lineage | Count |
---|---|
lineage4.9 | 54 |
lineage4.3.3 | 2 |
lineage4.8 | 8 |
lineage3 | 7 |
La1.2 | 1 |
lineage2.2.1 | 2 |
lineage2.2.1;lineage4.9 | 1 |
lineage4.1.1.1 | 1 |
lineage4.1.2.1 | 2 |
lineage2.2;lineage4.9 | 1 |
lineage4 | 3 |
lineage4.7 | 1 |
lineage1.1.1 | 1 |
lineage4.9;lineage7 | 1 |
lineage5.1.2 | 1 |
lineage4.9;lineage6.1.3 | 1 |
lineage2.2.1.2;lineage7 | 1 |
lineage4.1;lineage4.9 | 1 |
La1.6 | 1 |
lineage4.3.1;lineage4.9;lineage6 | 1 |
spoligotype | Count |
---|---|
None | 91 |
ID | Drug resistance | Lineage | Country iso2 | ERR6359069 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR19303869 | Sensitive | lineage4.8 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR4814934 | Other | lineage3 | gb | ERR363447 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6046737 | Other | lineage4.9 | None | ERR4816151 | Sensitive | lineage4.8 | None | SRR5341456 | Other | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | SRR21732230 | Sensitive | lineage3 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR26112719 | Other | lineage3 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR19304075 | Sensitive | lineage4.8 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR19324809 | Other | lineage3 | None | ERR6197031 | Sensitive | lineage4.7 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR19304097 | Sensitive | lineage4.8 | None | ERR978735 | Other | lineage4.8 | None | ERR373947 | Other | lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR29053353 | Other | lineage3 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR369162 | Other | lineage4.9 | None | SRR22048367 | Sensitive | lineage4.8 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR3675265 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR2513259 | Other | lineage3 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None |
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