | c.2076G>C | synonymous_variant | 0.14 |
rpoC | 765451 | c.2082C>G | synonymous_variant | 0.14 |
rpoC | 765452 | p.Ala695Ser | missense_variant | 0.14 |
rpoC | 765466 | c.2097C>T | synonymous_variant | 0.14 |
rpoC | 765478 | c.2109T>C | synonymous_variant | 0.14 |
rpoC | 765499 | c.2130C>T | synonymous_variant | 0.14 |
rpoC | 765505 | c.2136C>T | synonymous_variant | 0.15 |
rpoC | 765508 | c.2139C>G | synonymous_variant | 0.18 |
rpoC | 765529 | c.2160C>T | synonymous_variant | 0.14 |
rpoC | 765553 | c.2184C>T | synonymous_variant | 0.12 |
rpoC | 765556 | c.2187G>C | synonymous_variant | 0.12 |
rpoC | 765580 | c.2211G>C | synonymous_variant | 0.17 |
rpoC | 765583 | c.2214G>C | synonymous_variant | 0.17 |
rpoC | 765613 | p.His748Gln | missense_variant | 0.19 |
rpoC | 765625 | c.2256C>G | synonymous_variant | 0.14 |
rpoC | 765628 | c.2259G>C | synonymous_variant | 0.14 |
rpoC | 765631 | p.Asp754Glu | missense_variant | 0.14 |
rpoC | 765658 | c.2289C>T | synonymous_variant | 0.15 |
rpoC | 765700 | c.2331T>C | synonymous_variant | 0.15 |
rpoC | 765734 | c.2365T>C | synonymous_variant | 0.15 |
rpoC | 765739 | c.2370G>T | synonymous_variant | 0.16 |
rpoC | 765751 | c.2382C>G | synonymous_variant | 0.16 |
rpoC | 765753 | p.Asp795Ala | missense_variant | 0.16 |
rpoC | 765772 | c.2403C>G | synonymous_variant | 0.17 |
rpoC | 765784 | c.2415C>G | synonymous_variant | 0.18 |
rpoC | 765793 | c.2424C>G | synonymous_variant | 0.17 |
rpoC | 765796 | c.2427C>T | synonymous_variant | 0.17 |
rpoC | 765811 | c.2442T>G | synonymous_variant | 0.13 |
rpoC | 766426 | c.3057C>T | synonymous_variant | 0.18 |
rpoC | 766447 | c.3078T>C | synonymous_variant | 0.13 |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 |
mmpL5 | 776100 | p.Thr794Ile | missense_variant | 1.0 |
mmpL5 | 776182 | p.Asp767Asn | missense_variant | 1.0 |
mmpS5 | 779615 | c.-710C>G | upstream_gene_variant | 1.0 |
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 |
rplC | 800738 | c.-71T>C | upstream_gene_variant | 0.16 |
rplC | 800747 | c.-62C>G | upstream_gene_variant | 0.17 |
rplC | 800771 | c.-38C>T | upstream_gene_variant | 0.16 |
rplC | 800806 | c.-3G>C | upstream_gene_variant | 0.13 |
rplC | 800807 | c.-2C>T | upstream_gene_variant | 0.13 |
rplC | 800808 | c.-1A>C | upstream_gene_variant | 0.13 |
rplC | 800815 | c.7C>A | synonymous_variant | 0.14 |
rplC | 800820 | c.12G>A | synonymous_variant | 0.13 |
rplC | 800829 | c.21C>G | synonymous_variant | 0.12 |
rplC | 800844 | c.36T>C | synonymous_variant | 0.12 |
rplC | 800856 | c.48A>G | synonymous_variant | 0.14 |
rplC | 800865 | c.57A>G | synonymous_variant | 0.13 |
rplC | 800867 | p.Ser20Asn | missense_variant | 0.13 |
fbiC | 1304835 | c.1905G>C | synonymous_variant | 0.25 |
fbiC | 1304844 | c.1914C>A | synonymous_variant | 1.0 |
fbiC | 1304847 | c.1917C>G | synonymous_variant | 1.0 |
fbiC | 1304853 | c.1923C>G | synonymous_variant | 1.0 |
fbiC | 1304869 | c.1939C>T | synonymous_variant | 0.15 |
fbiC | 1304893 | p.Gly655Ser | missense_variant | 0.15 |
fbiC | 1304901 | c.1971C>A | synonymous_variant | 0.17 |
fbiC | 1304904 | c.1974G>A | synonymous_variant | 0.15 |
fbiC | 1304907 | c.1977C>G | synonymous_variant | 0.15 |
fbiC | 1304910 | c.1980G>C | synonymous_variant | 0.15 |
fbiC | 1304916 | c.1986T>C | synonymous_variant | 0.15 |
fbiC | 1304925 | c.1995G>C | synonymous_variant | 0.17 |
fbiC | 1304928 | c.1998T>C | synonymous_variant | 0.17 |
fbiC | 1304934 | c.2004C>A | synonymous_variant | 0.18 |
fbiC | 1304937 | c.2007G>C | synonymous_variant | 0.18 |
fbiC | 1304943 | c.2013C>T | synonymous_variant | 0.18 |
fbiC | 1304944 | c.2014C>T | synonymous_variant | 0.18 |
fbiC | 1304955 | c.2025G>A | synonymous_variant | 0.18 |
fbiC | 1304958 | c.2028T>G | synonymous_variant | 0.18 |
fbiC | 1304967 | c.2037G>C | synonymous_variant | 0.18 |
fbiC | 1304970 | c.2040G>C | synonymous_variant | 0.18 |
fbiC | 1304991 | c.2061G>A | synonymous_variant | 0.14 |
fbiC | 1304995 | c.2065T>C | synonymous_variant | 0.2 |
fbiC | 1305012 | c.2082G>C | synonymous_variant | 0.27 |
fbiC | 1305015 | c.2085G>C | synonymous_variant | 0.27 |
fbiC | 1305021 | c.2091C>A | synonymous_variant | 0.19 |
fbiC | 1305027 | c.2097G>A | synonymous_variant | 0.17 |
fbiC | 1305033 | c.2103T>C | synonymous_variant | 0.17 |
fbiC | 1305042 | c.2112A>G | synonymous_variant | 0.12 |
fbiC | 1305045 | c.2115A>G | synonymous_variant | 0.13 |
fbiC | 1305063 | c.2133G>C | synonymous_variant | 0.12 |
fbiC | 1305066 | c.2136T>C | synonymous_variant | 0.12 |
fbiC | 1305069 | c.2139G>C | synonymous_variant | 0.12 |
fbiC | 1305096 | c.2166T>C | synonymous_variant | 0.13 |
fbiC | 1305099 | c.2169T>G | synonymous_variant | 0.12 |
fbiC | 1305111 | c.2181C>T | synonymous_variant | 0.12 |
Rv1258c | 1406760 | c.580_581insC | frameshift_variant | 1.0 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
rrl | 1475483 | n.1826C>T | non_coding_transcript_exon_variant | 0.17 |
rrl | 1475505 | n.1848G>A | non_coding_transcript_exon_variant | 0.17 |
rrl | 1475526 | n.1869C>A | non_coding_transcript_exon_variant | 0.19 |
rrl | 1475599 | n.1942A>G | non_coding_transcript_exon_variant | 0.22 |
rrl | 1475608 | n.1951T>C | non_coding_transcript_exon_variant | 0.24 |
rrl | 1475638 | n.1981C>T | non_coding_transcript_exon_variant | 0.24 |
rrl | 1475642 | n.1985T>C | non_coding_transcript_exon_variant | 0.25 |
rrl | 1475657 | n.2000A>G | non_coding_transcript_exon_variant | 0.25 |
rrl | 1475659 | n.2002G>T | non_coding_transcript_exon_variant | 0.28 |
rrl | 1475766 | n.2109G>A | non_coding_transcript_exon_variant | 0.17 |
inhA | 1674461 | p.Lys87Arg | missense_variant | 0.15 |
inhA | 1674471 | c.270G>T | synonymous_variant | 0.15 |
inhA | 1674480 | c.279T>C | synonymous_variant | 0.2 |
inhA | 1674486 | c.285T>C | synonymous_variant | 0.2 |
inhA | 1674489 | c.288G>T | synonymous_variant | 0.17 |
inhA | 1674504 | c.303C>G | synonymous_variant | 0.14 |
inhA | 1674546 | c.345T>C | synonymous_variant | 0.13 |
rpsA | 1833667 | c.126C>G | synonymous_variant | 0.14 |
rpsA | 1833703 | c.162C>T | synonymous_variant | 0.13 |
rpsA | 1833724 | c.183C>G | synonymous_variant | 0.16 |
rpsA | 1833727 | c.186G>C | synonymous_variant | 0.13 |
rpsA | 1833793 | c.252C>T | synonymous_variant | 0.14 |
rpsA | 1833811 | c.270G>T | synonymous_variant | 0.14 |
rpsA | 1833832 | c.291G>A | synonymous_variant | 0.13 |
rpsA | 1834177 | c.636A>C | synonymous_variant | 1.0 |
rpsA | 1834222 | c.681T>C | synonymous_variant | 0.12 |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.16 |
rpsA | 1834294 | c.753G>T | synonymous_variant | 0.15 |
rpsA | 1834303 | c.762T>C | synonymous_variant | 0.15 |
rpsA | 1834369 | c.828C>G | synonymous_variant | 0.18 |
rpsA | 1834375 | c.834G>A | synonymous_variant | 0.19 |
rpsA | 1834396 | c.855G>C | synonymous_variant | 0.16 |
rpsA | 1834411 | c.870T>C | synonymous_variant | 0.15 |
rpsA | 1834417 | c.876G>C | synonymous_variant | 0.14 |
rpsA | 1834423 | c.882G>C | synonymous_variant | 0.14 |
rpsA | 1834435 | c.894G>C | synonymous_variant | 0.17 |
rpsA | 1834451 | c.910T>C | synonymous_variant | 0.16 |
rpsA | 1834468 | c.927A>G | synonymous_variant | 0.16 |
rpsA | 1834474 | c.933C>G | synonymous_variant | 0.16 |
rpsA | 1834489 | c.948T>C | synonymous_variant | 0.18 |
rpsA | 1834495 | c.954G>A | synonymous_variant | 0.18 |
rpsA | 1834498 | c.957C>T | synonymous_variant | 0.19 |
rpsA | 1834528 | c.987T>C | synonymous_variant | 0.18 |
rpsA | 1834546 | c.1005T>C | synonymous_variant | 0.15 |
rpsA | 1834555 | c.1014T>C | synonymous_variant | 0.15 |
tlyA | 1917972 | c.33A>G | synonymous_variant | 1.0 |
katG | 2154724 | p.Arg463Leu | missense_variant | 1.0 |
katG | 2155316 | p.Ile266Val | missense_variant | 0.13 |
katG | 2155683 | p.Lys143Asn | missense_variant | 0.12 |
PPE35 | 2167926 | p.Leu896Ser | missense_variant | 1.0 |
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 |
kasA | 2518833 | p.Gly240Asp | missense_variant | 0.13 |
pepQ | 2860468 | c.-50A>G | upstream_gene_variant | 0.15 |
ribD | 2986709 | c.-130C>A | upstream_gene_variant | 0.14 |
Rv2752c | 3064530 | c.1662G>C | synonymous_variant | 0.12 |
Rv2752c | 3064539 | c.1653T>C | synonymous_variant | 0.12 |
Rv2752c | 3064551 | c.1641C>G | synonymous_variant | 0.12 |
Rv2752c | 3064554 | c.1638C>T | synonymous_variant | 0.13 |
Rv2752c | 3064560 | c.1632C>G | synonymous_variant | 0.13 |
Rv2752c | 3064563 | c.1629A>G | synonymous_variant | 0.13 |
Rv2752c | 3064566 | c.1626G>C | synonymous_variant | 0.13 |
Rv2752c | 3064584 | c.1608G>C | synonymous_variant | 0.12 |
Rv2752c | 3064590 | c.1602C>T | synonymous_variant | 0.12 |
Rv2752c | 3064596 | c.1596G>C | synonymous_variant | 0.12 |
Rv2752c | 3064599 | c.1593A>G | synonymous_variant | 0.14 |
Rv2752c | 3064602 | c.1590T>C | synonymous_variant | 0.14 |
Rv2752c | 3064608 | c.1584G>C | synonymous_variant | 0.13 |
Rv2752c | 3064612 | p.Ile527Gly | missense_variant | 0.13 |
Rv2752c | 3064617 | c.1575T>C | synonymous_variant | 0.13 |
Rv2752c | 3064624 | c.1567_1568insCA | frameshift_variant | 0.13 |
Rv2752c | 3064627 | p.Asn522Ser | missense_variant | 0.13 |
Rv2752c | 3064653 | c.1539A>C | synonymous_variant | 0.12 |
Rv2752c | 3064659 | c.1533G>C | synonymous_variant | 0.12 |
Rv2752c | 3064663 | p.Lys510Arg | missense_variant | 0.12 |
Rv2752c | 3064674 | c.1518C>G | synonymous_variant | 0.15 |
Rv2752c | 3064677 | c.1515A>G | synonymous_variant | 0.15 |
Rv2752c | 3064704 | c.1488T>G | synonymous_variant | 0.15 |
ald | 3086788 | c.-32T>C | upstream_gene_variant | 1.0 |
ald | 3087311 | c.492C>A | synonymous_variant | 0.15 |
fbiD | 3339184 | p.Lys23Glu | missense_variant | 0.22 |
Rv3083 | 3448337 | c.-167C>G | upstream_gene_variant | 0.14 |
fprA | 3473996 | c.-11_-10insA | upstream_gene_variant | 1.0 |
Rv3236c | 3612813 | p.Thr102Ala | missense_variant | 1.0 |
clpC1 | 4040162 | c.543G>C | synonymous_variant | 0.2 |
clpC1 | 4040165 | c.540G>C | synonymous_variant | 0.2 |
clpC1 | 4040171 | c.534C>G | synonymous_variant | 0.2 |
clpC1 | 4040200 | c.505T>C | synonymous_variant | 0.17 |
clpC1 | 4040201 | c.504C>G | synonymous_variant | 0.17 |
clpC1 | 4040207 | c.498T>G | synonymous_variant | 0.18 |
clpC1 | 4040213 | c.490_492delTCTinsAGC | synonymous_variant | 0.18 |
clpC1 | 4040222 | c.483G>A | synonymous_variant | 0.18 |
clpC1 | 4040225 | c.480A>C | synonymous_variant | 0.18 |
clpC1 | 4040228 | c.477G>C | synonymous_variant | 0.18 |
clpC1 | 4040231 | c.474C>T | synonymous_variant | 0.18 |
clpC1 | 4040237 | c.468C>T | synonymous_variant | 0.2 |
clpC1 | 4040243 | c.462C>G | synonymous_variant | 0.19 |
clpC1 | 4040249 | c.456A>G | synonymous_variant | 0.2 |
clpC1 | 4040258 | c.447G>A | synonymous_variant | 0.19 |
clpC1 | 4040267 | c.438A>G | synonymous_variant | 0.21 |
clpC1 | 4040273 | c.432T>C | synonymous_variant | 0.23 |
clpC1 | 4040277 | c.427_428delTCinsAG | synonymous_variant | 0.23 |
clpC1 | 4040279 | c.426C>G | synonymous_variant | 0.25 |
clpC1 | 4040284 | c.421C>T | synonymous_variant | 0.25 |
clpC1 | 4040324 | c.381G>C | synonymous_variant | 0.21 |
clpC1 | 4040330 | c.375C>G | synonymous_variant | 0.19 |
clpC1 | 4040342 | c.363C>G | synonymous_variant | 0.17 |
embC | 4240771 | c.909G>T | synonymous_variant | 0.17 |
embC | 4240780 | c.918T>C | synonymous_variant | 0.17 |
embC | 4240786 | c.924C>T | synonymous_variant | 0.16 |
embC | 4240789 | c.927T>C | synonymous_variant | 0.16 |
embC | 4240811 | p.Phe317Leu | missense_variant | 0.15 |
embC | 4240825 | c.963G>A | synonymous_variant | 0.14 |
embC | 4240831 | c.969T>G | synonymous_variant | 0.14 |
embC | 4240867 | c.1005T>C | synonymous_variant | 0.12 |
embC | 4240870 | c.1008T>C | synonymous_variant | 0.12 |
embC | 4240873 | c.1011C>G | synonymous_variant | 0.14 |
embC | 4240879 | c.1017G>C | synonymous_variant | 0.15 |
embC | 4240880 | p.Ala340Thr | missense_variant | 0.15 |
embC | 4240885 | c.1023T>C | synonymous_variant | 0.12 |
embC | 4241140 | c.1278A>G | synonymous_variant | 0.13 |
embC | 4241176 | c.1314C>G | synonymous_variant | 0.15 |
embC | 4241179 | c.1317G>A | synonymous_variant | 0.16 |
embC | 4241182 | c.1320G>C | synonymous_variant | 0.16 |
embC | 4241215 | c.1353C>G | synonymous_variant | 0.13 |
embC | 4241230 | c.1368A>G | synonymous_variant | 0.13 |
embC | 4241248 | c.1386G>C | synonymous_variant | 0.14 |
embC | 4241251 | c.1389T>C | synonymous_variant | 0.14 |
embC | 4241254 | c.1392C>G | synonymous_variant | 0.14 |
embC | 4241256 | p.Arg465Thr | missense_variant | 0.14 |
embC | 4241268 | p.Val469Ala | missense_variant | 0.15 |
embC | 4241272 | c.1410A>G | synonymous_variant | 0.15 |
embC | 4241275 | c.1413A>G | synonymous_variant | 0.15 |
embC | 4241279 | p.Val473Ile | missense_variant | 0.15 |
embC | 4241287 | c.1425G>A | synonymous_variant | 0.2 |
embC | 4241288 | p.Ile476Leu | missense_variant | 0.2 |
embC | 4241301 | p.Ala480Val | missense_variant | 0.2 |
embC | 4241314 | c.1452G>A | synonymous_variant | 0.13 |
embC | 4241319 | p.Pro486Leu | missense_variant | 0.13 |
embC | 4241326 | c.1464T>C | synonymous_variant | 0.12 |
embC | 4241329 | c.1467T>C | synonymous_variant | 0.12 |
embC | 4241332 | c.1470T>C | synonymous_variant | 0.12 |
embC | 4241392 | c.1530G>C | synonymous_variant | 0.12 |
embC | 4241394 | p.Lys511Arg | missense_variant | 0.12 |
embC | 4241407 | c.1545A>G | synonymous_variant | 0.15 |
embC | 4241411 | p.Ile517Leu | missense_variant | 0.15 |
embC | 4241419 | c.1557C>T | synonymous_variant | 0.14 |
embC | 4242266 | p.Arg802Cys | missense_variant | 0.18 |
embA | 4242643 | c.-590C>T | upstream_gene_variant | 1.0 |
embA | 4243460 | c.228C>T | synonymous_variant | 1.0 |
embB | 4247497 | c.984T>C | synonymous_variant | 0.17 |
embB | 4247512 | c.999T>C | synonymous_variant | 0.14 |
embB | 4247539 | c.1026T>C | synonymous_variant | 0.12 |
embB | 4247542 | c.1029C>G | synonymous_variant | 0.12 |
embB | 4247544 | p.Ser344Thr | missense_variant | 0.12 |
embB | 4247608 | c.1095G>C | synonymous_variant | 0.17 |
embB | 4247611 | c.1098G>C | synonymous_variant | 0.17 |
embB | 4247629 | c.1116C>A | synonymous_variant | 0.15 |
embB | 4247632 | c.1119C>G | synonymous_variant | 0.15 |
embB | 4247635 | c.1122G>A | synonymous_variant | 0.14 |
embB | 4247638 | c.1125G>C | synonymous_variant | 0.14 |
embB | 4247646 | p.Glu378Ala | missense_variant | 0.15 |
embB | 4247656 | c.1143A>G | synonymous_variant | 0.14 |
embB | 4247657 | p.Pro382Ala | missense_variant | 0.13 |
embB | 4247662 | c.1149C>G | synonymous_variant | 0.14 |
aftB | 4267647 | p.Asp397Gly | missense_variant | 1.0 |
aftB | 4268779 | p.Gly20Arg | missense_variant | 0.25 |
ethA | 4327481 | c.-8G>A | upstream_gene_variant | 1.0 |
whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 1.0 |
gid | 4407588 | c.615A>G | synonymous_variant | 1.0 |
gid | 4407620 | p.Tyr195His | missense_variant | 1.0 |
gid | 4407927 | p.Glu92Asp | missense_variant | 1.0 |