Rv0668 - c.1566T>C


Drug resistance types
115 Sensitive 23 RR-TB 104 HR-TB 33 MDR-TB 16 Pre-XDR-TB 0 XDR-TB 145 Other
lineage Counts
lineage Count
lineage4.9 87
lineage4.9;lineage2.2 1
lineage4 80
lineage2.2 7
lineage2 2
lineage4.4.1.1.1 3
86
lineage2.2.1 29
lineage4.3.4.1 1
lineage4.4 1
lineage4.2.1 3
La1.4 1
La1.8.1 9
La1.7.1 1
lineage4.5 3
lineage1.2.1.2 1
lineage4.8 14
lineage3 14
lineage4.1.1.3 2
lineage4.1.1 2
lineage4.3.4.2.1 7
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage1.2.1.1 1
lineage2.1 2
lineage4.1.2.1 19
lineage4.3 1
lineage4.4.1.1 2
lineage3.1.2.1 2
lineage4.3.4.2 1
lineage4.8;La3 1
lineage4.1;lineage1 1
lineage4.1 3
lineage4.6.3 1
lineage4.2.2.2 1
lineage4.1.1.2 1
lineage4.3.3 2
lineage1.1.1 1
lineage4.6.2.2 5
lineage4.7 1
lineage1.1.2 4
lineage4.1.3;lineage1.1.2 1
lineage4.9;lineage2.1 1
lineage2.2.1.1 1
lineage4.1.2 2
lineage4.3.2.1 1
lineage4.4.1.2 2
La1 1
lineage4.1.3 2
lineage4;lineage3.1 1
lineage4.3.2 3
La1.3 1
lineage4.9;La1.3 1
La1.2 1
lineage4.5;lineage2.2.1 1
lineage1.1.3.1 1
lineage4.8;lineage4.1 2
lineage6.1.3 1
lineage6.3.1 1
lineage6 1
lineage4.4.1.1;lineage4.1.2.1 1
lineage2.2.2 1
lineage4.9;lineage2.2.1 2
La1.6 1
La3 1
lineage4.9;lineage4.2.1 1
spoligotype Counts
spoligotype Count
None 436
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180420 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1181237 Sensitive lineage2.2 None
SRR1184021 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181402 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR12416824 HR-TB None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR14801749 Sensitive None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR16627752 RR-TB lineage4.4 None
SRR15315833 Sensitive lineage4.9 None
SRR15315871 Sensitive lineage4.9 None
SRR16156775 Other lineage4.9 None
SRR16157123 Other lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR16156814 Sensitive lineage4.9 None
SRR16278274 Other La1.4 None
SRR1791910 Other None
SRR1791747 Other La1.8.1 None
SRR1792478 HR-TB La1.7.1 None
SRR18213713 HR-TB lineage4.5 None
SRR19303884 HR-TB None
SRR19295647 Sensitive lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR19303931 Other lineage2.2.1 None
SRR20632814 Sensitive lineage4 None
SRR20969475 Other lineage1.2.1.2 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
ERR11081258 Other lineage4.8 None
ERR11068570 Other lineage4 None
SRR22424787 Sensitive lineage4.9 None
ERR11081257 Other lineage4.8 None
SRR8692887 Other None
ERR11081864 Other lineage3 None
SRR8692800 Other lineage4 None
SRR8692791 Other lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR4815604 HR-TB None
ERR176793 Other lineage4.1.1 None
ERR4815471 Other lineage4.9 None
ERR4815310 Other None
ERR4814352 HR-TB lineage2.2.1 None
ERR161034 Other lineage4.3.4.2.1 None
ERR4814639 HR-TB lineage4 None
SRR3675221 HR-TB None
SRR3675465 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3675236 HR-TB None
ERR4814734 Other lineage1.2.1.1 None
ERR4815489 Sensitive lineage4.9 None
ERR702405 Sensitive lineage2.1 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675246 Sensitive lineage4 None
ERR176549 Other lineage4.3.4.2.1 None
SRR3675311 Other None
ERR3275201 Sensitive lineage4.8 nl
ERR176643 HR-TB None
ERR4815550 Other lineage4 None
ERR176568 Other lineage4.3 None
ERR176751 HR-TB None
ERR4816964 Other lineage4.9 None
ERR192070 Other None
ERR4816999 Other None
ERR2229542 Other lineage4.8 None
ERR2027263 Other lineage4 None
ERR2027233 RR-TB lineage4.1.2.1 None
ERR4815815 Sensitive lineage4 None
ERR212001 HR-TB None
ERR4817060 RR-TB None
SRR3675572 Other None
ERR2446509 Other lineage3 nl
ERR4816470 Other lineage3 None
ERR4816585 Other lineage2.2 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR212033 HR-TB None
ERR4817069 RR-TB None
ERR4816548 MDR-TB lineage4.5 None
ERR4816550 Sensitive lineage4.9 None
ERR216965 HR-TB lineage4.9 None
SRR5341384 Sensitive lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR4817667 HR-TB lineage4.8 None
ERR4817896 HR-TB lineage2.2.1 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR4817893 Other lineage4.8;La3 None
ERR4817735 Other lineage4.8 None
ERR4819068 Sensitive lineage4.1;lineage1 None
ERR4818710 Sensitive lineage4.9 None
ERR4818021 Other La1.8.1 None
SRR7496472 Other None
ERR4818615 Other None
ERR2446566 Other lineage4.1 None
ERR4818110 Sensitive lineage4.9 None
ERR2446413 Sensitive lineage4.6.3 None
ERR4819051 Other lineage4 None
ERR2513470 Other lineage4.2.2.2 None
ERR2513259 Other lineage3 None
ERR4818561 HR-TB lineage4 None
ERR4818252 Other lineage4.1.1.2 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR2446570 Sensitive lineage4.8 nl
SRR5007188 Other lineage4 None
SRR5341453 Sensitive None
ERR4820854 Other lineage4.1.2.1 None
ERR4819546 HR-TB lineage3 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4819280 Sensitive lineage4 None
ERR4819314 Other lineage1.1.1 None
ERR4819357 Other lineage4.9 None
SRR5341456 Other None
SRR5341425 Other lineage4 None
SRR5341387 Other lineage4 None
SRR5341396 Other lineage4 None
ERR4819383 RR-TB lineage4.9 None
SRR5341366 Sensitive lineage4 None
ERR4819781 Other lineage2.2.1 None
SRR5341302 HR-TB None
ERR4820030 Other lineage4.9 None
SRR5341333 HR-TB None
SRR5341461 Sensitive lineage4 None
SRR5341455 Sensitive lineage4 None
SRR5341298 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341299 Sensitive lineage4 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341303 RR-TB lineage4 None
SRR5341308 Sensitive lineage4 None
ERR4819933 Other lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR5341310 Other lineage1.1.2 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2515228 Other lineage2.2.1 None
SRR5341467 Other lineage4 None
ERR2693238 HR-TB lineage4.9 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR5341469 Other lineage4 None
ERR2517514 Sensitive lineage4.8 None
SRR6046210 Other lineage4 None
SRR6045577 Sensitive lineage4.9 None
ERR4821276 Other lineage3 None
ERR4822101 Sensitive lineage4.1.3;lineage1.1.2 None
ERR4821655 Sensitive lineage4 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
SRR6046141 Other lineage4.9 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6045832 HR-TB lineage4.9 None
SRR6045892 Sensitive None
SRR6044780 Other lineage4.9 None
SRR6044855 Other lineage4.9 None
SRR6044790 HR-TB None
SRR6044835 Sensitive lineage4 None
SRR6044875 HR-TB lineage4.9 None
SRR6044952 RR-TB lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045010 Other lineage4 None
SRR6046066 HR-TB None
SRR6045359 Sensitive lineage4.9 None
SRR6046250 Other lineage4.9 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046225 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
SRR6046385 Other lineage4.9 None
SRR6046299 HR-TB None
SRR6046540 HR-TB None
ERR2851356 Sensitive lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6046521 Other lineage4.4.1.1 None
SRR6511621 HR-TB None
SRR6046834 Sensitive lineage4.9 None
SRR6785413 Other lineage2.2.1 None
ERR323037 HR-TB lineage4 None
ERR502470 RR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831546 HR-TB lineage2.2 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4831657 MDR-TB lineage2.2.1 None
SRR6785263 Sensitive lineage2.2.1 None
SRR6785268 Sensitive lineage4.2.1 None
SRR6785267 Other lineage2.2.1 None
SRR6785527 Sensitive lineage2.2.1 None
SRR6789624 MDR-TB lineage4.1 None
SRR6789626 Other None
SRR6896576 Other lineage2.2.1 None
ERR502510 Sensitive lineage4 None
SRR6982365 Other lineage2.2.1 None
ERR502532 HR-TB None
ERR5311077 RR-TB La1.8.1 None
ERR3275190 Other lineage3 nl
SRR9970978 Sensitive lineage4.1.2 None
SRR7131023 Other lineage4.1.2.1 None
SRR9970980 Other lineage4.1.2 None
SRR7535082 Sensitive lineage4 None
SRR7496509 Other None
SRR7496517 Other None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR9970979 Sensitive lineage4.8 None
SRR7585435 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971026 Sensitive lineage4.4.1.1.1 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
ERR323085 Sensitive lineage4 None
ERR323043 HR-TB None
ERR323057 Sensitive lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323066 Sensitive lineage4 None
ERR108471 HR-TB lineage4 None
ERR067712 HR-TB lineage4 None
ERR1023525 HR-TB lineage4 None
ERR1034634 HR-TB None
ERR1035157 Other lineage4.9 None
ERR1063883 Sensitive lineage4 None
ERR1063896 Sensitive None
ERR323107 Other lineage4 None
ERR067699 HR-TB lineage4 None
ERR1035122 Sensitive None
ERR11049020 Other lineage4.8 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR133825 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR137286 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR3283013 MDR-TB lineage4 None
ERR3283028 Other None
ERR3283030 HR-TB lineage4.9 None
ERR3283027 HR-TB None
ERR3283040 HR-TB None
ERR3283043 Other lineage4.9 None
ERR3283036 HR-TB None
ERR3283055 HR-TB None
ERR3468488 RR-TB La1.8.1 None
ERR323115 Sensitive lineage4 None
ERR3283010 Other La1 None
ERR3283014 HR-TB None
ERR3283021 HR-TB None
ERR3283031 HR-TB None
ERR3283047 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3439441 Other La1.8.1 None
ERR3445504 HR-TB None
ERR3468659 Other lineage4.9 None
ERR363456 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR3797015 HR-TB None
ERR373945 HR-TB lineage4 None
ERR3797048 HR-TB None
ERR3797019 Other La1.8.1 None
ERR3797046 HR-TB None
ERR3797047 HR-TB lineage4 None
ERR3797067 Other La1.8.1 None
ERR3797065 MDR-TB lineage4 None
ERR3797069 Other None
ERR3797063 HR-TB None
ERR3797073 HR-TB La1.8.1 None
ERR3797080 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR3797064 Sensitive None
ERR3797087 Sensitive lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
ERR3804155 Other lineage4.1.2.1 None
ERR4024991 Other None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR405209 Sensitive lineage4 None
ERR4178291 Sensitive lineage4.3.2 None
ERR473323 HR-TB lineage4.9 None
ERR4188247 HR-TB None
ERR4407463 HR-TB None
ERR473303 Sensitive lineage4.9 None
ERR4596902 HR-TB lineage3 None
ERR4596910 Sensitive lineage4 None
ERR4769419 Other lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR473367 Sensitive lineage4.9 None
ERR4769506 Sensitive La1.3 None
ERR4769442 HR-TB lineage4 None
ERR4769474 HR-TB lineage4 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769508 RR-TB lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
ERR4796254 Sensitive lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4796577 MDR-TB None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4769497 HR-TB La1.2 None
ERR4797184 Sensitive lineage4 None
ERR4797474 Other None
ERR4797264 Sensitive None
ERR4797193 HR-TB lineage1.1.2 None
ERR4798823 HR-TB lineage4 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4798099 Other None
ERR4799378 Sensitive lineage4 None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR5336148 Other None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR4800257 Sensitive lineage1.1.2 None
ERR4800341 Other lineage3 None
ERR6358951 HR-TB lineage4 None
ERR6359069 Other lineage4.9 None
ERR6359066 HR-TB lineage4 None
ERR6358979 Other None
ERR6359070 Other lineage4.9 None
ERR6865895 Sensitive lineage4.3.2 None
ERR6359074 HR-TB lineage4.9 None
ERR6866022 Other None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6866410 Sensitive None
ERR736831 HR-TB lineage4.9 None
ERR702404 HR-TB None
ERR702406 HR-TB None
ERR6866547 Sensitive lineage4 None
ERR6866639 Other None
ERR736834 Sensitive lineage4 None
ERR736867 HR-TB None
ERR736837 Other lineage4.9 None
ERR736848 HR-TB None
ERR736856 HR-TB lineage4 None
ERR736872 Sensitive lineage4 None
ERR736874 HR-TB None
ERR751326 Sensitive lineage4 None
ERR752229 Other lineage4.5 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9117709 HR-TB None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9117721 HR-TB lineage1.1.2 None
ERR9117805 Other lineage4.3.2 None
ERR9786443 Sensitive lineage4.8 None
ERR9634265 Sensitive None
ERR9786076 Sensitive lineage3 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9786440 Other lineage4.1 None
ERR9786515 Other lineage4.1.2.1 None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR9786604 Other None
ERR9786569 Other lineage4.8 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786617 Other lineage4.1.1 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786671 Other None
ERR9786642 Other lineage4.1.2.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9786843 Other None
ERR9787256 Other lineage6.1.3 None
ERR9787139 Other lineage6.3.1 None
ERR9787165 Other lineage6 None
ERR9787197 Other None
ERR990545 Other lineage3 None
SRR1013528 Pre-XDR-TB lineage2.2 None
SRR1013527 RR-TB lineage2.2 None
SRR1013531 MDR-TB lineage4.9 None
SRR10315567 Other lineage2.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1049672 Other lineage3 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1062868 HR-TB lineage4.9 None
SRR1062865 HR-TB lineage2.2.2 None
SRR1062864 Sensitive lineage4.9;lineage2.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1062867 RR-TB lineage4.9;lineage2.2.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR10809074 Sensitive lineage4 None
SRR1062928 RR-TB lineage4 None
SRR10808399 Sensitive lineage4 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR10808668 Sensitive lineage2.2.1 None
SRR10808805 Sensitive None
SRR10993951 RR-TB La1.6 None
SRR1140724 HR-TB lineage2.2.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1106670 Other lineage4.9 None
SRR1140736 RR-TB None
SRR1141261 MDR-TB lineage4.9 None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1158918 Sensitive lineage4 None
SRR11462861 Other La1.8.1 None
SRR1166181 MDR-TB lineage4 None
SRR1167384 Other lineage4 None
SRR1169249 Other La3 None
SRR1168955 MDR-TB lineage4.9;lineage4.2.1 None
SRR1169194 Other None
SRR1169306 Other None
SRR1172885 HR-TB lineage4.9 None
SRR1172234 Other None
SRR1173170 Other lineage4.9 None
SRR1173568 Other lineage4.9 None
SRR1173777 Other lineage4 None
SRR1175052 HR-TB lineage4.9 None
SRR1175474 HR-TB lineage4.9 None
SRR1175491 MDR-TB lineage4 None
SRR1173740 Other None
SRR1173770 Other lineage4.9 None
SRR1175473 Other lineage4.9 None
SRR1175472 MDR-TB lineage4 None
SRR1175487 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None