EBG00000313339 - n.1168G>A
Drug resistance types
14 Sensitive
10 RR-TB
29 HR-TB
19 MDR-TB
20 Pre-XDR-TB
0 XDR-TB
82 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 21 |
| lineage4.1.2.1 | 6 |
| lineage4 | 6 |
| lineage4.9 | 32 |
| lineage3.1.2.1 | 2 |
| lineage1.1.2 | 4 |
| lineage4.5 | 1 |
| lineage4.1.1.3 | 4 |
| lineage4.6.2.2 | 1 |
| lineage1.1.3.1 | 2 |
| lineage4.3.3 | 6 |
| lineage2.2.2 | 9 |
| lineage2.2.1 | 19 |
| lineage4.4.1.1 | 5 |
| lineage4.3.2 | 2 |
| lineage1.1.1 | 3 |
| lineage4.3.4.2.1 | 2 |
| 7 | |
| lineage4.7 | 1 |
| La1.8.1 | 2 |
| lineage6.1.3 | 1 |
| lineage4.8 | 5 |
| lineage2.1 | 1 |
| lineage3.1.2.2 | 2 |
| lineage3.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| La1.3 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.2.1 | 1 |
| La1.2 | 2 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.9;La1.3 | 1 |
| lineage2.2 | 7 |
| lineage3.1.3 | 1 |
| lineage6 | 1 |
| lineage4.9;lineage2 | 1 |
| lineage4.4 | 1 |
| lineage1.2.1.2.1 | 1 |
| La1.4 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 174 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816001 | Other | lineage3 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4815550 | Other | lineage4 | None | ERR4814976 | Other | lineage4.9 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4816032 | Sensitive | lineage4.9 | None | ERR4816231 | Other | lineage4 | None | ERR4817070 | Other | lineage1.1.2 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4817109 | Other | lineage3 | None | ERR4816417 | Other | lineage4.9 | None | ERR4817504 | Sensitive | lineage4.1.1.3 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4817435 | Other | lineage1.1.3.1 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816619 | Sensitive | lineage3 | None | ERR4817434 | Other | lineage3 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR4816833 | Other | lineage4.1.1.3 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816868 | Other | lineage4.4.1.1 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | ERR3275190 | Other | lineage3 | nl | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | ERR4818831 | Other | lineage3 | None | ERR4817555 | RR-TB | lineage3 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818952 | Other | lineage3 | None | ERR4819524 | Other | lineage3 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR3276144 | Other | lineage3 | nl | SRR5074710 | Sensitive | lineage4.3.3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4820290 | Other | lineage3 | None | SRR5153833 | Other | lineage2.2.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4820404 | Other | lineage4.3.2 | None | ERR4820130 | Other | lineage3 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4820833 | HR-TB | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | ERR4820161 | Other | lineage3 | None | ERR4821288 | Other | lineage4.7 | None | ERR4820193 | Other | lineage3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR5382721 | Other | La1.8.1 | None | ERR2446509 | Other | lineage3 | nl | SRR6045496 | Other | lineage6.1.3 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4821477 | Other | lineage4.8 | None | ERR4821572 | Other | lineage2.1 | None | ERR4821438 | Other | lineage3 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR5818464 | Other | lineage4.9 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR6044904 | Other | lineage3 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045124 | Other | lineage4.9 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6046015 | Other | lineage4.9 | None | SRR6046442 | Other | lineage3 | None | ERR2851354 | RR-TB | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046612 | Other | lineage1.1.1.1 | None | ERR3077969 | Other | La1.3 | None | ERR4800231 | Pre-XDR-TB | lineage2.2.1 | in | SRR6046737 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR4814994 | HR-TB | lineage2.2.1 | gb | SRR6832644 | Other | lineage4.3.3 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR8600288 | Other | La1.8.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR7851312 | Other | La1.2 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR4821718 | Sensitive | lineage4.2.2.2 | gb | ERR3797074 | Sensitive | lineage4.9 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769495 | Other | La1.3 | None | ERR4800197 | HR-TB | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR6197040 | Other | lineage4.9 | None | ERR5864073 | MDR-TB | lineage2.2.1 | None | ERR5866451 | MDR-TB | lineage2.2 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | SRR1013553 | Pre-XDR-TB | lineage2.2 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | ERR9117826 | Other | lineage3.1.3 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9787336 | Other | lineage6 | None | ERR9117747 | HR-TB | lineage4.8 | None | SRR1013601 | HR-TB | lineage2.2.1 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1013617 | MDR-TB | None | SRR1048885 | MDR-TB | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR1048869 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048965 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048969 | MDR-TB | lineage2.2.2 | None | SRR1048982 | HR-TB | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1048886 | MDR-TB | lineage2.2 | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1049027 | Pre-XDR-TB | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR1172713 | MDR-TB | lineage4.4 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR12006547 | Sensitive | lineage1.2.1.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR11972237 | Sensitive | lineage1.1.2 | None | SRR11972283 | MDR-TB | lineage2.2.1 | None | SRR16149133 | MDR-TB | lineage4.2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR19303810 | Sensitive | lineage4.8 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | ERR4815278 | Other | lineage4.8 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR22528573 | Sensitive | lineage4.8 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | ERR4815310 | Other | None |
|---|
