Rv1630 - c.933C>G


Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
28 Sensitive 30 RR-TB 81 HR-TB 60 MDR-TB 8 Pre-XDR-TB 2 XDR-TB 85 Other
lineage Counts
lineage Count
lineage4.9 68
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage2.1;lineage4.9 6
M.canetti;lineage2.1;lineage4 1
M.canetti;lineage2.1;lineage4.9 24
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.1.2.1 15
lineage4.3.4.2.1 7
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage2.2.1 13
La1.6;La3;lineage4.9 2
lineage4.6.2.2 5
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
La3;M.canetti;lineage2.1;lineage4.9 12
La1.2 2
lineage3 9
lineage4.1.1.3 4
lineage4.3.2 1
M.canetti;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.2.2;lineage6.2 2
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1 1
lineage4.6.1.2 5
lineage2.2 2
lineage4.2.2.2 1
lineage4.3.3 1
lineage1.1.1.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
lineage4.3.4.1 2
La3;lineage4.9 5
lineage4.1.1.1 2
lineage3;lineage4 1
M.canetti;lineage2.1;lineage3 1
La1;lineage4.9 1
lineage4.1.2.1;lineage4.4.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La3;M.canetti;lineage4.9 2
La3;lineage2.1;lineage4.9 1
lineage2.2.2 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.1.2.1.1 1
lineage6.1.3 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4 2
lineage4.4.1.1.1 3
lineage4.8.1 2
lineage1.2.1.2.1 1
M.canetti;lineage2.1;lineage6.3 1
lineage1.1.2;lineage4 1
lineage4.6.1.1 1
La1.7.1 1
lineage4.2;lineage4.8.1;lineage4.9 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
La1.7;lineage4.9 2
3
lineage4.2;lineage4.9 3
M.canetti;lineage2.2 3
M.canetti;lineage4.9 5
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage3.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage1.1 1
lineage3.1.2.1 1
La1.8.1 2
lineage5.1.1 1
lineage4.2.1 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.5 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage6 1
La1.3 1
lineage2.2.1;lineage3;lineage4 1
lineage2.2.1;lineage4 1
lineage1.1.1 1
lineage4.1.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.1.2.1;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2;lineage4 1
lineage2.2.1.1 1
lineage4.6.3;lineage4.9 1
lineage4.4.1.1 1
lineage4.1.2.1;lineage4.4.1.1 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage4.8 1
spoligotype Counts
spoligotype Count
None 294
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11252736 Other lineage4.9 None
SRR1181403 Other lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR4821143 Other lineage4.9 None
ERR3797080 Sensitive lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
SRR3675269 RR-TB lineage4.9 None
SRR1169249 Other lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR4769508 RR-TB lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR161034 Other lineage4.3.4.2.1 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR2509673 Other lineage2.2.1 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR4769418 Other La1.2 None
ERR4821053 Other lineage3 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR5917710 Other lineage4.1.2.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR6359069 Sensitive lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786526 Other lineage4.1 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR13861500 RR-TB lineage4.9 None
SRR1049581 MDR-TB lineage4.6.1.2 None
ERR8976043 HR-TB lineage2.2 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR7821163 Other lineage2.2.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR13861332 Other lineage4.9 None
SRR13861381 HR-TB lineage4.9 None
SRR13861400 Other lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1172885 HR-TB lineage4.9 None
SRR13861168 RR-TB lineage4.9 None
SRR6046376 Other lineage3 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR176643 Other La3;lineage4.9 None
SRR6325447 HR-TB lineage4.1.1.1 None
SRR1173740 Other lineage3;lineage4 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR23961549 Other La1.2 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
ERR3283018 HR-TB lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR473334 HR-TB lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR212033 Other lineage4.9 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
ERR4818536 Other lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4769550 Sensitive La1;lineage4.9 None
ERR867570 RR-TB lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR4815471 Sensitive lineage4.9 None
SRR1180137 Other lineage2.2.1 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR3468607 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4819357 Sensitive lineage4.9 None
SRR1049673 Pre-XDR-TB lineage3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR2515228 Sensitive lineage2.2.1 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR1183049 RR-TB lineage2.2 None
ERR5162090 RR-TB lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2693228 RR-TB lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4816964 Sensitive lineage4.9 None
ERR212114 Other lineage4.3.4.2.1 None
SRR1169306 Other La3;lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR11465665 Other lineage4.1.1.3 None
ERR4816551 HR-TB lineage4.1.1.3 None
SRR22424787 Sensitive lineage4.9 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819933 Sensitive lineage4.9 None
ERR9787153 Other lineage6.1.3 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR4821276 Sensitive lineage3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786525 Other lineage4 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR30049957 Sensitive lineage4.1.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR2229143 RR-TB lineage4.9 None
SRR13861510 Other lineage4.9 None
SRR1510066 Other lineage1.2.1.2.1 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
SRR29097066 Sensitive lineage4.9 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR7240492 HR-TB La1.7.1 None
SRR5709967 MDR-TB lineage2.2.1 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4819383 RR-TB lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR867573 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786843 Other None
ERR4769442 Sensitive lineage4.9 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6044815 Other lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769530 RR-TB lineage4.9 None
SRR1640750 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1140736 Other lineage4.1.2.1 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1140716 Other lineage3 None
SRR1173170 Other lineage4.9 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1175052 HR-TB lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR1165506 Other lineage4.1.2.1 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6046839 Other lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR8665994 Other lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1166821 Other lineage4.1.2.1 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
SRR1049672 Other lineage3 None
ERR3077978 Other lineage1.1 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR3797023 HR-TB La1.8.1 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR751345 Other lineage5.1.1 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
ERR6359074 HR-TB lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR6044942 HR-TB lineage4.9 None
ERR990545 Other lineage3 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR13423544 Other lineage4.5 None
ERR3283044 Other lineage4 None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
ERR3283032 Other lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR9787336 RR-TB lineage6 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4769552 Sensitive La1.3 None
ERR4596910 Sensitive lineage4.9 None
SRR25827605 Pre-XDR-TB lineage2.2.1;lineage3;lineage4 None
SRR29096387 Sensitive M.canetti;lineage4.9 None
SRR1791696 Other La1.8.1 None
ERR6358951 Sensitive lineage4.9 None
SRR15315797 RR-TB lineage2.2.1;lineage4 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1023509 Other lineage4.9 None
SRR6325442 HR-TB lineage4.1.1;lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR176751 Other lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
ERR502470 RR-TB lineage4.9 None
SRR29126406 Sensitive lineage2.2.1 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR29017081 Sensitive lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1062918 Other lineage3 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR11252664 Other lineage2.2.1 None
ERR11252612 Other La3;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR212001 HR-TB None
SRR1173770 Other lineage4.9 None
SRR1173281 Other lineage3 None
SRR1173453 Other lineage4.4.1.1 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR11342693 MDR-TB lineage4.8.1 None
SRR3675243 Other lineage4.9 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1167384 Other La3;lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR12015084 Other lineage4.8 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818710 Sensitive lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None