lineage | Count |
---|---|
lineage4.9 | 12 |
lineage4.1.2.1 | 5 |
lineage4 | 35 |
lineage4.1.1 | 1 |
9 | |
lineage4.3.3 | 2 |
lineage3 | 5 |
lineage2.2.1 | 4 |
lineage4.8 | 5 |
lineage1.1.2 | 1 |
lineage4.3.4.2.1 | 1 |
lineage2.2 | 3 |
lineage5.2 | 2 |
lineage5.1.1 | 1 |
lineage4.4.1.2 | 1 |
lineage4.4.1.1;lineage1.2.2.1 | 1 |
lineage5.1.2 | 1 |
lineage1.1.3.2 | 1 |
spoligotype | Count |
---|---|
None | 90 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675527 | RR-TB | lineage4.9 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | SRR3675574 | HR-TB | None | SRR3675571 | HR-TB | None | ERR1034791 | RR-TB | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR3275190 | Other | lineage3 | nl | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4818582 | Sensitive | lineage1.1.2 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR2514692 | Other | None | ERR4819198 | Other | lineage2.2.1 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6045706 | Sensitive | lineage4 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6046737 | Other | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | SRR6046815 | Other | lineage3 | None | ERR2446509 | Other | lineage3 | nl | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6045327 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR349265 | Sensitive | lineage4 | None | ERR12015084 | Other | lineage4.8 | None | ERR11465714 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | ERR323115 | Sensitive | lineage4 | None | ERR12015086 | Other | lineage4.8 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363498 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4178226 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4798431 | HR-TB | None | ERR12015085 | Other | lineage4.8 | None | ERR6358951 | HR-TB | lineage4 | None | SRR16156775 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786076 | Sensitive | lineage3 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR26399255 | Sensitive | lineage2.2.1 | None | SRR16157123 | Other | lineage4.9 | None |
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