Rv0668 - c.1566T>C


Drug resistance types
53 Sensitive 11 RR-TB 109 HR-TB 21 MDR-TB 8 Pre-XDR-TB 3 XDR-TB 174 Other
lineage Counts
lineage Count
lineage4.4.1.1 2
lineage2.2.1 25
lineage4.9 152
La1.8.1 4
lineage4.2.2.2 1
lineage4.1.1.3 3
lineage2.2.1;lineage4.5 1
La1;lineage4.9 3
lineage4.6.2.2 5
lineage3 12
lineage4.2.1 2
La1.7;lineage4.9 2
lineage4.1.2.1 16
lineage1.1.2 3
lineage4.8 12
La3;lineage4.9 14
lineage4.4.1.2 2
La3;lineage4.8 2
lineage2.2.2 1
lineage2.1;lineage4.9 10
La1;lineage4.1.2 1
lineage2.1 2
lineage2.1;lineage4.9;lineage6.3 6
lineage6.1.3 2
lineage4.9;lineage6.3 3
20
M.canetti;lineage2.2 2
lineage4.1.1.2 1
lineage4.8;lineage4.9 2
lineage4.7 1
La3;lineage1.1.2 1
lineage4.1.2 1
lineage4.3.4.2.1 6
lineage4 4
lineage4.4 1
La1.7;lineage3.1;lineage4 1
lineage4.1.3 2
lineage4.5 2
lineage1.2.1.2 1
lineage4.6.3 1
lineage4.3.2 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.1 1
La3;lineage2.1;lineage4.9 3
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage2.2.2;lineage6.2 2
La1.4 1
lineage4.1.1.1 3
lineage1.1.3.1 1
lineage4.6.3;lineage4.9 1
lineage4.1.2.1;lineage4.4.1 1
La1.7;lineage4.9;lineage6 1
lineage2.1;lineage6.3 2
lineage4.4.1.1.1 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.7.1 1
lineage4.3.3 2
La3;M.canetti;lineage4.9 1
lineage3.1.2.1 2
lineage1.1.1 1
La1.2.BCG;La1.8.1 1
lineage2.2.1;lineage3 1
lineage4.3.2.1 1
lineage4.1;lineage4.8 2
lineage4.3.4.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.8.1 1
lineage1.1.2;lineage4.1.3 1
La3;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage2.2.1 1
lineage2.2.1;lineage4.9 1
La1.2.BCG 1
lineage3.1 1
lineage6.3.1 1
lineage2.2;lineage4.9 1
La1;lineage2;lineage4.9 1
lineage4.9;lineage6.1.3 1
spoligotype Counts
spoligotype Count
None 379
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR14801749 HR-TB lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR2513470 Other lineage4.2.2.2 None
ERR926158 Sensitive lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR1063846 HR-TB lineage4.9 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
SRR1180996 Other lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR3275190 Other lineage3 nl
SRR1141261 Sensitive lineage4.9 None
SRR6785268 Sensitive lineage4.2.1 None
SRR6046210 Other lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4797193 HR-TB lineage1.1.2 None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR1172885 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR2446570 Sensitive lineage4.8 nl
SRR21690574 Other lineage4.1.2.1 None
SRR10808399 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
SRR6982365 Sensitive lineage2.2.1 None
ERR133825 HR-TB La1;lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR3797047 MDR-TB lineage4.9 None
SRR6785267 Other lineage2.2.1 None
SRR3675457 Other lineage4.9 None
SRR16156775 Other lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
SRR1062865 Sensitive lineage2.2.2 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR1013527 Other lineage2.2.1 None
SRR1173777 Sensitive lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR502470 RR-TB lineage4.9 None
ERR9787165 Other lineage6.1.3 None
SRR3675311 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR926155 Other lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR7131023 Other lineage4.1.2.1 None
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR971389 Other lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
ERR9786843 Other None
ERR11252736 Other lineage4.9 None
SRR18213713 HR-TB None
ERR212001 HR-TB None
ERR4407463 HR-TB None
ERR4816999 Other None
SRR6045795 Other lineage2.2.1 None
ERR137286 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4818252 HR-TB lineage4.1.1.2 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR369157 Sensitive lineage4.9 None
SRR5341298 Other lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR3283055 HR-TB lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR9970980 HR-TB lineage4.1.2 None
SRR1791747 Other La1.8.1 None
ERR6866639 HR-TB lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR176549 Other lineage4.3.4.2.1 None
SRR6046141 Other lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797015 HR-TB lineage4.9 None
ERR3283031 Other La3;lineage4.9 None
ERR2515228 Sensitive lineage2.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR11081864 Other lineage3 None
SRR5341300 HR-TB lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR4769508 RR-TB lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR16627752 RR-TB lineage4.4 None
SRR16156817 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
SRR5341310 Other lineage1.1.2 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3797019 Other La1.8.1 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR124636 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4816548 HR-TB lineage4.5 None
ERR4816470 HR-TB lineage3 None
SRR1175052 HR-TB lineage4.9 None
ERR926160 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR7496472 Other lineage4.9 None
SRR6046521 Other lineage4.4.1.1 None
ERR1035122 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
SRR6785263 Sensitive lineage2.2.1 None
ERR3273109 HR-TB lineage4 None
SRR20969475 Other lineage1.2.1.2 None
ERR2446413 Sensitive lineage4.6.3 None
SRR3675235 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR3797070 Other lineage4.9 None
ERR9786443 Sensitive lineage4.8 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323107 HR-TB lineage4.9 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
ERR3283014 Other La3;lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR6044875 Other lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR4769444 HR-TB lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR4819781 Other lineage2.2.1 None
SRR6044876 Sensitive lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR6785527 Sensitive lineage2.2.1 None
ERR4821276 Sensitive lineage3 None
ERR9786440 Other lineage4.1 None
SRR1165628 Other La3;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
ERR11081258 Other lineage4.8 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR3283040 HR-TB lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6044835 Other lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR16278274 Other La1.4 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1062919 HR-TB lineage2.2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR2027233 Sensitive lineage4.1.2.1 None
ERR9786617 Other lineage4.1.1.1 None
ERR926161 Sensitive lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR502511 HR-TB lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR9786671 Other None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR4817069 RR-TB None
ERR4796577 HR-TB None
SRR7496517 Other None
ERR9787197 Other None
ERR4817060 Other None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR752229 Other lineage4.5 None
ERR6358979 HR-TB lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
ERR4797474 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR736872 HR-TB lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR4817893 Other La3;lineage4.8 None
SRR20632814 Sensitive lineage4.9 None
SRR1049673 Pre-XDR-TB lineage3 None
ERR9786515 Other lineage4.1.2.1 None
SRR3675549 Other lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR10808668 Other lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786076 Other lineage3 None
SRR1159378 Other lineage4.9 None
SRR11462861 Other La1.8.1 None
ERR3275201 Sensitive lineage4.8 nl
ERR4817735 Other lineage4.8 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR926165 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR10315466 RR-TB lineage2.2.1 None
ERR4769433 RR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
ERR926156 Other lineage4.9 None
ERR4800102 Sensitive lineage3.1.2.1 None
SRR1167384 Other La3;lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2513259 Other lineage3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR4819314 HR-TB lineage1.1.1 None
ERR176741 Other lineage4.9 None
ERR990545 RR-TB lineage3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR4818561 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR6046066 Other lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR1063883 HR-TB lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR26159043 Other lineage4.9 None
ERR323066 HR-TB lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
SRR9971026 Sensitive lineage4.4.1.1.1 None
ERR3283011 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR4820854 Other lineage4.1.2.1 None
ERR485006 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR2446566 Other lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
ERR926163 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
SRR3675221 Other lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
ERR4815471 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR4796254 Other lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4819546 HR-TB lineage3 None
ERR926164 Other lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR1172234 Other lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR5341455 Sensitive lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR1106670 Sensitive lineage4.9 None
SRR1158918 Other lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR4822101 Sensitive lineage1.1.2;lineage4.1.3 None
SRR5341467 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR9786601 Other lineage4.1.2.1 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR502510 HR-TB lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR9786645 Other lineage4.6.2.2 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR473334 HR-TB lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR4769442 Sensitive lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
SRR7496509 Other None
ERR1063896 HR-TB None
ERR9786604 Other None
ERR4815604 Other None
SRR28351442 HR-TB lineage3.1 None
ERR9117709 Other None
SRR6789626 Other None
SRR25827682 Other None
SRR3675236 Other None
ERR3797029 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR373945 Other lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR2517514 Sensitive lineage4.8 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR6785413 Other lineage2.2.1 None
ERR6359070 Sensitive lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4798099 HR-TB lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR369151 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
ERR702405 HR-TB lineage4.9 None
ERR4816964 HR-TB lineage4.9 None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR4188247 HR-TB lineage4.9 None
SRR1169194 Other lineage4.9 None
ERR4816717 RR-TB lineage3.1.2.1 None
SRR1140724 Other lineage2.2.1 None
ERR9786569 Other lineage4.8 None
SRR7535082 Other lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR3675214 Other lineage4.9 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
ERR3283044 Other lineage4 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR2446509 Other lineage3 nl
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR9787256 Other lineage6.1.3 None
ERR4769439 HR-TB lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR5818647 Other lineage4.3.4.2.1 None
SRR3675232 Other lineage4.1.2.1 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1169306 Other La3;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None