EBG00000313325 - n.799C>T
Drug resistance types
0 Sensitive
84 RR-TB
42 HR-TB
96 MDR-TB
47 Pre-XDR-TB
0 XDR-TB
510 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 62 |
| La1.3 | 5 |
| lineage4.9 | 109 |
| La1.8.1 | 8 |
| La1.2 | 2 |
| lineage4.9;La1.3 | 1 |
| lineage1.1.3.3 | 1 |
| lineage2.2.1 | 121 |
| lineage4.3.3 | 19 |
| lineage4.1.1.3 | 11 |
| lineage4 | 18 |
| lineage2.2.2 | 8 |
| lineage4.2.1 | 14 |
| lineage4.8 | 53 |
| lineage3 | 73 |
| lineage4.4.1.1 | 16 |
| lineage1.1.1.1 | 3 |
| lineage4.3.2 | 4 |
| lineage5.1.1 | 2 |
| lineage4.1.2 | 11 |
| lineage4.6.2.2 | 12 |
| lineage1.2.2.2 | 4 |
| lineage4.3 | 2 |
| lineage4.6 | 5 |
| lineage3.1.3 | 4 |
| lineage3.1.1 | 6 |
| lineage2.2.1.1 | 6 |
| lineage4.3.2.1 | 6 |
| lineage4.7 | 11 |
| lineage4.6.1.2 | 6 |
| lineage4.3.4.2.1 | 9 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| 12 | |
| lineage4.6.1.1 | 5 |
| lineage4.4.2 | 4 |
| La2 | 1 |
| La1.7.1 | 1 |
| La1.4 | 1 |
| lineage4.2.2.1 | 3 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.4 | 2 |
| lineage1.1.2 | 13 |
| lineage2.2 | 4 |
| lineage4.2.2 | 1 |
| lineage4.5 | 4 |
| lineage4.3.4.2 | 14 |
| lineage6 | 2 |
| lineage1.2.1.2 | 3 |
| lineage1.1.1 | 4 |
| lineage4.3.4.1 | 9 |
| lineage3.1.2 | 3 |
| lineage4.1.3 | 3 |
| lineage3.1 | 3 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage2.2.1;lineage1.1.1 | 1 |
| lineage1.1.3 | 3 |
| lineage4.3.3;lineage3 | 1 |
| lineage3.1.2.1 | 9 |
| lineage5 | 2 |
| lineage4.1.1 | 9 |
| lineage1.2.1.1 | 1 |
| lineage4.2.2.2 | 5 |
| lineage4.2.1.1 | 3 |
| lineage1.2.1.2.1 | 3 |
| lineage1 | 1 |
| La1.2.BCG | 1 |
| lineage4;lineage3 | 1 |
| lineage4.1.1.3.1 | 5 |
| lineage4.4.1.2 | 2 |
| lineage1.1.3.1 | 4 |
| lineage1.2.2 | 1 |
| La3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage2.1 | 1 |
| lineage4.8.2 | 2 |
| lineage3.1.2.2 | 3 |
| lineage4.6.5 | 1 |
| lineage4.1 | 1 |
| lineage4.8.1 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4.2.1;lineage2.2.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.3.4 | 1 |
| La1.7.X-unk4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 779 |
Geographic prevalence
Country level data for this variant is available for 129 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4769480 | Other | La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4586795 | Other | La1.8.1 | None | ERR4769418 | Other | La1.2 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4772215 | Other | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4798852 | Pre-XDR-TB | lineage2.2.1 | in | ERR5530526 | MDR-TB | lineage4.3.3 | None | ERR4800297 | Other | lineage4.1.1.3 | in | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4811708 | HR-TB | lineage4 | None | ERR4812495 | Other | lineage4.1.2.1 | pe | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR5865106 | MDR-TB | lineage4.2.1 | None | ERR5908124 | Other | lineage4.8 | None | ERR5979407 | Other | lineage3 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR6197030 | Other | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6197032 | Other | lineage4.9 | None | ERR6197036 | Other | lineage4 | None | ERR6197034 | Other | lineage4.9 | None | ERR6197040 | Other | lineage4.9 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR751345 | Other | lineage5.1.1 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR6866918 | Other | lineage4.1.2 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117759 | Other | lineage3 | None | ERR9117704 | Other | lineage4.6 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9117826 | Other | lineage3.1.3 | None | ERR9119120 | Other | lineage4.8 | None | ERR9119591 | MDR-TB | lineage4.6 | None | ERR9120135 | Pre-XDR-TB | lineage2.2.1 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | SRR10272566 | Other | lineage4.3.3 | None | SRR10315462 | RR-TB | lineage4.3.2.1 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10380127 | Other | lineage4.3.3 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315596 | RR-TB | lineage4.7 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049672 | Other | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR1140736 | RR-TB | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1173182 | Other | lineage4.6.1.1 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1172282 | Other | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1180446 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR13888750 | Other | La2 | None | SRR13986566 | Other | La1.7.1 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR16149133 | MDR-TB | lineage4.2.2.1 | None | SRR16156832 | RR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR16058205 | HR-TB | lineage2.2.1 | None | SRR16058726 | Other | lineage2.2.1 | None | SRR16149183 | MDR-TB | lineage4.2.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002892 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002888 | RR-TB | lineage2.2.1 | None | SRR18002926 | Other | lineage2.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002906 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002907 | MDR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002948 | Other | lineage2.2 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002997 | Other | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18003044 | MDR-TB | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18913779 | Other | lineage3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19303805 | Other | lineage4.8 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19303784 | Other | lineage4.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR19303815 | Other | lineage4.8 | None | SRR19303819 | Other | lineage4.6.2.2 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR19303907 | Other | lineage4.8 | None | SRR19303899 | Other | lineage3 | None | SRR19303903 | Other | lineage2.2.1 | None | SRR2101087 | Other | lineage4.4.2 | None | SRR19303916 | Other | lineage4.1.2.1 | None | SRR19303917 | Other | lineage2.2.1 | None | SRR19304094 | Other | lineage6 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR19303918 | HR-TB | lineage1.2.1.2 | None | SRR19304083 | Other | lineage4.4.1.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR21727888 | Other | lineage1.2.1.2 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR22175203 | Pre-XDR-TB | lineage2.2.1 | None | SRR22048478 | Other | lineage4.3.4.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR22424905 | RR-TB | lineage4.9 | None | ERR4815104 | Other | lineage4.8 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | ERR4815165 | Other | lineage4.1.2.1 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | ERR4815268 | Other | lineage4.8 | None | ERR4815204 | Other | lineage2.2.1.1 | gb | ERR4815613 | Other | lineage3 | None | ERR4815241 | Other | lineage3.1.2 | gb | ERR4815261 | Other | lineage4.8 | gb | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4815278 | Other | lineage4.8 | None | ERR4815310 | Other | None | ERR4814415 | Other | lineage3.1.1 | None | ERR4814438 | HR-TB | lineage4.1.2.1 | gb | ERR4814410 | Other | lineage2.2.1 | None | ERR4815427 | HR-TB | lineage3.1 | gb | ERR4815680 | Other | lineage1.1.2 | gb | ERR4815698 | RR-TB | lineage4.7 | None | ERR4815775 | Other | lineage4.3.4.2 | gb | ERR4814496 | RR-TB | lineage4.1.2 | None | SRR3675219 | Other | lineage4.9 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4812763 | Other | lineage2.2.1 | None | ERR4814671 | Other | lineage3 | gb | ERR4814700 | Other | lineage4.3.3 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4814730 | Other | lineage4.8 | gb | SRR3675227 | Other | lineage4.9 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4818401 | HR-TB | lineage2.2.1 | gb | ERR4815478 | RR-TB | lineage2.2.1;lineage1.1.1 | gb | ERR4814789 | Other | lineage3 | gb | ERR4814748 | Other | lineage4.8 | None | ERR4814763 | Other | lineage2.2.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4815496 | Other | lineage3 | gb | ERR4815499 | Other | lineage4.3.4.2 | None | ERR4814821 | Other | lineage2.2.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4814824 | Other | lineage3 | None | ERR4814874 | MDR-TB | lineage1.1.2 | None | ERR4814881 | Other | lineage2.2.1 | gb | ERR4814843 | Other | lineage1.1.3 | None | SRR3675265 | Other | lineage4 | None | ERR4814852 | Other | lineage4.1.2.1 | None | ERR4815738 | Other | lineage3 | None | ERR4814939 | Other | lineage4.3.3;lineage3 | gb | ERR4815550 | Other | lineage4 | None | ERR4814930 | Other | lineage4.4.1.1 | None | ERR4815556 | RR-TB | lineage3 | None | ERR4814954 | Other | lineage3.1 | gb | ERR4814976 | Other | lineage4.9 | None | ERR4815075 | MDR-TB | lineage3 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR4815005 | Other | lineage4.1.2.1 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4815079 | RR-TB | lineage3 | None | ERR1198990 | Other | lineage4.6.1.1 | ug | ERR4815849 | Other | lineage3.1.1 | None | ERR4816944 | RR-TB | lineage2.2 | None | SRR3675513 | Other | lineage4.8 | None | ERR2446456 | HR-TB | lineage4.4.1.1 | None | SRR3675509 | Other | lineage4.9 | None | ERR4815919 | Other | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816969 | Other | lineage4.8 | None | ERR4817466 | Other | lineage1.1.1 | gb | ERR4815869 | Other | lineage3 | gb | ERR4815901 | Other | lineage2.2 | None | ERR4815905 | Other | lineage1.2.2.2 | gb | ERR4815994 | Other | lineage3 | gb | ERR4816988 | Other | lineage3 | gb | ERR4816074 | Other | lineage1.2.2.2 | None | ERR4816009 | Other | lineage1.1.2 | None | ERR4816031 | Other | lineage4.3.3 | gb | ERR2027232 | Other | lineage4.3.4.2 | None | ERR4817342 | Other | lineage4.1.1 | None | ERR2027250 | Other | lineage3.1.2 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR2027230 | Other | lineage4.2.2.2 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4817349 | Other | lineage4.9 | None | ERR4816182 | Other | lineage3.1.2.1 | gb | ERR4816303 | Other | lineage4.1.1.3 | gb | SRR3675557 | Other | lineage4.9 | None | SRR3675565 | Other | lineage3 | None | ERR4817047 | Other | lineage4.2.2.1 | gb | ERR4817478 | Other | lineage3 | None | ERR4816231 | Other | lineage4 | None | ERR4816511 | Other | lineage3 | gb | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4816322 | Other | lineage4.9 | None | ERR4817475 | Other | lineage4.1.1.3 | gb | ERR4816417 | Other | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | ERR4816464 | Other | lineage3 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4817127 | Other | lineage4.1.2.1 | None | ERR4816510 | Other | lineage4.1.2.1 | None | ERR4817069 | RR-TB | None | ERR4816437 | Other | lineage3 | gb | ERR4817488 | Other | lineage4.3.4.2.1 | None | ERR4816493 | Other | lineage4.1.2.1 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4817175 | Other | lineage4.8 | None | ERR4816627 | Other | lineage2.2 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4816562 | Other | lineage4 | None | ERR4816569 | Other | lineage4.3.3 | gb | ERR4816571 | Other | lineage1.1.2 | None | ERR4816604 | RR-TB | lineage4.1.2 | None | ERR4817434 | Other | lineage3 | None | ERR4816699 | Other | lineage4.6 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | SRR5818386 | Other | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4816852 | Other | lineage4.9 | None | SRR5818426 | Other | None | ERR4816425 | Other | lineage2.2.2 | None | ERR4817665 | Other | lineage4.8 | None | ERR4818663 | Other | lineage3 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR4817730 | Other | lineage4.2.1.1 | gb | ERR4818696 | Other | lineage4.8 | None | ERR2512991 | Other | lineage1.2.1.2.1 | gb | ERR4817917 | Other | lineage2.2.1 | None | ERR4817826 | RR-TB | lineage4.5 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4817907 | Other | lineage3 | gb | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR4817926 | HR-TB | lineage4.6.2.2 | gb | ERR4817919 | Other | lineage4.3.4.1 | gb | ERR4819007 | Other | lineage2.2.1 | None | ERR4817948 | Other | lineage3 | gb | ERR2510759 | Other | lineage4.8 | it | ERR2513059 | Other | lineage4.1.1 | gb | ERR4818752 | Other | lineage3 | None | ERR2510768 | Other | lineage4.8 | it | ERR4819012 | Other | lineage1.1.2 | None | ERR2510765 | Pre-XDR-TB | lineage4.8 | None | ERR2513413 | Other | lineage3.1.2.1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR2510796 | HR-TB | lineage4.3.4.2 | it | ERR2510794 | Other | lineage4.3.4.2 | None | ERR2510804 | Other | lineage2.2.1 | None | ERR4818084 | Other | lineage3.1.1 | gb | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818176 | Other | lineage4.1.2.1 | None | ERR2512433 | Other | lineage3 | gb | ERR4818810 | Other | lineage2.2.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818121 | Other | lineage4.7 | gb | ERR4818825 | HR-TB | lineage4.1.2.1 | None | ERR4818187 | Other | lineage4.6.1.1 | gb | ERR4818173 | Other | lineage2.2.1 | None | ERR4818831 | Other | lineage3 | None | ERR4818192 | Other | lineage4.1.2.1 | gb | ERR4818261 | Other | lineage1.1.2 | None | ERR4818219 | Other | lineage4.3.2.1 | gb | ERR4818232 | Other | lineage4.1.2 | gb | ERR4818257 | Other | lineage4.1.2 | gb | ERR4818351 | Other | lineage1.1.3 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818874 | Other | lineage4.1.2.1 | gb | ERR4818890 | Other | lineage4.7 | None | ERR4818918 | Other | lineage1.1.2 | gb | ERR4818370 | Other | lineage4.1.1 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR4818432 | HR-TB | lineage4.5 | gb | ERR4819080 | Other | lineage4.1.2.1 | gb | ERR2513273 | Other | lineage4.1.2.1 | None | ERR4818509 | RR-TB | La1.2.BCG | gb | ERR2509886 | RR-TB | lineage3 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | ERR4818489 | Other | lineage1.1.3 | None | ERR4818565 | Other | lineage4.8 | None | ERR4818574 | Other | lineage6 | None | ERR2512841 | HR-TB | lineage2.2.1 | gb | ERR4817555 | RR-TB | lineage3 | None | ERR2512884 | Other | lineage4.6.2.2 | gb | SRR5007199 | Other | lineage4.1.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4819093 | Other | lineage4.3.3 | None | ERR2513589 | Other | lineage3.1.3 | None | ERR4817619 | Other | lineage4.1.2.1 | gb | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR5818458 | Other | None | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR4819119 | HR-TB | lineage1.2.1.2.1 | gb | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4819176 | Other | lineage3.1.1 | gb | ERR4819196 | Other | lineage4.1.1 | gb | ERR4819192 | Other | lineage3 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4819206 | Other | lineage4.8 | None | ERR4820275 | HR-TB | lineage4.4.1.2 | gb | ERR2513794 | Other | lineage4.8 | gb | ERR4820264 | Other | lineage1.1.2 | None | ERR4819262 | Other | lineage4.1.2.1 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | SRR5153833 | Other | lineage2.2.1 | None | ERR4820290 | Other | lineage3 | None | ERR2513903 | Other | lineage4.4.1.1 | gb | ERR2513910 | Other | lineage3 | gb | ERR4819314 | Other | lineage1.1.1 | None | ERR2514073 | Other | lineage4.1.1.3.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR2514173 | Other | lineage4.5 | gb | ERR4819458 | Other | lineage4.1.1.3.1 | gb | ERR4819456 | Other | lineage4.8 | None | ERR4820742 | Other | lineage4.3.4.2.1 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4819567 | Other | lineage2.2.1 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4819518 | Other | lineage4.1.1 | None | ERR4819524 | Other | lineage3 | None | ERR4819555 | Other | lineage4.8 | None | ERR4820369 | Other | lineage2.2.1 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4819615 | Other | lineage4.3.4.2.1 | None | ERR4820408 | Other | lineage4.1.2.1 | None | ERR2514389 | Other | lineage3 | None | ERR2514550 | MDR-TB | lineage3 | gb | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819720 | Other | lineage3.1.2.1 | gb | ERR2514515 | Other | lineage4.2.1 | None | ERR4819734 | RR-TB | lineage3 | gb | ERR4820478 | Other | lineage3.1.3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819766 | Other | lineage4.4.1.1 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR4819770 | Other | lineage4.8 | gb | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR2514613 | Other | lineage4.8 | gb | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR2514702 | Other | lineage4.1.2.1 | gb | ERR4820801 | Other | lineage1.2.2 | None | ERR4820889 | Other | lineage3 | gb | ERR4819863 | RR-TB | lineage4.9 | None | ERR1023509 | Other | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4819899 | Other | lineage3.1.2.1 | None | ERR2514834 | Other | lineage4.7 | None | ERR4820827 | Other | lineage4.1.2 | None | ERR4820030 | Other | lineage4.9 | None | ERR4820572 | Other | lineage1.2.1.2.1 | None | ERR4820586 | Other | lineage3 | gb | ERR4820026 | Other | lineage3 | None | ERR2515011 | Other | lineage4.1.2.1 | gb | ERR4819948 | Other | lineage4.4.1.1 | None | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR4819980 | Other | lineage4.1.2.1 | None | ERR4820833 | HR-TB | None | ERR4820057 | Other | lineage4.4.1.1 | gb | ERR4820846 | RR-TB | lineage4.6.2.2 | gb | ERR4820188 | Other | lineage3 | gb | ERR4820684 | Other | lineage3 | gb | ERR4820690 | Other | lineage4.1.1 | gb | ERR4820193 | Other | lineage3 | None | ERR4820130 | Other | lineage3 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4821802 | Other | La3 | gb | ERR4821020 | Other | lineage4.1.1.3.1 | None | ERR4821139 | Other | lineage4.8 | gb | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821167 | Other | lineage4.8 | gb | ERR4821172 | RR-TB | lineage4.9 | None | ERR4820907 | Other | lineage4.1.2.1 | gb | ERR4820926 | Other | lineage4.8 | gb | ERR4821054 | Other | lineage3 | None | SRR5818445 | Other | None | SRR6045480 | Other | lineage4.1.1 | None | ERR4821865 | Other | lineage2.2.1 | gb | ERR4821143 | RR-TB | lineage4.9 | None | SRR6046113 | Other | lineage4.1.1.3 | None | ERR270771 | HR-TB | lineage3 | None | ERR4821887 | Other | lineage4.1.2.1 | None | ERR4821331 | HR-TB | lineage4.8 | None | ERR4821907 | Other | lineage4.1.1.3 | gb | ERR4821198 | Other | lineage3 | gb | ERR4821263 | Other | lineage4.1.3 | gb | ERR4821286 | Other | lineage4.8 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821310 | Other | lineage5 | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4821337 | Other | lineage4.9 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4821410 | Other | lineage2.2.1 | gb | ERR4822021 | Other | lineage4.8 | gb | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4822110 | Other | lineage3.1.2.1 | None | ERR4821492 | HR-TB | lineage3 | None | ERR4822169 | Other | lineage4.1.1.3 | gb | ERR4822190 | Other | lineage1.1.3.1 | gb | ERR4822176 | Other | lineage4.1.1.2 | None | ERR4821550 | Other | lineage2.2.1 | None | ERR4821578 | Other | lineage4.1.2.1 | None | ERR4821572 | Other | lineage2.1 | None | ERR4821584 | Other | lineage4.8.2 | None | ERR4821579 | Other | lineage4.3.4.2 | gb | ERR4822222 | Other | lineage3.1.2.2 | None | ERR4822224 | HR-TB | lineage4.2.1 | None | ERR4821731 | Other | lineage3 | gb | ERR4821719 | Other | lineage3 | gb | ERR4821722 | Other | lineage2.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4821718 | Other | lineage4.2.2.2 | gb | ERR4821725 | Other | lineage4.8.2 | gb | SRR5818391 | Other | lineage4.9 | None | ERR4821761 | Other | lineage3 | gb | ERR4821769 | Other | lineage4.1.2.1 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR5818394 | Other | lineage4.9 | None | ERR4821736 | HR-TB | lineage2.2.1 | gb | ERR4821746 | Other | lineage4.4.1.1 | gb | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6045655 | Other | lineage4.1.1.3.1 | None | SRR5818385 | Other | lineage4.9 | None | SRR5818393 | Other | lineage4.9 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818411 | MDR-TB | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | SRR5818402 | Other | lineage4.9 | None | SRR5818396 | Other | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR5818409 | Other | lineage4.9 | None | SRR5818404 | Other | lineage4.9 | None | SRR5818440 | Other | lineage4.9 | None | SRR5818422 | Other | lineage4.9 | None | SRR5818423 | MDR-TB | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR5818437 | MDR-TB | lineage4.9 | None | SRR5818446 | Other | lineage4.9 | None | SRR5818441 | Other | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | SRR5818442 | Other | lineage4.9 | None | SRR5818456 | Other | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | SRR5818462 | Other | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR5818460 | Other | lineage4.9 | None | SRR5818457 | Other | lineage4.9 | None | SRR6045743 | Other | lineage3 | None | SRR6045749 | Other | lineage4.1.1 | gb | SRR5818469 | Other | lineage4.9 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818690 | Other | lineage4.2.2.2 | None | SRR5818610 | Other | lineage3 | None | SRR6044787 | Other | lineage4.4 | None | SRR6044769 | Other | lineage1.1.2 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6046020 | Other | lineage3 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045056 | Other | lineage2.2.1 | gb | SRR6045997 | Other | lineage3.1.3 | gb | SRR6046177 | Other | lineage3.1.2 | None | SRR6045321 | Other | lineage1.1.3.1 | None | SRR6045178 | Other | lineage3 | None | SRR6045261 | Other | lineage1.1.2 | gb | SRR6045295 | Other | lineage4.7 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR6045365 | Other | lineage3 | gb | ERR4829907 | HR-TB | lineage4.1.2.1 | it | SRR6046376 | Other | lineage3 | None | ERR2851354 | RR-TB | lineage4.9 | None | ERR4829289 | Other | lineage4.1.2.1 | None | ERR4829207 | Other | lineage2.2.1 | None | ERR4829359 | Other | lineage4.7 | None | ERR4829333 | RR-TB | lineage4 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR4828843 | MDR-TB | lineage4.2.2.2 | None | SRR6046433 | Other | lineage3 | None | SRR6046442 | Other | lineage3 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046497 | Other | lineage4.9 | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6046646 | Other | lineage4.7 | gb | SRR6152838 | Other | lineage2.2.1.1 | ca | SRR6046737 | Other | lineage4.9 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046790 | Other | lineage4.7 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR6397975 | Other | lineage4.1.2.1 | ca | ERR3077969 | Other | La1.3 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4872193 | MDR-TB | lineage4.6 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6896545 | Other | lineage4.9 | None | SAMN02567682 | Other | lineage4.6.1.1 | ug | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR2984782 | Pre-XDR-TB | lineage4.3.3 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR3014599 | Pre-XDR-TB | lineage4.1.2.1 | tn | ERR2984795 | Other | lineage4.8.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR3275190 | Other | lineage3 | nl | ERR3275941 | RR-TB | lineage4.3 | nl | SRR6982530 | Other | lineage1.2.2.1 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR7131161 | Other | lineage4.8 | None | SRR7131068 | Other | lineage4.8 | None | SRR7131109 | Pre-XDR-TB | lineage4.8 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7131075 | Other | lineage4.8 | None | SRR7131104 | HR-TB | lineage4.3.4.2 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131125 | Other | lineage2.2.1 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR7131221 | Other | lineage4.6.2.2 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131196 | Other | lineage4.8 | None | SRR7585435 | Other | lineage4.9 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR7131237 | Other | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR7131234 | Other | lineage4.9 | None | SRR7131288 | Other | lineage4.6.2.2 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR8600288 | Other | La1.8.1 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR7755652 | Pre-XDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR7765063 | Pre-XDR-TB | lineage4.8 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR7851312 | Other | La1.2 | None | DRR185024 | Other | lineage2.2.2 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR10796556 | Other | lineage4.3.4.1 | None | DRR185048 | Other | lineage2.2.1 | None | ERR037504 | Other | lineage4.9.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796569 | Other | lineage4.9 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796581 | HR-TB | lineage4.1.2 | None | ERR10796588 | Other | lineage4 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796590 | Other | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796597 | Other | lineage4 | None | ERR10796592 | Other | lineage4 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR10796599 | Other | lineage4 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796615 | Other | lineage4 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR10796629 | Other | lineage4 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796635 | Other | lineage4 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283053 | Other | lineage4.9 | None | ERR3439265 | Other | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR10796622 | Other | lineage4.8 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796627 | Other | lineage4 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR10796634 | Other | lineage4 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3797067 | Other | La1.8.1 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3468561 | HR-TB | lineage4.9 | None | ERR3468602 | Other | La1.8.1 | None | ERR3797035 | Other | lineage4.9 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR3797068 | Other | La1.8.1 | None | ERR400319 | Other | lineage4.8 | gb | ERR4132460 | MDR-TB | lineage2.2.1 | None | ERR4178161 | Other | lineage4.4.1.1 | None |
|---|
