TB-Profiler result

Run: SRR6982365
Summary

Run ID: SRR6982365

Sample name:

Date: 04-04-2023 18:35:21

Number of reads: 419870

Percentage reads mapped: 94.24

Strain: lineage2.2.1

Drug-resistance: Other

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage2 East-Asian Beijing RD105 0.98
lineage2.2 East-Asian (Beijing) Beijing-RD207 RD105;RD207 1.0
lineage2.2.1 East-Asian (Beijing) Beijing-RD181 RD105;RD207;RD181 0.99
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
embB 4247663 p.Tyr384Asn missense_variant 0.14 ethambutol
embB 4247676 p.Ala388Gly missense_variant 0.14 ethambutol
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7496 c.195C>T synonymous_variant 0.12
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 9304 p.Gly668Asp missense_variant 1.0
fgd1 490889 p.Thr36Ser missense_variant 0.13
fgd1 490907 p.Gln42Arg missense_variant 0.12
fgd1 491742 c.960T>C synonymous_variant 1.0
mshA 575907 p.Ala187Val missense_variant 1.0
ccsA 620625 p.Ile245Met missense_variant 1.0
rpoB 760424 c.618C>G synonymous_variant 0.12
rpoB 760430 c.624T>C synonymous_variant 0.12
rpoB 760946 c.1140A>G synonymous_variant 0.14
rpoB 760973 c.1167G>C synonymous_variant 0.13
rpoB 760982 c.1176G>C synonymous_variant 0.15
rpoB 760991 c.1185G>C synonymous_variant 0.15
rpoB 761006 c.1200C>G synonymous_variant 0.13
rpoB 761015 c.1209G>C synonymous_variant 0.15
rpoB 761021 c.1215G>A synonymous_variant 0.14
rpoB 761027 c.1221A>G synonymous_variant 0.14
rpoB 761036 c.1230G>C synonymous_variant 0.14
rpoB 761037 c.1231T>C synonymous_variant 0.14
rpoB 761057 c.1251G>C synonymous_variant 0.12
rpoB 761440 p.Asp545Ala missense_variant 0.12
rpoB 761531 c.1725C>G synonymous_variant 0.16
rpoB 761537 c.1731C>G synonymous_variant 0.16
rpoB 761561 c.1755C>G synonymous_variant 0.2
rpoB 761564 c.1758G>C synonymous_variant 0.2
rpoB 761570 c.1764T>C synonymous_variant 0.19
rpoB 761573 c.1767C>G synonymous_variant 0.19
rpoB 761579 c.1773G>C synonymous_variant 0.19
rpoB 761606 c.1800C>G synonymous_variant 0.22
rpoB 761612 c.1806G>T synonymous_variant 0.22
rpoB 761615 c.1809A>C synonymous_variant 0.21
rpoB 761636 c.1830G>T synonymous_variant 0.19
rpoB 761645 c.1839C>G synonymous_variant 0.19
rpoB 761648 c.1842T>C synonymous_variant 0.19
rpoB 761657 c.1851C>G synonymous_variant 0.19
rpoB 761669 c.1863C>T synonymous_variant 0.2
rpoB 761675 c.1869G>C synonymous_variant 0.2
rpoB 761711 c.1905C>G synonymous_variant 0.21
rpoB 761717 c.1911C>G synonymous_variant 0.21
rpoB 761735 c.1929C>G synonymous_variant 0.21
rpoB 761747 c.1941G>C synonymous_variant 0.19
rpoB 761765 c.1959T>C synonymous_variant 0.14
rpoB 761772 p.His656Ala missense_variant 0.14
rpoB 761778 p.Asn658Asp missense_variant 0.13
rpoB 761792 c.1986T>C synonymous_variant 0.12
rpoC 762758 c.-612G>C upstream_gene_variant 0.12
rpoC 762776 c.-594C>T upstream_gene_variant 0.12
rpoB 762785 p.Asp993Glu missense_variant 0.13
rpoC 762788 c.-582G>C upstream_gene_variant 0.14
rpoB 762789 p.Leu995Met missense_variant 0.13
rpoB 762799 p.Ala998Gly missense_variant 0.14
rpoC 762812 c.-558C>G upstream_gene_variant 0.12
rpoB 762813 p.Met1003Val missense_variant 0.12
rpoC 762818 c.-552C>G upstream_gene_variant 0.13
rpoC 762824 c.-546C>T upstream_gene_variant 0.14
rpoC 762827 c.-543G>C upstream_gene_variant 0.15
rpoC 762836 c.-534C>T upstream_gene_variant 0.15
rpoC 762857 c.-513C>G upstream_gene_variant 0.23
rpoC 762860 c.-510G>C upstream_gene_variant 0.23
rpoC 762863 c.-507T>C upstream_gene_variant 0.23
rpoC 762899 c.-471G>C upstream_gene_variant 0.27
rpoC 762902 c.-468C>T upstream_gene_variant 0.18
rpoC 762929 c.-441G>C upstream_gene_variant 0.17
rpoC 762932 c.-438G>T upstream_gene_variant 0.17
rpoC 762947 c.-423C>G upstream_gene_variant 0.17
rpoC 762962 c.-408C>T upstream_gene_variant 0.15
rpoC 762983 c.-387C>T upstream_gene_variant 0.15
rpoC 762989 c.-381G>C upstream_gene_variant 0.15
rpoC 763031 c.-339T>C upstream_gene_variant 1.0
rpoC 764605 c.1236G>A synonymous_variant 0.12
rpoC 764611 c.1242G>T synonymous_variant 0.12
rpoC 764650 c.1281G>T synonymous_variant 0.13
rpoC 764803 c.1434C>T synonymous_variant 0.12
rpoC 764809 c.1440C>T synonymous_variant 0.22
rpoC 764815 c.1446A>G synonymous_variant 0.18
rpoC 764827 c.1458G>C synonymous_variant 0.25
rpoC 764854 c.1485G>T synonymous_variant 0.26
rpoC 764858 c.1489T>C synonymous_variant 0.27
rpoC 764888 c.1519T>C synonymous_variant 0.32
rpoC 764932 c.1563C>G synonymous_variant 0.29
rpoC 764935 c.1566T>C synonymous_variant 0.29
rpoC 764948 c.1579T>C synonymous_variant 0.28
rpoC 764968 c.1599T>C synonymous_variant 0.3
rpoC 764995 c.1626C>G synonymous_variant 0.19
rpoC 765019 c.1650A>G synonymous_variant 0.16
rpoC 765034 c.1665T>C synonymous_variant 0.17
rpoC 765040 c.1671T>C synonymous_variant 0.17
rpoC 765041 c.1672T>C synonymous_variant 0.17
rpoC 765047 c.1678T>C synonymous_variant 0.17
rpoC 765052 c.1683C>G synonymous_variant 0.16
rpoC 765055 c.1686C>G synonymous_variant 0.17
rpoC 765073 c.1704G>C synonymous_variant 0.18
rpoC 765076 c.1707A>G synonymous_variant 0.18
rpoC 765079 c.1710T>G synonymous_variant 0.18
rpoC 765082 c.1713G>C synonymous_variant 0.17
rpoC 765085 c.1716T>C synonymous_variant 0.17
rpoC 765089 c.1720T>C synonymous_variant 0.17
rpoC 765103 c.1734G>T synonymous_variant 0.17
rpoC 765121 c.1752G>T synonymous_variant 0.12
rpoC 765132 c.1764_1765delGA frameshift_variant 0.15
rpoC 765466 c.2097C>T synonymous_variant 0.12
rpoC 765478 c.2109T>C synonymous_variant 0.12
rpoC 765499 c.2130C>T synonymous_variant 0.12
rpoC 765505 c.2136C>T synonymous_variant 0.12
rpoC 765508 c.2139C>G synonymous_variant 0.17
rpoC 765580 c.2211G>C synonymous_variant 0.17
rpoC 765583 c.2214G>C synonymous_variant 0.17
rpoC 765613 p.His748Gln missense_variant 0.16
rpoC 765625 c.2256C>G synonymous_variant 0.14
rpoC 765628 c.2259G>C synonymous_variant 0.14
rpoC 765631 p.Asp754Glu missense_variant 0.14
rpoC 765658 c.2289C>T synonymous_variant 0.15
rpoC 765700 c.2331T>C synonymous_variant 0.19
rpoC 765734 c.2365T>C synonymous_variant 0.15
rpoC 765739 c.2370G>T synonymous_variant 0.17
rpoC 765751 c.2382C>G synonymous_variant 0.17
rpoC 765753 p.Asp795Ala missense_variant 0.17
rpoC 765772 c.2403C>G synonymous_variant 0.19
rpoC 765784 c.2415C>G synonymous_variant 0.19
rpoC 765793 c.2424C>G synonymous_variant 0.18
rpoC 765796 c.2427C>T synonymous_variant 0.17
rpoC 765811 c.2442T>G synonymous_variant 0.14
rpoC 765826 c.2457T>C synonymous_variant 0.12
rpoC 765835 c.2466C>T synonymous_variant 0.12
rpoC 766426 c.3057C>T synonymous_variant 0.18
rpoC 766447 c.3078T>C synonymous_variant 0.13
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 776100 p.Thr794Ile missense_variant 1.0
mmpL5 776182 p.Asp767Asn missense_variant 1.0
mmpS5 778851 p.Ala19Ser missense_variant 0.11
mmpS5 779615 c.-710C>G upstream_gene_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781649 c.90T>C synonymous_variant 0.12
rpsL 781736 c.177T>C synonymous_variant 0.12
rplC 800738 c.-71T>C upstream_gene_variant 0.17
rplC 800747 c.-62C>G upstream_gene_variant 0.19
rplC 800771 c.-38C>T upstream_gene_variant 0.17
rplC 800806 c.-3G>C upstream_gene_variant 0.14
rplC 800807 c.-2C>T upstream_gene_variant 0.14
rplC 800808 c.-1A>C upstream_gene_variant 0.14
rplC 800815 c.7C>A synonymous_variant 0.14
rplC 800820 c.12G>A synonymous_variant 0.14
rplC 800829 c.21C>G synonymous_variant 0.14
rplC 800844 c.36T>C synonymous_variant 0.13
rplC 800856 c.48A>G synonymous_variant 0.14
rplC 800865 c.57A>G synonymous_variant 0.14
rplC 800867 p.Ser20Asn missense_variant 0.14
fbiC 1304724 c.1794A>G synonymous_variant 0.14
fbiC 1304727 c.1797A>G synonymous_variant 0.13
fbiC 1304742 c.1812T>C synonymous_variant 0.12
fbiC 1304748 c.1818T>C synonymous_variant 0.12
fbiC 1304754 c.1824G>A synonymous_variant 0.12
fbiC 1304757 c.1827A>G synonymous_variant 0.12
fbiC 1304778 c.1848T>C synonymous_variant 0.12
fbiC 1304832 c.1902C>A synonymous_variant 0.12
fbiC 1304835 c.1905G>C synonymous_variant 0.18
fbiC 1304844 c.1914C>A synonymous_variant 0.16
fbiC 1304847 c.1917C>G synonymous_variant 0.16
fbiC 1304853 c.1923C>G synonymous_variant 0.16
fbiC 1304869 c.1939C>T synonymous_variant 0.15
fbiC 1304893 p.Gly655Ser missense_variant 0.15
fbiC 1304901 c.1971C>A synonymous_variant 0.17
fbiC 1304907 c.1977C>G synonymous_variant 0.12
fbiC 1304910 c.1980G>C synonymous_variant 0.12
fbiC 1304925 c.1995G>C synonymous_variant 0.14
fbiC 1304928 c.1998T>C synonymous_variant 0.14
fbiC 1304934 c.2004C>A synonymous_variant 0.14
fbiC 1304937 c.2007G>C synonymous_variant 0.14
fbiC 1304943 c.2013C>T synonymous_variant 0.14
fbiC 1304944 c.2014C>T synonymous_variant 0.14
fbiC 1304955 c.2025G>A synonymous_variant 0.14
fbiC 1304958 c.2028T>G synonymous_variant 0.14
fbiC 1304967 c.2037G>C synonymous_variant 0.15
fbiC 1304970 c.2040G>C synonymous_variant 0.15
fbiC 1304991 c.2061G>A synonymous_variant 0.13
fbiC 1304995 c.2065T>C synonymous_variant 0.2
fbiC 1305012 c.2082G>C synonymous_variant 0.21
fbiC 1305015 c.2085G>C synonymous_variant 0.21
fbiC 1305021 c.2091C>A synonymous_variant 0.19
Rv1258c 1406760 c.580_581insC frameshift_variant 1.0
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrl 1475483 n.1826C>T non_coding_transcript_exon_variant 0.14
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.14
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.16
rrl 1475599 n.1942A>G non_coding_transcript_exon_variant 0.27
rrl 1475608 n.1951T>C non_coding_transcript_exon_variant 0.31
rrl 1475638 n.1981C>T non_coding_transcript_exon_variant 0.26
rrl 1475642 n.1985T>C non_coding_transcript_exon_variant 0.28
rrl 1475657 n.2000A>G non_coding_transcript_exon_variant 0.28
rrl 1475659 n.2002G>T non_coding_transcript_exon_variant 0.31
rrl 1475766 n.2109G>A non_coding_transcript_exon_variant 0.16
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.12
rrl 1476297 n.2640C>T non_coding_transcript_exon_variant 0.12
rrl 1476299 n.2642C>T non_coding_transcript_exon_variant 0.13
inhA 1674461 p.Lys87Arg missense_variant 0.15
inhA 1674471 c.270G>T synonymous_variant 0.17
inhA 1674480 c.279T>C synonymous_variant 0.2
inhA 1674486 c.285T>C synonymous_variant 0.2
inhA 1674489 c.288G>T synonymous_variant 0.17
inhA 1674504 c.303C>G synonymous_variant 0.14
inhA 1674542 p.Ala114Glu missense_variant 0.12
inhA 1674546 c.345T>C synonymous_variant 0.13
inhA 1674561 c.360C>T synonymous_variant 0.12
inhA 1674870 c.669T>C synonymous_variant 0.12
inhA 1674879 c.678T>C synonymous_variant 0.13
inhA 1674882 c.681G>C synonymous_variant 0.13
inhA 1674900 c.699G>A synonymous_variant 0.12
inhA 1674903 c.702T>C synonymous_variant 0.12
inhA 1674904 p.Ala235Pro missense_variant 0.12
rpsA 1833667 c.126C>G synonymous_variant 0.15
rpsA 1833703 c.162C>T synonymous_variant 0.13
rpsA 1833724 c.183C>G synonymous_variant 0.17
rpsA 1833727 c.186G>C synonymous_variant 0.14
rpsA 1833745 c.204G>C synonymous_variant 0.14
rpsA 1833760 c.219C>T synonymous_variant 0.14
rpsA 1833793 c.252C>T synonymous_variant 0.15
rpsA 1833811 c.270G>T synonymous_variant 0.14
rpsA 1834177 c.636A>C synonymous_variant 1.0
rpsA 1834222 c.681T>C synonymous_variant 0.12
rpsA 1834231 c.690T>G synonymous_variant 0.12
rpsA 1834249 c.708T>C synonymous_variant 0.14
rpsA 1834294 c.753G>T synonymous_variant 0.13
rpsA 1834303 c.762T>C synonymous_variant 0.12
rpsA 1834369 c.828C>G synonymous_variant 0.14
rpsA 1834375 c.834G>A synonymous_variant 0.14
rpsA 1834396 c.855G>C synonymous_variant 0.13
rpsA 1834411 c.870T>C synonymous_variant 0.14
rpsA 1834417 c.876G>C synonymous_variant 0.13
rpsA 1834423 c.882G>C synonymous_variant 0.13
rpsA 1834435 c.894G>C synonymous_variant 0.16
rpsA 1834451 c.910T>C synonymous_variant 0.15
rpsA 1834468 c.927A>G synonymous_variant 0.15
rpsA 1834474 c.933C>G synonymous_variant 0.15
rpsA 1834489 c.948T>C synonymous_variant 0.15
rpsA 1834495 c.954G>A synonymous_variant 0.15
rpsA 1834498 c.957C>T synonymous_variant 0.17
rpsA 1834528 c.987T>C synonymous_variant 0.16
rpsA 1834546 c.1005T>C synonymous_variant 0.16
rpsA 1834555 c.1014T>C synonymous_variant 0.16
rpsA 1834633 c.1092A>G synonymous_variant 0.14
rpsA 1834636 c.1095C>G synonymous_variant 0.14
rpsA 1834639 c.1098T>C synonymous_variant 0.14
tlyA 1917972 c.33A>G synonymous_variant 1.0
katG 2154724 p.Arg463Leu missense_variant 1.0
katG 2155316 p.Ile266Val missense_variant 0.15
katG 2155683 p.Lys143Asn missense_variant 0.13
PPE35 2167926 p.Leu896Ser missense_variant 1.0
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
pepQ 2860468 c.-50A>G upstream_gene_variant 0.2
ribD 2986709 c.-130C>A upstream_gene_variant 0.15
Rv2752c 3064530 c.1662G>C synonymous_variant 0.15
Rv2752c 3064539 c.1653T>C synonymous_variant 0.15
Rv2752c 3064551 c.1641C>G synonymous_variant 0.15
Rv2752c 3064554 c.1638C>T synonymous_variant 0.17
Rv2752c 3064560 c.1632C>G synonymous_variant 0.17
Rv2752c 3064563 c.1629A>G synonymous_variant 0.15
Rv2752c 3064566 c.1626G>C synonymous_variant 0.15
Rv2752c 3064584 c.1608G>C synonymous_variant 0.13
Rv2752c 3064590 c.1602C>T synonymous_variant 0.13
Rv2752c 3064596 c.1596G>C synonymous_variant 0.14
Rv2752c 3064599 c.1593A>G synonymous_variant 0.17
Rv2752c 3064602 c.1590T>C synonymous_variant 0.17
Rv2752c 3064608 c.1584G>C synonymous_variant 0.15
Rv2752c 3064612 p.Ile527Gly missense_variant 0.15
Rv2752c 3064617 c.1575T>C synonymous_variant 0.15
Rv2752c 3064624 c.1567_1568insCA frameshift_variant 0.15
Rv2752c 3064627 p.Asn522Ser missense_variant 0.15
Rv2752c 3064640 c.1552T>C synonymous_variant 0.13
Rv2752c 3064643 p.Ser517Ala missense_variant 0.13
Rv2752c 3064650 c.1542G>A synonymous_variant 0.13
Rv2752c 3064653 c.1539A>C synonymous_variant 0.13
Rv2752c 3064659 c.1533G>C synonymous_variant 0.14
Rv2752c 3064663 p.Lys510Arg missense_variant 0.14
Rv2752c 3064674 c.1518C>G synonymous_variant 0.17
Rv2752c 3064677 c.1515A>G synonymous_variant 0.17
Rv2752c 3064704 c.1488T>G synonymous_variant 0.18
ald 3086788 c.-32T>C upstream_gene_variant 1.0
ald 3087311 c.492C>A synonymous_variant 0.15
fbiD 3339184 p.Lys23Glu missense_variant 0.25
Rv3083 3448337 c.-167C>G upstream_gene_variant 0.14
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
Rv3236c 3612813 p.Thr102Ala missense_variant 1.0
rpoA 3878271 c.237T>C synonymous_variant 0.14
rpoA 3878276 c.232C>T synonymous_variant 0.14
rpoA 3878284 p.Glu75Ala missense_variant 0.14
rpoA 3878292 c.216T>C synonymous_variant 0.14
rpoA 3878298 c.210A>G synonymous_variant 0.14
rpoA 3878304 c.204G>C synonymous_variant 0.14
rpoA 3878313 c.195G>C synonymous_variant 0.14
rpoA 3878322 c.186A>G synonymous_variant 0.14
rpoA 3878331 c.177A>G synonymous_variant 0.14
rpoA 3878334 c.174T>C synonymous_variant 0.14
rpoA 3878337 c.171T>C synonymous_variant 0.12
rpoA 3878346 c.162T>C synonymous_variant 0.14
clpC1 4040162 c.543G>C synonymous_variant 0.23
clpC1 4040165 c.540G>C synonymous_variant 0.23
clpC1 4040171 c.534C>G synonymous_variant 0.21
clpC1 4040200 c.505T>C synonymous_variant 0.18
clpC1 4040201 c.504C>G synonymous_variant 0.18
clpC1 4040207 c.498T>G synonymous_variant 0.19
clpC1 4040213 c.490_492delTCTinsAGC synonymous_variant 0.19
clpC1 4040222 c.483G>A synonymous_variant 0.19
clpC1 4040225 c.480A>C synonymous_variant 0.19
clpC1 4040228 c.477G>C synonymous_variant 0.19
clpC1 4040231 c.474C>T synonymous_variant 0.19
clpC1 4040237 c.468C>T synonymous_variant 0.21
clpC1 4040243 c.462C>G synonymous_variant 0.2
clpC1 4040249 c.456A>G synonymous_variant 0.21
clpC1 4040258 c.447G>A synonymous_variant 0.21
clpC1 4040267 c.438A>G synonymous_variant 0.23
clpC1 4040273 c.432T>C synonymous_variant 0.25
clpC1 4040277 c.427_428delTCinsAG synonymous_variant 0.25
clpC1 4040279 c.426C>G synonymous_variant 0.27
clpC1 4040284 c.421C>T synonymous_variant 0.27
clpC1 4040324 c.381G>C synonymous_variant 0.18
clpC1 4040330 c.375C>G synonymous_variant 0.16
clpC1 4040342 c.363C>G synonymous_variant 0.18
embC 4240771 c.909G>T synonymous_variant 0.18
embC 4240780 c.918T>C synonymous_variant 0.17
embC 4240786 c.924C>T synonymous_variant 0.17
embC 4240789 c.927T>C synonymous_variant 0.18
embC 4240811 p.Phe317Leu missense_variant 0.17
embC 4240825 c.963G>A synonymous_variant 0.15
embC 4240831 c.969T>G synonymous_variant 0.15
embC 4240867 c.1005T>C synonymous_variant 0.12
embC 4240870 c.1008T>C synonymous_variant 0.12
embC 4240873 c.1011C>G synonymous_variant 0.14
embC 4240879 c.1017G>C synonymous_variant 0.15
embC 4240880 p.Ala340Thr missense_variant 0.15
embC 4240885 c.1023T>C synonymous_variant 0.12
embC 4240886 p.Ile342Val missense_variant 0.12
embC 4241182 c.1320G>C synonymous_variant 0.11
embC 4241215 c.1353C>G synonymous_variant 0.13
embC 4241230 c.1368A>G synonymous_variant 0.14
embC 4241248 c.1386G>C synonymous_variant 0.15
embC 4241251 c.1389T>C synonymous_variant 0.15
embC 4241254 c.1392C>G synonymous_variant 0.15
embC 4241256 p.Arg465Thr missense_variant 0.15
embC 4241268 p.Val469Ala missense_variant 0.17
embC 4241272 c.1410A>G synonymous_variant 0.17
embC 4241275 c.1413A>G synonymous_variant 0.18
embC 4241279 p.Val473Ile missense_variant 0.18
embC 4241287 c.1425G>A synonymous_variant 0.25
embC 4241288 p.Ile476Leu missense_variant 0.25
embC 4241301 p.Ala480Val missense_variant 0.15
embC 4241314 c.1452G>A synonymous_variant 0.15
embC 4241319 p.Pro486Leu missense_variant 0.15
embC 4241326 c.1464T>C synonymous_variant 0.13
embC 4241329 c.1467T>C synonymous_variant 0.13
embC 4241332 c.1470T>C synonymous_variant 0.12
embC 4241338 c.1476C>G synonymous_variant 0.11
embC 4241341 p.Phe493Leu missense_variant 0.12
embC 4241344 c.1482G>C synonymous_variant 0.12
embC 4241347 c.1485C>T synonymous_variant 0.12
embC 4241374 c.1512T>G synonymous_variant 0.12
embC 4241380 c.1518A>C synonymous_variant 0.12
embC 4241392 c.1530G>C synonymous_variant 0.12
embC 4241394 p.Lys511Arg missense_variant 0.12
embC 4241407 c.1545A>G synonymous_variant 0.14
embC 4241411 p.Ile517Leu missense_variant 0.14
embC 4241419 c.1557C>T synonymous_variant 0.14
embC 4242266 p.Arg802Cys missense_variant 0.2
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4243460 c.228C>T synonymous_variant 1.0
embB 4247497 c.984T>C synonymous_variant 0.17
embB 4247512 c.999T>C synonymous_variant 0.14
embB 4247539 c.1026T>C synonymous_variant 0.13
embB 4247542 c.1029C>G synonymous_variant 0.13
embB 4247544 p.Ser344Thr missense_variant 0.13
embB 4247579 p.Ala356Ile missense_variant 0.12
embB 4247587 c.1074G>A synonymous_variant 0.12
embB 4247608 c.1095G>C synonymous_variant 0.18
embB 4247611 c.1098G>C synonymous_variant 0.18
embB 4247629 c.1116C>A synonymous_variant 0.16
embB 4247632 c.1119C>G synonymous_variant 0.16
embB 4247635 c.1122G>A synonymous_variant 0.15
embB 4247638 c.1125G>C synonymous_variant 0.15
embB 4247646 p.Glu378Ala missense_variant 0.16
embB 4247656 c.1143A>G synonymous_variant 0.15
embB 4247657 p.Pro382Ala missense_variant 0.14
embB 4247662 c.1149C>G synonymous_variant 0.14
embB 4247684 c.1171T>C synonymous_variant 0.12
aftB 4267647 p.Asp397Gly missense_variant 1.0
aftB 4268779 p.Gly20Arg missense_variant 0.25
ethA 4327481 c.-8G>A upstream_gene_variant 1.0
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0
gid 4407620 p.Tyr195His missense_variant 1.0
gid 4407927 p.Glu92Asp missense_variant 1.0