Rv0667 - c.1809A>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
53 Sensitive
3 RR-TB
14 HR-TB
6 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 59 |
| lineage4.9;lineage7 | 3 |
| lineage2.2.1 | 4 |
| lineage4.1.2.1 | 2 |
| lineage2;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.8 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage3 | 4 |
| lineage4.3.3 | 1 |
| La1.8.1 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage1.1.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.7 | 1 |
| lineage4 | 1 |
| lineage1.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| 1 | |
| lineage2.2;lineage4.9 | 1 |
| lineage4.6.1.1 | 2 |
| lineage2.2.1.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 102 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR473334 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR5341373 | Other | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR387051 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR7240033 | Other | La1.8.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR552744 | Sensitive | lineage4.1.2.1 | de | SRR1180312 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR29231262 | Other | lineage1.1.2 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR1049672 | Other | lineage3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4821276 | Sensitive | lineage3 | None | SRR3675280 | RR-TB | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR4798823 | HR-TB | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR16157123 | Other | lineage4.9 | None | ERR4819933 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR6046737 | Other | lineage4.9 | None |
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