EBG00000313339 - n.2240T>C
Drug resistance types
104 Sensitive
94 RR-TB
51 HR-TB
88 MDR-TB
60 Pre-XDR-TB
2 XDR-TB
358 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage3 | 64 |
| lineage3.1.2.1 | 3 |
| 18 | |
| lineage4.1.1.3 | 15 |
| lineage4.8 | 31 |
| lineage4.2.2.2 | 6 |
| lineage4 | 35 |
| lineage4.9 | 153 |
| La1.7.X-unk4 | 1 |
| La1.8.1 | 14 |
| lineage4.1.2.1 | 41 |
| lineage4.4.1.1 | 18 |
| lineage2.2.1 | 81 |
| lineage4.9;La1.8.1 | 1 |
| La1.2 | 2 |
| La1.3 | 4 |
| lineage4.9;La1.3 | 3 |
| lineage1.1.3.3 | 2 |
| lineage2.2.2 | 8 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.7;lineage4.3.4.2 | 1 |
| lineage4.7 | 7 |
| lineage4.3.4.2 | 3 |
| lineage4.3.2 | 3 |
| lineage1.2.2.2 | 7 |
| lineage1.1.1.1 | 3 |
| lineage4.6.5 | 4 |
| lineage1.2.1.2.1 | 4 |
| lineage4.1.1.2 | 4 |
| lineage5.1.1 | 1 |
| lineage4.3.4.2.1 | 13 |
| lineage4.6 | 2 |
| lineage4.1.1 | 10 |
| lineage3.1.1 | 14 |
| lineage4.3.1.1 | 4 |
| lineage3.1.3 | 5 |
| lineage6 | 3 |
| lineage4.3.3 | 26 |
| lineage2.2 | 4 |
| lineage4.1.2 | 6 |
| lineage1.2.1.2 | 2 |
| lineage2.2.1.1 | 6 |
| lineage4.3.2.1 | 5 |
| lineage4.4.1.1.1 | 4 |
| lineage4.6.1.2 | 5 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.9;lineage2.2.1 | 1 |
| La1.6 | 1 |
| lineage4.8.1 | 3 |
| lineage4.6.1.1 | 5 |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 1 |
| La2 | 1 |
| lineage4.4.2 | 5 |
| lineage4.3.4.1 | 7 |
| La1.4 | 1 |
| lineage4.5 | 6 |
| lineage4.2.2 | 1 |
| lineage4.6.2.2 | 6 |
| lineage4.4.1.2 | 1 |
| La1.7.1 | 3 |
| lineage1.1.1 | 4 |
| lineage3.1.2 | 5 |
| lineage1.1.2 | 11 |
| lineage1.2.2 | 1 |
| lineage3.1.2.2 | 4 |
| lineage4.1 | 3 |
| lineage1.2.1.1 | 2 |
| lineage4.8.2 | 2 |
| lineage5 | 2 |
| lineage3.1 | 2 |
| lineage4.1.3 | 1 |
| lineage4;lineage2 | 1 |
| lineage1 | 2 |
| lineage4.1.1.3.1 | 2 |
| lineage4;lineage3 | 1 |
| lineage1.2.2.1 | 1 |
| lineage1.1.3.1 | 3 |
| lineage6.2.1 | 1 |
| lineage6.3.1 | 2 |
| lineage6.1.3 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.2.1 | 4 |
| lineage4.3.1 | 1 |
| lineage4.2.1.1 | 2 |
| lineage4.9.1 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 757 |
Geographic prevalence
Country level data for this variant is available for 42 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR4821519 | Other | lineage3 | gb | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR3283021 | HR-TB | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4822150 | Other | lineage4.8 | gb | ERR4821718 | Sensitive | lineage4.2.2.2 | gb | ERR3283013 | MDR-TB | lineage4 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3439265 | Other | lineage4.9 | None | ERR3439441 | Other | La1.8.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR4187652 | Other | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR4024892 | Sensitive | lineage4.1.2.1 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | ERR4187671 | Other | lineage4.9;La1.8.1 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4457908 | Sensitive | lineage4.1.2.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4627369 | Other | La1.8.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769436 | Other | La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769480 | Other | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769495 | Other | La1.3 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796577 | MDR-TB | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4798823 | HR-TB | lineage4 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4800197 | HR-TB | None | ERR5866570 | Pre-XDR-TB | lineage2.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR5908124 | Other | lineage4.8 | None | ERR6197021 | MDR-TB | lineage4.7;lineage4.3.4.2 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6197022 | Other | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197032 | Other | lineage4.9 | None | ERR6197034 | Other | lineage4.9 | None | ERR6197033 | Other | lineage4.7 | None | ERR6197036 | Other | lineage4 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6197041 | MDR-TB | lineage4.3.4.2 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6865855 | Sensitive | lineage4.1.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR736837 | Other | lineage4.9 | None | ERR7362041 | MDR-TB | lineage1.2.2.2 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR22250223 | HR-TB | lineage1.2.1.2.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR909753 | Other | lineage5.1.1 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR9117699 | Other | lineage4.1.2.1 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117725 | Other | lineage4.1.1 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9117763 | HR-TB | lineage3 | None | ERR9117781 | Other | lineage3.1.3 | None | ERR9117788 | Other | lineage3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9119120 | Other | lineage4.8 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786705 | Sensitive | lineage4.1.2.1 | None | ERR9787033 | Sensitive | lineage6 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR9787336 | Other | lineage6 | None | ERR9811805 | MDR-TB | lineage4.8 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR10315584 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049672 | Other | lineage3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR10869254 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11349159 | MDR-TB | lineage2.2.2 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140736 | RR-TB | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR11567803 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173404 | Sensitive | lineage4.6.1.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1173182 | Other | lineage4.6.1.1 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173740 | Other | None | SRR1173770 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1173834 | Other | lineage4.6.1.1 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175304 | MDR-TB | lineage4.3.3 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181130 | Other | lineage4.1.1.3 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1184012 | Other | lineage4.1.1.3 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1196582 | Other | lineage4.9 | None | SRR11972327 | Pre-XDR-TB | lineage2.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR12006547 | Sensitive | lineage1.2.1.2.1 | None | SRR13888750 | Other | La2 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR15368751 | Sensitive | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR16156775 | Other | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR1792025 | Other | La1.8.1 | None | SRR1792012 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792024 | Other | La1.8.1 | None | SRR18002888 | RR-TB | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002884 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002926 | Other | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002991 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18213726 | Other | lineage3 | None | SRR18715102 | MDR-TB | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18213687 | Sensitive | lineage3 | None | SRR18213721 | Other | lineage4.8 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18213738 | Other | lineage3 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR19304095 | Other | lineage4.1.2.1 | None | SRR19304094 | Other | lineage6 | None | SRR20632814 | Sensitive | lineage4 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR21469200 | Other | La1.7.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21240161 | Sensitive | lineage4.1.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR22048484 | Sensitive | lineage4.8 | None | SRR21469202 | Other | La1.7.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175174 | Pre-XDR-TB | lineage2.2.1 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR22424727 | MDR-TB | lineage3.1.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR4815104 | Other | lineage4.8 | None | ERR4815262 | Sensitive | lineage4.9 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | ERR4815193 | MDR-TB | lineage4.8 | None | SRR3675474 | Other | lineage4.1.1 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | SRR1723899 | Sensitive | lineage4.5 | cn | SRR6046668 | Sensitive | lineage1.1.2 | gb | ERR4815278 | Other | lineage4.8 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4815777 | Other | lineage4.9 | None | ERR4815310 | Other | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4814415 | Other | lineage3.1.1 | None | SRR6046508 | Sensitive | lineage3.1.2.2 | gb | SRR6045056 | Other | lineage2.2.1 | gb | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814690 | Sensitive | lineage2.2.1 | None | ERR4814623 | Other | lineage4.8 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814714 | Other | lineage3 | None | ERR4815471 | Other | lineage4.9 | None | ERR1750889 | Other | lineage4.4.1.1 | None | ERR171135 | Other | lineage2.2.1 | za | ERR4814745 | Other | lineage4.6.5 | None | ERR1750909 | RR-TB | lineage4.1.1.2 | None | ERR1750907 | RR-TB | None | SRR3675234 | Other | None | ERR1750908 | Sensitive | lineage4 | None | ERR4815502 | Other | lineage4.1 | None | ERR1750916 | Other | lineage2.2.1.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4814821 | Other | lineage2.2.1 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4814841 | Other | lineage4.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4815534 | Other | lineage4 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4815550 | Other | lineage4 | None | ERR4814976 | Other | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4815836 | Other | lineage4.8.2 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR4815919 | Other | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4815956 | Other | lineage1.1.2 | None | ERR1949965 | Sensitive | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2027230 | Other | lineage4.2.2.2 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4817367 | Sensitive | lineage4.9 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816470 | Other | lineage3 | None | ERR4816283 | Other | lineage4.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4817110 | Other | lineage4.1.1.3 | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR4817070 | Other | lineage1.1.2 | None | ERR4816417 | Other | lineage4.9 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4817109 | Other | lineage3 | None | ERR216978 | Sensitive | lineage4.3.4.2.1 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4817189 | Other | lineage4.7 | None | ERR4817522 | Sensitive | lineage4.1.1.3 | None | ERR4816677 | Other | lineage4.5 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR176817 | Sensitive | lineage4.3.4.2.1 | mw | ERR4816756 | RR-TB | None | ERR4816803 | Sensitive | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4817434 | Other | lineage3 | None | ERR4816907 | Other | lineage1.1.1 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4816883 | Other | lineage4.5 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4815815 | Sensitive | lineage4 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR3275321 | Sensitive | lineage3.1.1 | nl | ERR4817735 | Other | lineage4.8 | None | ERR4818988 | Other | lineage1 | None | ERR2512986 | Other | lineage3 | None | ERR4817853 | Other | lineage4.8.1 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2513589 | Other | lineage3.1.3 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR4036003 | Sensitive | lineage4.4.1.1.1 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | ERR4818126 | RR-TB | lineage1 | None | ERR3275190 | Other | lineage3 | nl | ERR2515055 | Other | lineage3 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4818831 | Other | lineage3 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4818272 | Other | lineage4.3.2 | None | SRR5818677 | Sensitive | lineage1.1.2 | dj | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818904 | Other | lineage4.8 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818370 | Other | lineage4.1.1 | None | ERR2513259 | Other | lineage3 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR2513273 | Other | lineage4.1.2.1 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818556 | Other | lineage3 | None | ERR2509886 | RR-TB | lineage3 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR4818561 | HR-TB | lineage4 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR5007165 | MDR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | ERR4818952 | Other | lineage3 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR1750931 | Sensitive | lineage4.1.2.1 | za | ERR4817568 | Other | lineage4.1.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR3276144 | Other | lineage3 | nl | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819192 | Other | lineage3 | None | ERR2513743 | Other | lineage4.1.2 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4819203 | RR-TB | lineage1.2.2.1 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4820290 | Other | lineage3 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR2513924 | RR-TB | lineage4.8 | None | ERR4819307 | RR-TB | lineage4 | None | SRR5153833 | Other | lineage2.2.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819462 | Other | lineage4 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4820742 | Other | lineage4.3.4.2.1 | None | ERR4819503 | Other | lineage3 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820397 | Other | lineage4.9 | None | ERR4820777 | Other | lineage4.1.2.1 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4820478 | Other | lineage3.1.3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR2514645 | Other | lineage4.3.4.1 | None | SRR6152838 | Other | lineage2.2.1.1 | ca | ERR2514834 | Other | lineage4.7 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR1023509 | Other | None | ERR2514692 | Other | None | SRR6153166 | Other | lineage1.2.1.2.1 | ca | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4820130 | Other | lineage3 | None | ERR4819933 | Other | lineage4.9 | None | SAMN02567682 | Other | lineage4.6.1.1 | ug | ERR4820107 | RR-TB | None | ERR4820005 | Sensitive | lineage3 | None | ERR4820030 | Other | lineage4.9 | None | ERR4820073 | Sensitive | lineage4.9 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR4820161 | Other | lineage3 | None | ERR4820193 | Other | lineage3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR502525 | Sensitive | lineage6.2.1 | gh | ERR502522 | Other | lineage6.3.1 | gh | ERR1873455 | Pre-XDR-TB | lineage2.2.1 | za | ERR2446509 | Other | lineage3 | nl | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4821057 | HR-TB | lineage4 | None | SRR6045485 | Other | lineage4.9 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6045480 | Other | lineage4.1.1 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4821214 | RR-TB | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821276 | Other | lineage3 | None | ERR4821551 | Sensitive | lineage4.9 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821477 | Other | lineage4.8 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821310 | Other | lineage5 | None | ERR2446580 | Sensitive | lineage3.1.1 | nl | ERR4821409 | Other | lineage4.8 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4822176 | Other | lineage4.1.1.2 | None | ERR4822182 | Sensitive | lineage4.9 | None | ERR4821564 | Sensitive | lineage4.2.2.2 | None | ERR4822272 | Sensitive | lineage4.9 | None | SRR6046113 | Other | lineage4.1.1.3 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6046115 | Sensitive | lineage3 | None | SRR6045591 | Other | lineage4.1.2.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR5818464 | Other | lineage4.9 | None | SRR6045705 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045778 | Other | lineage3.1 | None | SRR5818624 | Sensitive | lineage3 | None | SRR5818685 | Sensitive | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR5818684 | Other | lineage4.2.2.2 | None | SRR6044817 | Other | lineage3 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6045928 | Other | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR6045124 | Other | lineage4.9 | None | SRR6045024 | Other | lineage4.1.1.2 | None | SRR6046159 | Other | lineage4.8.2 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6044936 | Other | lineage4 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6045110 | Other | lineage3 | None | SRR6046173 | Other | lineage3 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR6045178 | Other | lineage3 | None | SRR6046020 | Other | lineage3 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045248 | Other | lineage3.1.1 | None | SRR6045222 | Other | lineage4.1.2.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045321 | Other | lineage1.1.3.1 | None | SRR6046050 | Other | lineage4.3.3 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6046246 | Other | lineage3 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046291 | Other | lineage3 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046359 | Other | lineage4.7 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR6046385 | Other | lineage4.9 | None | ERR2179662 | Sensitive | lineage4.5 | cn | ERR4829240 | HR-TB | lineage4.1.1 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR4828811 | Other | lineage4.1.1 | None | ERR4830856 | MDR-TB | lineage4.4.1.1 | None | ERR4830887 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830888 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830892 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046433 | Other | lineage3 | None | SRR6046442 | Other | lineage3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046607 | Other | lineage3 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046517 | Other | lineage4.8 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR6046729 | Other | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046737 | Other | lineage4.9 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046739 | Other | lineage1.1.2 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046815 | Other | lineage3 | None | SRR6153150 | Other | lineage3.1.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR3077969 | Other | La1.3 | None | ERR4816569 | Sensitive | lineage4.3.3 | gb | ERR4814905 | Sensitive | lineage4.8 | gb | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR502470 | RR-TB | lineage4.9 | None | ERR4812328 | Other | lineage4.3.3 | pe | ERR485006 | HR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR4829817 | Sensitive | lineage4.3.3 | it | ERR502479 | RR-TB | lineage4.9 | None | ERR502523 | Other | lineage6.3.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR4812495 | Other | lineage4.1.2.1 | pe | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816800 | Other | lineage4.8 | gb | ERR3132117 | MDR-TB | lineage1.2.2.2 | None | SRR7131004 | Other | lineage4.6.2.2 | None | ERR5087846 | Other | La1.8.1 | None | ERR4817948 | Other | lineage3 | gb | ERR5087486 | Other | La1.8.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131114 | Other | lineage4.1.2 | None | SRR7131068 | Other | lineage4.8 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7131158 | HR-TB | lineage4.1.1 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7517755 | HR-TB | lineage1.2.1.2.1 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR8600288 | Other | La1.8.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR8649119 | Other | lineage4.6 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | SRR9971185 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | SRR7851312 | Other | La1.2 | None | SRR9971230 | Pre-XDR-TB | lineage4.3.3 | None | DRR185000 | Other | lineage1.1.1.1 | None | DRR184932 | Other | lineage2.2.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR036207 | Other | lineage4.9 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR038289 | Other | lineage4.3.3 | None | ERR10762318 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR1063855 | Other | lineage4 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR10796586 | Other | lineage4.9 | None | ERR10796590 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796615 | Other | lineage4 | None | ERR10796611 | Other | lineage4.9 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR10796627 | Other | lineage4 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR10796635 | Other | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None |
|---|
