lineage | Count |
---|---|
lineage4.9 | 65 |
lineage4.6.1.1 | 3 |
lineage4 | 18 |
9 | |
lineage3 | 6 |
lineage4.9;La1.3 | 1 |
lineage2.2.1.2 | 1 |
lineage2.2.1 | 3 |
lineage4.1.2.1 | 4 |
lineage4.3.4.2.1 | 3 |
lineage4.7 | 1 |
lineage4.4.1.1;lineage4.1.2.1 | 1 |
lineage4.8 | 3 |
lineage3.1.1 | 1 |
lineage4.9;lineage2.2 | 1 |
lineage2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2 | 1 |
lineage4.6.2.2 | 1 |
lineage4.2;La1.7 | 1 |
lineage2.1 | 1 |
lineage4;lineage2 | 1 |
lineage4.3.4.2 | 1 |
lineage1.1.1 | 1 |
lineage4.3.3 | 1 |
lineage1.1.3.1 | 1 |
spoligotype | Count |
---|---|
None | 131 |
ID | Drug resistance | Lineage | Country iso2 | ERR3797084 | Sensitive | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4 | None | ERR387051 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4798823 | HR-TB | lineage4 | None | ERR5863794 | MDR-TB | lineage2.2.1 | None | ERR6359070 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6359069 | Other | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR736837 | Other | lineage4.9 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049672 | Other | lineage3 | None | SRR1140736 | RR-TB | None | SRR1062928 | RR-TB | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173799 | MDR-TB | lineage3.1.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181368 | Other | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | SRR16157123 | Other | lineage4.9 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | ERR4815310 | Other | None | ERR4814639 | HR-TB | lineage4 | None | ERR4814748 | Other | lineage4.8 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR4815550 | Other | lineage4 | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675456 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | ERR4817204 | RR-TB | lineage4.9 | None | SRR3675555 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4818536 | Other | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | ERR552744 | Sensitive | lineage4.1.2.1 | de | ERR4819546 | HR-TB | lineage3 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341432 | HR-TB | lineage4 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341313 | HR-TB | None | ERR4819933 | Other | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4821276 | Other | lineage3 | None | ERR4821550 | Other | lineage2.2.1 | None | SRR6046737 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6982246 | Sensitive | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR067712 | HR-TB | lineage4 | None |
---|