EBG00000313325 - n.799C>T
Drug resistance types
0 Sensitive
46 RR-TB
14 HR-TB
76 MDR-TB
31 Pre-XDR-TB
0 XDR-TB
569 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 31 |
| lineage4.9 | 388 |
| lineage4.8 | 25 |
| lineage2.2.1 | 81 |
| lineage4.3 | 3 |
| lineage4.4.1.1 | 6 |
| lineage4.4.2 | 4 |
| lineage2.2;lineage4.9 | 1 |
| lineage3 | 26 |
| lineage4.3.4.1 | 4 |
| lineage4.3.3 | 13 |
| lineage4.3.4.2.1 | 7 |
| lineage4.3.3;lineage4.9 | 2 |
| lineage1.1.3.3 | 1 |
| lineage4.3.2 | 3 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.1.1.3 | 6 |
| lineage4.5 | 1 |
| lineage4.2.1 | 13 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.6.2.2 | 4 |
| lineage1.1.3.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage3.1.1 | 3 |
| lineage4.1.2.1;lineage4.9 | 2 |
| lineage2;lineage4 | 1 |
| lineage2.2.2 | 7 |
| lineage1.2.1.2 | 2 |
| lineage4.6.1.2 | 5 |
| lineage2.2.1.1 | 5 |
| lineage2.2;lineage4 | 1 |
| lineage1.1.1 | 3 |
| lineage4.2.1.1 | 3 |
| lineage6.1.2 | 1 |
| lineage4.4 | 1 |
| lineage1.2.2 | 1 |
| lineage4.3.4.2 | 4 |
| lineage5 | 1 |
| La1.8.1 | 8 |
| lineage4.3.2.1 | 3 |
| lineage1.2.2.2 | 3 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage3;lineage4 | 1 |
| lineage1.1.1.1 | 2 |
| lineage4.1.1.3.1 | 2 |
| lineage4.7 | 3 |
| 1 | |
| lineage4.6.1.1 | 2 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.1.3 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.1.1.1 | 2 |
| La2 | 1 |
| La1.3 | 4 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.6.5 | 1 |
| lineage4.2.2.2 | 4 |
| La1.7.X-unk4 | 1 |
| lineage4.2.2 | 1 |
| lineage4.9.1 | 1 |
| lineage5.1.1 | 2 |
| La1.4 | 1 |
| La1.2 | 2 |
| lineage1.1.2 | 2 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.8.1 | 2 |
| lineage4.6 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage4.1.2 | 3 |
| lineage3.1.2.1 | 3 |
| La1.6 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4 | 2 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3.1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 736 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2027257 | Other | lineage4.1.2.1 | None | SRR1183302 | Other | lineage4.9 | None | SRR1180017 | Other | lineage4.9 | None | ERR5908124 | Other | lineage4.8 | None | SRR1183603 | Other | lineage4.9 | None | ERR4820959 | Other | lineage4.1.2.1 | None | SRR7069946 | Other | lineage4.8 | None | SRR18002907 | MDR-TB | lineage2.2.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR1180774 | Other | lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR1208612 | Other | lineage4.9 | None | SRR2101087 | Other | lineage4.4.2 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR5153833 | Other | lineage2.2.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR5818460 | Other | lineage4.9 | None | ERR4821731 | Other | lineage3 | gb | ERR10796556 | Other | lineage4.3.4.1 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR7645927 | Other | lineage4.8 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR1183097 | Other | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR1183227 | Other | lineage4.9 | None | SRR1183362 | Other | lineage4.9 | None | SRR1183445 | Other | lineage4.9 | None | SRR1183456 | Other | lineage4.9 | None | SRR1183517 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1208639 | Other | lineage4.9 | None | SRR5818445 | Other | lineage4.9 | None | SRR1181223 | Other | lineage4.9 | None | SRR1183061 | Other | lineage4.9 | None | SRR1183678 | Other | lineage4.9 | None | SRR1180686 | Other | lineage4.9 | None | SRR1180657 | Other | lineage4.9 | None | ERR10796615 | Other | lineage4.3.3;lineage4.9 | None | SRR1180717 | Other | lineage4.9 | None | SRR5818386 | Other | lineage4.9 | None | SRR1182880 | Other | lineage4.9 | None | SRR1183067 | Other | lineage4.9 | None | ERR4798769 | Other | lineage1.1.3.3 | None | SRR1183712 | Other | lineage4.9 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR10380127 | Other | lineage4.3.3 | None | SRR11342689 | Other | lineage4.1.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR1183149 | Other | lineage4.9 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR1183335 | Other | lineage4.9 | None | SRR1183435 | Other | lineage4.9 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR1183716 | Other | lineage4.9 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR4820030 | Other | lineage4.9 | None | SRR1208565 | Other | lineage4.9 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180061 | Other | lineage4.9 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818462 | Other | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | SRR1180751 | Other | lineage4.9 | None | ERR9117805 | Other | lineage4.3.2 | None | SRR1181597 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR1182951 | Other | lineage4.9 | None | SRR1182990 | Other | lineage4.9 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR10796588 | Other | lineage4.3.3 | None | SRR1182876 | Other | lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | SRR1182953 | Other | lineage4.9 | None | SRR1183018 | Other | lineage4.9 | None | SRR1180192 | Other | lineage4.9 | None | SRR1208768 | Other | lineage4.9 | None | ERR10796593 | Other | lineage4.3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183548 | Other | lineage4.9 | None | SRR1183268 | Other | lineage4.9 | None | SRR1182976 | Other | lineage4.9 | None | SRR1180073 | Other | lineage4.9 | None | SRR1183193 | Other | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR5818441 | Other | lineage4.9 | None | ERR4818831 | Other | lineage3 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR1180459 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180612 | Other | lineage4.9 | None | SRR1183270 | Other | lineage4.9 | None | SRR1180617 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR1183290 | Other | lineage4.9 | None | SRR1180624 | Other | lineage4.9 | None | SRR1181592 | Other | lineage4.9 | None | SRR1183091 | Other | lineage4.9 | None | SRR1183093 | Other | lineage4.9 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR1180669 | Other | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1181372 | Other | lineage4.9 | None | SRR1183128 | Other | lineage4.9 | None | SRR1183698 | Other | lineage4.9 | None | SRR1183518 | Other | lineage4.9 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR1181386 | Other | lineage4.9 | None | SRR1183520 | Other | lineage4.9 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | SRR1181229 | Other | lineage4.9 | None | SRR1182928 | Other | lineage4.9 | None | SRR1183132 | Other | lineage4.9 | None | ERR10796577 | Other | lineage4.9 | None | SRR7070144 | Other | lineage4.8 | None | SRR1183373 | Other | lineage4.9 | None | SRR19303918 | HR-TB | lineage1.2.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR5818469 | Other | lineage4.9 | None | SRR1180046 | Other | lineage4.9 | None | SRR1180495 | Other | lineage4.9 | None | SRR1183076 | Other | lineage4.9 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR1183121 | Other | lineage4.9 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR1180052 | Other | lineage4.9 | None | SRR1181277 | Other | lineage4.9 | None | SRR1183511 | Other | lineage4.9 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR1183192 | Other | lineage4.9 | None | SRR1183334 | Other | lineage4.9 | None | SRR1183687 | Other | lineage4.9 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1183402 | Other | lineage4.9 | None | SRR1182992 | Other | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR1180801 | Other | lineage4.9 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | SRR7131196 | Other | lineage4.8 | None | SRR1183418 | Other | lineage4.9 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR1181267 | Other | lineage4.9 | None | SRR1183702 | Other | lineage4.9 | None | SRR3675557 | Other | lineage4.9 | None | DRR185048 | Other | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7070521 | Other | lineage4.2.1.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4816692 | Other | lineage4.1.2.1 | None | SRR1182883 | Other | lineage4.9 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR19304094 | Other | lineage6.1.2 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1180115 | Other | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1183327 | Other | lineage4.9 | None | ERR4818126 | Other | lineage1.2.2 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR1183020 | Other | lineage4.9 | None | SRR5818458 | Other | lineage4.9 | None | SRR1208741 | Other | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816967 | Other | lineage5 | None | ERR3468613 | Other | La1.8.1 | None | SRR6982141 | Other | lineage4.3.3 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR3675582 | Other | lineage4.9 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR1180204 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR1181193 | Other | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR1182885 | Other | lineage4.9 | None | SRR1180731 | Other | lineage4.9 | None | SRR1183285 | Other | lineage4.9 | None | SRR1183500 | Other | lineage4.9 | None | ERR4812763 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR1202375 | Other | lineage4.9 | None | SRR1208368 | Other | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | SRR5818391 | Other | lineage4.9 | None | ERR270771 | HR-TB | lineage3 | None | SRR5818402 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7755652 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR1181377 | Other | lineage4.9 | None | SRR1181281 | Other | lineage4.9 | None | SRR1182965 | Other | lineage4.9 | None | SRR1180822 | Other | lineage4.9 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR1208744 | Other | lineage4.9 | None | SRR5818437 | RR-TB | lineage4.9 | None | SRR19303815 | Other | lineage4.8 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR1180803 | Other | lineage4.9 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4769493 | Other | lineage4.9 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR3468488 | Other | La1.8.1 | None | SRR6046250 | Other | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR7236330 | Other | La1.8.1 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR1181569 | Other | lineage4.9 | None | SRR1181580 | Other | lineage4.9 | None | SRR1183341 | Other | lineage4.9 | None | SRR1183495 | Other | lineage4.9 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR1183019 | Other | lineage4.9 | None | ERR10796568 | Other | lineage4.9 | None | SRR1183287 | Other | lineage4.9 | None | SRR1183669 | Other | lineage4.9 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR4033549 | Other | lineage2.2.2 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002964 | Other | lineage2.2.1 | None | ERR10796553 | Other | lineage4.9 | None | SRR1182982 | Other | lineage4.9 | None | SRR18002980 | Other | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180087 | Other | lineage4.9 | None | SRR1183129 | Other | lineage4.9 | None | SRR1180456 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR18002906 | Pre-XDR-TB | lineage2.2.1 | None | SRR1208377 | Other | lineage4.9 | None | SRR1208666 | Other | lineage4.9 | None | SRR1183707 | Other | lineage4.9 | None | SRR1183152 | Other | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR1208397 | Other | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR6046737 | Other | lineage4.9 | None | SRR1208777 | Other | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR9117760 | HR-TB | lineage4.3 | None | SRR5818452 | Other | lineage4.9 | None | SRR1208650 | Other | lineage4.9 | None | SRR1183450 | Other | lineage4.9 | None | SRR1183360 | Other | lineage4.9 | None | SRR1208653 | Other | lineage4.9 | None | SRR6046442 | Other | lineage3 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | SRR1180081 | Other | lineage4.9 | None | SRR1180154 | Other | lineage4.9 | None | ERR4821288 | Other | lineage4.7 | None | SRR1181358 | Other | lineage4.9 | None | SRR1180667 | Other | lineage4.9 | None | SRR1180782 | Other | lineage4.9 | None | ERR4817069 | RR-TB | None | SRR7070134 | Other | lineage3.1.1 | None | SRR1181577 | Other | lineage4.9 | None | SRR7068946 | Other | lineage4.6.2.2 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR10796635 | Other | lineage4.8 | None | SRR1173770 | Other | lineage4.9 | None | SRR11342646 | HR-TB | lineage3 | None | ERR1198990 | Other | lineage4.6.1.1 | ug | ERR5979407 | Other | lineage3 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR1183479 | Other | lineage4.9 | None | SRR1209049 | Other | lineage4.9 | None | SRR12420628 | MDR-TB | lineage2.2.1 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | SRR5818610 | Other | lineage3 | None | SRR1180164 | Other | lineage4.9 | None | SRR1180705 | Other | lineage4.9 | None | SRR1183277 | Other | lineage4.9 | None | SRR1183349 | Other | lineage4.9 | None | SRR1183432 | Other | lineage4.9 | None | SRR1181176 | Other | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR6044952 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR1180735 | Other | lineage4.9 | None | SRR1182920 | Other | lineage4.9 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR1183122 | Other | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | SRR1183453 | Other | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR1183523 | Other | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR1180559 | Other | lineage4.9 | None | SRR1180743 | Other | lineage4.9 | None | SRR1181573 | Other | lineage4.9 | None | SRR1208914 | Other | lineage4.9 | None | SRR1180113 | Other | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR1180111 | Other | lineage4.9 | None | SRR7070293 | Other | lineage4.8 | None | SRR6046020 | Other | lineage3 | None | SRR19304104 | Other | lineage4.8 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR5818426 | Other | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR1183710 | Other | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR1181268 | Other | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR1183323 | Other | lineage4.9 | None | SRR1183315 | Other | lineage4.9 | None | SRR1182882 | Other | lineage4.9 | None | ERR560439 | Other | lineage4.9 | None | SRR1183240 | Other | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR1182878 | Other | lineage4.9 | None | SRR1208676 | Other | lineage4.9 | None | SRR1180128 | Other | lineage4.9 | None | SRR1183482 | Other | lineage4.9 | None | SRR18002948 | Other | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR3675509 | Other | lineage4.9 | None | ERR3014599 | Pre-XDR-TB | lineage4.1.2.1 | tn | SRR5818464 | Other | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | SRR1183322 | Other | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR1183050 | Other | lineage4.9 | None | SRR1183224 | Other | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR1180555 | Other | lineage4.9 | None | SRR1183175 | Other | lineage4.9 | None | SRR1183610 | Other | lineage4.9 | None | SRR1183720 | Other | lineage4.9 | None | SRR1183403 | Other | lineage4.9 | None | ERR4814976 | Other | lineage4.9 | None | SRR1180668 | Other | lineage4.9 | None | ERR4820193 | Other | lineage3 | None | ERR5311077 | Other | La1.8.1 | None | SRR1180647 | Other | lineage4.9 | None | SRR1183461 | Other | lineage4.9 | None | SRR1180750 | Other | lineage4.9 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR1183098 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR2027230 | Other | lineage4.2.2.2 | None | SRR1208798 | Other | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | SRR7069648 | Other | lineage4.6.2.2 | None | SRR5818425 | Other | lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | SRR1183255 | Other | lineage4.9 | None | SRR1183538 | Other | lineage4.9 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR4769480 | Other | La1.3 | None | SRR1181422 | Other | lineage4.9 | None | SRR1183126 | Other | lineage4.9 | None | SRR1183339 | Other | lineage4.9 | None | SRR1180196 | Other | lineage4.9 | None | SRR1183681 | Other | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR1180047 | Other | lineage4.9 | None | SRR1183439 | Other | lineage4.9 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818409 | Other | lineage4.9 | None | ERR2514215 | Other | lineage2.2.1 | gb | SRR18003033 | Other | lineage2.2.1 | None | SRR1182909 | Other | lineage4.9 | None | SRR1183412 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1180213 | Other | lineage4.9 | None | ERR037504 | Other | lineage4.9.1 | None | SRR1183388 | Other | lineage4.9 | None | SRR1183472 | Other | lineage4.9 | None | ERR502517 | Other | lineage5.1.1 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR16278274 | Other | La1.4 | None | SRR1180125 | Other | lineage4.9 | None | SRR7070407 | Other | lineage4.1.2.1 | None | SRR5818408 | Other | lineage4.9 | None | SRR1180580 | Other | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | SRR1208460 | Other | lineage4.9 | None | SRR1208537 | Other | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR1183333 | Other | lineage4.9 | None | ERR10796566 | Other | lineage4.9 | None | SRR1183705 | Other | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4819491 | Other | lineage4.1.2.1 | None | SRR7069783 | Other | lineage4.1.2.1 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR19303899 | Other | lineage3 | None | SRR1181226 | Other | lineage4.9 | None | SRR1180100 | Other | lineage4.9 | None | SRR1180696 | Other | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR1181575 | Other | lineage4.9 | None | SRR1183288 | Other | lineage4.9 | None | SRR1180455 | Other | lineage4.9 | None | SRR5818440 | Other | lineage4.9 | None | SRR1183170 | Other | lineage4.9 | None | SRR7068927 | Other | lineage1.2.2.2 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR4769418 | Other | La1.2 | None | SRR1173281 | Other | lineage3 | None | SRR1180588 | Other | lineage4.9 | None | SRR1180813 | Other | lineage4.9 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR1180105 | Other | lineage4.9 | None | SRR1180119 | Other | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR7069391 | Other | lineage4.9 | None | SRR18002956 | Other | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | ERR10796599 | Other | lineage4.8 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR2513405 | Other | lineage2.2.1 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR1180025 | Other | lineage4.9 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR5818396 | Other | lineage4.9 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | SRR5818411 | RR-TB | lineage4.9 | None | ERR10796591 | Other | lineage4.9 | None | SRR5818423 | RR-TB | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819770 | Other | lineage4.8 | gb | SRR1173170 | Other | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1183524 | Other | lineage4.9 | None | SRR1183613 | Other | lineage4.9 | None | SRR1180209 | Other | lineage4.9 | None | SRR1180829 | Other | lineage4.9 | None | SRR1181191 | Other | lineage4.9 | None | SRR1182901 | Other | lineage4.9 | None | SRR1183068 | Other | lineage4.9 | None | ERR10796560 | Other | lineage4.9 | None | SRR1202569 | Other | lineage4.9 | None | SRR1208174 | Other | lineage4.9 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR1183109 | Other | lineage4.9 | None | SRR1183414 | Other | lineage4.9 | None | ERR4872193 | MDR-TB | lineage4.6 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR7069922 | Other | lineage2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR5818414 | Other | lineage4.9 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR1180239 | Other | lineage4.9 | None | ERR4818663 | Other | lineage3 | None | ERR2600562 | MDR-TB | lineage2.2.1;lineage4.8 | None | SRR1180724 | Other | lineage4.9 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | SRR1181233 | Other | lineage4.9 | None | SRR1183237 | Other | lineage4.9 | None | ERR4816702 | Other | lineage4.6.2.2 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR4812495 | Other | lineage4.1.2.1 | pe | SRR1181245 | Other | lineage4.9 | None | SRR1183321 | Other | lineage4.9 | None | SRR1202408 | Other | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR1181269 | Other | lineage4.9 | None | ERR4586795 | Other | La1.8.1 | None | ERR5865106 | MDR-TB | lineage4.2.1 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR1208465 | Other | lineage4.9 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR1208757 | Other | lineage4.9 | None | ERR10796640 | Other | lineage4.1.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR1182958 | Other | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR1181199 | Other | lineage4.9 | None | SRR1180114 | Other | lineage4.9 | None | SRR7755655 | Other | lineage4.1.2.1 | None | ERR6866241 | Other | lineage4.3.2 | None | SRR7131123 | Other | lineage4.8 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR5818456 | Other | lineage4.9 | None | SRR1208194 | Other | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | SRR1182925 | Other | lineage4.9 | None | SRR1180599 | Other | lineage4.9 | None | SRR1180738 | Other | lineage4.9 | None | SRR1183422 | Other | lineage4.9 | None | ERR10796632 | Other | lineage4.3.3 | None | SRR19303907 | Other | lineage4.8 | None | SRR1183214 | Other | lineage4.9 | None | SRR1183238 | Other | lineage4.9 | None | SRR1183306 | Other | lineage4.9 | None | SRR12062551 | Pre-XDR-TB | lineage2.2.1 | None | SRR1208353 | Other | lineage4.9 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR1208683 | Other | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR5818422 | Other | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR1183031 | Other | lineage4.9 | None | SRR1183190 | Other | lineage4.9 | None | SRR1183239 | Other | lineage4.9 | None | SRR1183281 | Other | lineage4.9 | None | SRR1183297 | Other | lineage4.9 | None | SRR1183394 | Other | lineage4.9 | None | SRR1183499 | Other | lineage4.9 | None | SRR7069314 | Other | lineage3 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR5163959 | Other | lineage4.9 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR6865446 | Other | lineage4.4.1.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | ERR3275190 | Other | lineage3 | nl | ERR4816322 | Other | lineage4.9 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | SRR1180482 | Other | lineage4.9 | None | SRR1180158 | Other | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR1183621 | Other | lineage4.9 | None | SRR1183674 | Other | lineage4.9 | None | ERR560438 | Other | lineage4.9 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | SRR1208532 | Other | lineage4.9 | None | SRR1183529 | Other | lineage4.9 | None | SRR7755657 | Other | lineage4.8 | None | ERR4819720 | Other | lineage3.1.2.1 | gb | ERR4820798 | Other | lineage3.1.2.1 | gb | SRR1180486 | Other | lineage4.9 | None | SRR1180094 | Other | lineage4.9 | None | SRR1180197 | Other | lineage4.9 | None | SRR5818404 | Other | lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | SRR7069473 | Other | lineage4.1.1.2 | None | SRR1181403 | Other | lineage4.9 | None | SRR1208436 | Other | lineage4.9 | None | ERR10796622 | Other | lineage4.8 | None | SRR1208342 | Other | lineage4.9 | None | SRR1208557 | Other | lineage4.9 | None | SRR1183168 | Other | lineage4.9 | None | SRR1180062 | Other | lineage4.9 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | SRR1183430 | Other | lineage4.9 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR1180440 | Other | lineage4.9 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR1180524 | Other | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR5818446 | Other | lineage4.9 | None | SRR1181398 | Other | lineage4.9 | None | SRR5818393 | Other | lineage4.9 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR1173719 | Other | lineage4.9 | None | SRR1181147 | Other | lineage4.9 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR3675565 | Other | lineage4 | None | SRR1183180 | Other | lineage4.9 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1183549 | Other | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR1181224 | Other | lineage4.9 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR1208487 | Other | lineage4.9 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR5818394 | Other | lineage4.9 | None | SRR1183069 | Other | lineage4.9 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR7131161 | Other | lineage4.8 | None | SRR7131068 | Other | lineage4.8 | None | SRR7069675 | Other | lineage3 | None | SRR19303784 | Other | lineage4.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR1183305 | Other | lineage4.9 | None | SRR1183213 | Other | lineage4.9 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796581 | Other | lineage4.1.2 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR7069158 | Other | lineage3 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1180048 | Other | lineage4.9 | None | ERR3077969 | Other | La1.3 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1181231 | Other | lineage4.9 | None | SRR1181490 | Other | lineage4.9 | None | SRR7645928 | Other | lineage4.7 | None | ERR4816009 | Other | lineage1.1.2 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1180020 | Other | lineage4.9 | None | SRR19303903 | Other | lineage2.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR1183225 | Other | lineage4.9 | None | SRR1180579 | Other | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR1180228 | Other | lineage4.9 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR4820290 | Other | lineage3 | None | SRR1183369 | Other | lineage4.9 | None | SRR1183185 | Other | lineage4.9 | None | SRR7236399 | Other | La1.8.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR2984782 | Pre-XDR-TB | lineage4.3.3 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR1181589 | Other | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | ERR6197032 | Other | lineage4.9 | None | SRR1180687 | Other | lineage4.9 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR1182923 | Other | lineage4.9 | None | SRR1182929 | Other | lineage4.9 | None | SRR1183057 | Other | lineage4.9 | None | SRR1183383 | Other | lineage4.9 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR1183684 | Other | lineage4.9 | None | ERR3797067 | Other | La1.8.1 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR3675513 | Other | lineage4.8 | None | SRR1180830 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR1183680 | Other | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR1183502 | Other | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | SRR1180597 | Other | lineage4.9 | None | SRR1180031 | Other | lineage4.9 | None | SRR1180578 | Other | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180241 | Other | lineage4.9 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR7617847 | Other | La1.8.1 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR1183304 | Other | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796634 | Other | lineage4.7 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | SRR7851312 | Other | La1.2 | None | SRR1183410 | Other | lineage4.9 | None | SRR5818385 | Other | lineage4.9 | None | ERR2984795 | Other | lineage4.8.1 | None | SRR1183617 | Other | lineage4.9 | None | SRR1183015 | Other | lineage4.9 | None | SRR1180240 | Other | lineage4.9 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | SRR22424905 | RR-TB | lineage4.9 | None | ERR867555 | Other | lineage3 | None |
|---|
